SMTL ID : 9cm2.1

Cryo-EM model derived from localized reconstruction of human adenovirus 6-hexon-FX complex at 4.3A resolution

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-1-mer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain D: E.47, E.69 No protein-ligand interaction detected (PLIP) CA.2: 6 residues within 4Å: Chain D: E.56, E.65, E.66, E.69, V.70 Ligands: CA.3 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:E.66 CA.3: 4 residues within 4Å: Chain D: E.56, E.66, E.69 Ligands: CA.2 No protein-ligand interaction detected (PLIP) CA.4: 2 residues within 4Å: Chain D: E.46, R.55 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:R.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mudrick, H.E. et al., Structure-derived insights from blood factors binding to the surfaces of different adenoviruses. Nat Commun (2024)

Release Date

2024-11-27

Peptides

Hexon protein: ABC
Coagulation factor X: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

B
K

C
L

D
Z

Hexon protein

Coagulation factor X

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