SMTL ID : 8yfq.1

Cryo EM structure of Komagataella phaffii RNAPII-Rat1-Rai1 pre-termination complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
8 x ZN: ZINC ION
1 x MG: MAGNESIUM ION
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yanagisawa, T. et al., Structural basis of eukaryotic transcription termination by the Rat1 exonuclease complex. Nat Commun (2024)
Release Date
2024-09-25
Peptides
DNA-directed RNA polymerase subunit: A
DNA-directed RNA polymerase subunit beta: B
RNA polymerase II third largest subunit B44, part of central core: C
RNA polymerase II subunit B32: D
DNA-directed RNA polymerases I, II, and III subunit RPABC1: E
RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III: F
RNA polymerase II subunit: G
DNA-directed RNA polymerases I, II, and III subunit RPABC3: H
DNA-directed RNA polymerase subunit: I
RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III: J
RNA polymerase II subunit B12.5: K
RNA polymerase subunit ABC10-alpha: L
5'-3' exoribonuclease: P
Decapping nuclease: Q
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
P
R
Q
S

DNA-directed RNA polymerase subunit

DNA-directed RNA polymerase subunit beta

RNA polymerase II third largest subunit B44, part of central core

RNA polymerase II subunit B32

DNA-directed RNA polymerases I, II, and III subunit RPABC1

RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III

RNA polymerase II subunit

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase subunit

RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III

RNA polymerase II subunit B12.5

RNA polymerase subunit ABC10-alpha

5'-3' exoribonuclease

Decapping nuclease

Related Entries With Identical Sequence

5x4z.1 | 5x4z.2 | 5x50.1 | 5x51.1 | 5x51.2 | 5xog.1 | 5xon.1 | 6a5l.1 | 6a5o.1 | 6a5p.1 | 6a5r.1 | 6a5t.1 | 6a5u.1 | 6inq.1 | 6ir9.1 | 6j4w.1 | 6j4x.1 | 6j4y.1 | 6j4z.1 | 6j50.1 | 6j51.1 | 7wbv.1 | 7wbw.1 | 7wbx.1 | 7xn7.1 | 7xse.1 | 7xsx.1 | 7xsz.1 | 7xt7.1 | 7xtd.1  more...