SMTL ID : 8xlq.1

FGFR4 kinase domain with a dual-warhead covalent inhibitor CXF-007

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x 01: CXF007

01.1: 22 residues within 4Å: Chain A: L.31, E.33, C.35, V.39, R.41, K.61, E.78, M.82, I.92, V.106, V.108, E.109, C.110, A.111, A.112, G.114, R.174, N.175, L.177, A.187, D.188, F.189 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.31, A:I.92, A:V.108, A:L.177, A:A.187, A:D.188 Hydrogen bonds: A:R.41, A:A.111, A:A.111, A:A.111, A:R.174, A:D.188, A:D.188, A:D.188 pi-Cation interactions: A:R.174

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: H.285, A.286, Q.290 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.265, A:A.286, A:Q.290 Water bridges: A:R.265, A:A.287, A:A.287 Salt bridges: A:H.285 SO4.3: 5 residues within 4Å: Chain A: R.174, T.204, S.205, N.206, R.208 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.204, A:T.204, A:S.205, A:N.206, A:N.206, A:R.208 Water bridges: A:N.115 Salt bridges: A:R.174 SO4.4: 4 residues within 4Å: Chain A: R.121, R.124, G.245, S.246 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.246 Water bridges: A:R.121, A:R.121 Salt bridges: A:R.121, A:R.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X. et al., Design, synthesis, and biological evaluation of selective covalent inhibitors of FGFR4. Eur.J.Med.Chem. (2024)

Release Date

2024-03-27

Peptides

Fibroblast growth factor receptor 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fibroblast growth factor receptor 4

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