SMTL ID : 8trt.2 (1 other biounit)

Structure of the EphA2 CRD bound to FabS1CE_C1, monoclinic form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: T.132, S.133 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain B: T.203, S.205 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: S.157, N.198, K.207, D.209 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.207 NA.3: 1 residues within 4Å: Chain A: H.165 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bruce, H.A. et al., Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. (2024)

Release Date

2023-11-22

Peptides

S1CE variant of Fab C1 heavy chain: A
S1CE variant of Fab C1 light chain: B
Ephrin type-A receptor 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

S1CE variant of Fab C1 heavy chain

S1CE variant of Fab C1 light chain

Ephrin type-A receptor 2

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