SMTL ID : 9f34.1

Cryo-EM structure of Dopamine 3 receptor:Go complex bound to bitopic FOB02-04A - Conformation B

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x 01: N-[2-[(1R,2S)-2-[[(2S,5S)-2-(6-azanylpyridin-3-yl)-5-methyl-morpholin-4-yl]methyl]cyclopropyl]ethyl]-1H-indole-2-carboxamide

01.1: 13 residues within 4Å: Chain E: L.358, D.379, V.380, C.383, S.461, S.465, W.611, F.614, F.615, P.631, Y.634, T.638, Y.642 11 PLIP interactions: 11 interactions with chain E Hydrophobic interactions: E:V.380, E:F.614, E:P.631, E:Y.634, E:Y.634, E:Y.634, E:Y.642 Hydrogen bonds: E:S.465, E:S.465 Salt bridges: E:D.379 pi-Stacking: E:F.615

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arroyo-Urea, S. et al., A bitopic agonist bound to the dopamine 3 receptor reveals a selectivity site. Nat Commun (2024)

Release Date

2024-09-18

Peptides

Guanine nucleotide-binding protein G(o) subunit alpha: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Antibody scFv16: D
Green fluorescent protein,D(3) dopamine receptor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
E

E
R

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(o) subunit alpha

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Antibody scFv16

Green fluorescent protein,D(3) dopamine receptor

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