SMTL ID : 8y92.1

structure of NET-Atomoxetine in outward-open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x 01: (3R)-N-methyl-3-(2-methylphenoxy)-3-phenyl-propan-1-amine

01.1: 12 residues within 4Å: Chain A: F.72, A.73, D.75, A.145, V.148, G.149, Y.151, F.317, S.318, F.323, G.423, A.477 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.72, A:D.75, A:A.145, A:V.148, A:V.148, A:F.323, A:F.323, A:A.477 Hydrogen bonds: A:D.75, A:F.317 01.3: 12 residues within 4Å: Chain B: F.72, A.73, D.75, A.145, V.148, G.149, Y.151, F.317, S.318, F.323, S.419, G.423 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:V.148, B:V.148, B:F.323, B:F.323

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: N.78, Y.98, Q.314, S.318, S.354 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain B: N.78, Y.98, Q.314, S.318, S.354 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain B: G.71, F.72, V.74, D.418 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Dimerization and antidepressant recognition at noradrenaline transporter. Nature (2024)

Release Date

2024-05-29

Peptides

Sodium-dependent noradrenaline transporter: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Sodium-dependent noradrenaline transporter

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