SMTL ID : 8tv1.1

Structure of the EphA2 LBDCRD bound to FabS1C_L1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain A: D.224 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain B: P.112, T.200 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: K.159, V.185, Q.187, S.193 Chain B: Q.159, T.177, T.179 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:K.159, A:K.159, A:S.193, B:Q.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adams, J.J. et al., Synthetic Antibodies targeting EPHA2 Induce Diverse Signaling-Competent Clusters with Differential Activation. To be published

Release Date

2024-06-26

Peptides

S1C variant of Fab_L1 heavy chain: A
S1C variant of Fab_L1 light chain: B
Ephrin type-A receptor 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
C

S1C variant of Fab_L1 heavy chain

S1C variant of Fab_L1 light chain

Ephrin type-A receptor 2

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