SMTL ID : 9dho.1

Structure of proteinase K from energy-filtered MicroED data

Coordinates

PDB Format Compare

Method

ELECTRON CRYSTALLOGRAPHY 1.09 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: P.175, V.177, C.178, T.179, D.200 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:P.175, A:D.200, A:D.200, H2O.1, H2O.1 CA.2: 4 residues within 4Å: Chain A: R.12, T.16, S.17, D.260 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.16, H2O.2, H2O.4, H2O.7, H2O.9

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.3: 5 residues within 4Å: Chain A: Y.60, Y.61, K.94, D.97, D.98 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.94, A:D.98 Water bridges: A:Y.61, A:Y.61, A:R.64, A:D.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clabbers, M.T.B. et al., Energy filtering enables macromolecular MicroED data at sub-atomic resolution. Biorxiv (2024)

Release Date

2025-03-19

Peptides

Proteinase K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proteinase K

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