SMTL ID : 8zbm.1

RAT skeletal muscle ATM complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-4-6-mer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.8, A:S.10, A:L.12, A:D.153, A:K.209, A:E.210, A:G.298, A:M.301, A:K.332 Salt bridges: A:K.14, A:K.14 pi-Stacking: A:Y.302 ADP.2: 15 residues within 4Å: Chain B: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:S.10, B:L.12, B:L.12, B:D.153, B:K.209, B:E.210, B:G.298, B:T.299, B:M.301, B:K.332 Salt bridges: B:K.14, B:K.14 pi-Stacking: B:Y.302 ADP.3: 16 residues within 4Å: Chain C: N.8, G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 12 PLIP interactions: 12 interactions with chain C Hydrogen bonds: C:N.8, C:S.10, C:L.12, C:D.153, C:K.209, C:E.210, C:G.298, C:M.301, C:K.332 Salt bridges: C:K.14, C:K.14 pi-Stacking: C:Y.302 ADP.4: 15 residues within 4Å: Chain D: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 12 PLIP interactions: 12 interactions with chain D Hydrogen bonds: D:N.8, D:S.10, D:L.12, D:D.153, D:K.209, D:E.210, D:G.298, D:M.301, D:K.332 Salt bridges: D:K.14, D:K.14 pi-Stacking: D:Y.302 ADP.5: 15 residues within 4Å: Chain F: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 13 PLIP interactions: 13 interactions with chain F Hydrogen bonds: F:S.10, F:L.12, F:L.12, F:D.153, F:K.209, F:E.210, F:E.210, F:G.298, F:T.299, F:K.332 Salt bridges: F:K.14, F:K.14 pi-Stacking: F:Y.302 ADP.6: 16 residues within 4Å: Chain G: N.8, G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 13 PLIP interactions: 13 interactions with chain G Hydrogen bonds: G:N.8, G:S.10, G:L.12, G:D.153, G:K.209, G:E.210, G:G.298, G:T.299, G:M.301, G:K.332 Salt bridges: G:K.14, G:K.14 pi-Stacking: G:Y.302

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D.N. et al., Cryo-EM structure Rat skeletal muscle ATM complex. To Be Published

Release Date

2025-01-29

Peptides

Actin, alpha skeletal muscle: ABCDFG
Tropomyosin beta chain: EIKL
Myosin heavy chain 4: HJMNOP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
H

C
O

D
Q

F
P

G
R

E
C

I
B

K
G

L
F

H
A

J
D

M
J

N
L

O
K

P
N

Actin, alpha skeletal muscle

Tropomyosin beta chain

Myosin heavy chain 4

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