SMTL ID : 8zix.1

RAT skeletal muscle F-actin

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.10, A:L.12, A:L.12, A:D.153, A:D.153, A:K.209, A:G.298, A:K.332 Salt bridges: A:K.14, A:K.14 pi-Stacking: A:Y.302 ADP.2: 15 residues within 4Å: Chain B: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:S.10, B:L.12, B:L.12, B:D.153, B:D.153, B:D.153, B:K.209, B:G.298, B:Y.302, B:K.332 Salt bridges: B:K.14, B:K.14 ADP.3: 15 residues within 4Å: Chain C: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:S.10, C:L.12, C:L.12, C:D.153, C:D.153, C:K.209, C:G.298, C:Y.302, C:K.332 Salt bridges: C:K.14, C:K.14 ADP.4: 16 residues within 4Å: Chain D: N.8, G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:D.7, D:N.8, D:L.12, D:Q.133, D:D.153, D:D.153, D:D.153, D:K.209, D:G.298, D:Y.302, D:K.332 Salt bridges: D:K.14, D:K.14 ADP.5: 15 residues within 4Å: Chain E: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 13 PLIP interactions: 13 interactions with chain E Hydrogen bonds: E:D.7, E:S.10, E:L.12, E:L.12, E:D.153, E:D.153, E:D.153, E:K.209, E:G.298, E:M.301, E:K.332 Salt bridges: E:K.14, E:K.14 ADP.6: 15 residues within 4Å: Chain F: G.9, S.10, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 12 PLIP interactions: 12 interactions with chain F Hydrogen bonds: F:D.7, F:N.8, F:S.10, F:L.12, F:D.153, F:D.153, F:D.153, F:K.209, F:G.298, F:K.332 Salt bridges: F:K.14, F:K.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D.N. et al., RAT skeletal muscle F-actin. To Be Published

Release Date

2025-01-29

Peptides

Actin, alpha skeletal muscle: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
R

C
A

D
E

E
B

F
F

Actin, alpha skeletal muscle

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