SMTL ID : 8ty1.1

Cryo-EM structure of coagulation factor VIII bound to NB2E9

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

3 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.1: 3 residues within 4Å: Chain A: M.251, N.259, R.260 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA-MAN.2: 1 residues within 4Å: Chain A: N.945 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA-MAN.3: 5 residues within 4Å: Chain C: N.28, F.29, T.30, G.31, Y.32 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:Y.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Childers, K.C. et al., Structural basis for inhibition of coagulation factor VIII reveals a shared antigenic hotspot on the C1 domain. J.Thromb.Haemost. (2024)

Release Date

2023-09-13

Peptides

Coagulation factor VIII: A
NB2E9 light chain: B
NB2E9 heavy chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Coagulation factor VIII

NB2E9 light chain

NB2E9 heavy chain

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