- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-3-3-1-mer
- Ligands
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 5 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 2 residues within 4Å:- Chain B: T.177
- Ligands: ATP.1
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:T.177
MG.3: 2 residues within 4Å:- Chain C: T.177
- Ligands: ATP.4
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:T.177
MG.6: 2 residues within 4Å:- Chain D: K.154
- Ligands: ADP.5
No protein-ligand interaction detected (PLIP)MG.7: 4 residues within 4Å:- Chain G: T.155, E.180
- Ligands: ADP.8, PO4.9
2 PLIP interactions:2 interactions with chain G- Metal complexes: G:T.155, G:E.180
MG.10: 2 residues within 4Å:- Chain H: T.177
- Ligands: ATP.11
1 PLIP interactions:1 interactions with chain H- Metal complexes: H:T.177
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.5: 12 residues within 4Å:- Chain C: S.376, R.377
- Chain D: G.151, V.152, G.153, K.154, T.155, V.156, Y.336, A.412, F.415
- Ligands: MG.6
12 PLIP interactions:10 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:G.151, D:V.152, D:G.153, D:K.154, D:T.155, D:T.155, D:V.156
- Salt bridges: D:K.154, C:R.377, C:R.377
- pi-Stacking: D:Y.336, D:Y.336
ADP.8: 18 residues within 4Å:- Chain G: G.149, G.151, V.152, G.153, K.154, T.155, V.156, N.157, R.181, Y.336, F.409, A.412, F.415
- Chain H: V.375, S.376, R.377
- Ligands: MG.7, PO4.9
15 PLIP interactions:3 interactions with chain H, 12 interactions with chain G- Hydrogen bonds: H:S.376, G:G.151, G:V.152, G:G.153, G:K.154, G:T.155, G:T.155, G:T.155, G:V.156, G:N.157, G:R.181
- Salt bridges: H:R.377, H:R.377, G:K.154
- pi-Stacking: G:Y.336
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Le, K.C.M. et al., Cryo-EM reveals transition states of the Acinetobacter baumannii F 1 -ATPase rotary subunits gamma and epsilon , unveiling novel compound targets. Faseb J. (2024)
- Release Date
- 2024-11-13
- Peptides
- ATP synthase epsilon chain: A
ATP synthase subunit alpha: BCH
ATP synthase subunit beta: DEG
ATP synthase gamma chain: F - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
eB
BC
CH
AD
DE
FG
EF
g
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-3-3-1-mer
- Ligands
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 5 x MG: MAGNESIUM ION(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Le, K.C.M. et al., Cryo-EM reveals transition states of the Acinetobacter baumannii F 1 -ATPase rotary subunits gamma and epsilon , unveiling novel compound targets. Faseb J. (2024)
- Release Date
- 2024-11-13
- Peptides
- ATP synthase epsilon chain: A
ATP synthase subunit alpha: BCH
ATP synthase subunit beta: DEG
ATP synthase gamma chain: F - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
eB
BC
CH
AD
DE
FG
EF
g