SMTL ID : 9cm9.1

Cryo-EM model derived from localized reconstruction of Ad657-hexon-FX complex at 3.86A resolution

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-1-mer

Ligands

7 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain C: T.431 Chain D: E.65, R.68, E.69 No protein-ligand interaction detected (PLIP) CA.2: 4 residues within 4Å: Chain C: T.429 Chain D: E.47, E.65, E.69 No protein-ligand interaction detected (PLIP) CA.3: 5 residues within 4Å: Chain D: E.47, K.50, G.51, E.69 Ligands: CA.4 No protein-ligand interaction detected (PLIP) CA.4: 6 residues within 4Å: Chain D: E.47, G.51, E.56, E.66, E.69 Ligands: CA.3 No protein-ligand interaction detected (PLIP) CA.5: 3 residues within 4Å: Chain D: E.46, R.55, E.56 No protein-ligand interaction detected (PLIP) CA.6: 2 residues within 4Å: Chain D: E.56, E.60 No protein-ligand interaction detected (PLIP) CA.7: 3 residues within 4Å: Chain D: E.54, M.58, E.59 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mudrick, H.E. et al., Structure-derived insights from blood factors binding to the surfaces of different adenoviruses. Nat Commun (2024)

Release Date

2024-11-27

Peptides

Hexon protein: ABC
Coagulation factor X: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

B
K

C
L

D
Z

Hexon protein

Coagulation factor X

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