SMTL ID : 9e30.3 (2 other biounits)

Discovery of Potent, Highly Selective and Efficacious SMARCA2 Degraders - Compound 13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x 01: (12'S)-4'-chloro-10'-(piperidin-4-yl)-5'H-spiro[cyclohexane-1,7'-indolo[1,2-a]quinazolin]-5'-one

01.1: 14 residues within 4Å: Chain A: V.38, F.39, Q.41, L.42, P.43, L.48, Y.51, V.59, D.60, L.86, A.90, F.93, N.94, I.100 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.42, A:P.43, A:L.48, A:D.60, A:F.93, A:I.100 Hydrogen bonds: A:N.94 pi-Stacking: A:F.39 Halogen bonds: A:L.86

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 1 residues within 4Å: Chain A: H.88 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.88 ZN.3: 1 residues within 4Å: Chain A: E.102 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.102, A:E.102, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Z. et al., Discovery of Potent, Highly Selective, and Efficacious SMARCA2 Degraders. J.Med.Chem. (2024)

Release Date

2024-12-18

Peptides

Isoform Short of Probable global transcription activator SNF2L2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Isoform Short of Probable global transcription activator SNF2L2

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