SMTL ID : 6u7c.1

Human GRK2 in complex with Gbetagamma subunits and CCG258747

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x Q1Y: 5-[(3S,4R)-3-{[(2H-1,3-benzodioxol-5-yl)oxy]methyl}piperidin-4-yl]-2-fluoro-N-[(2H-indazol-3-yl)methyl]benzamide(Non-covalent)

Q1Y.1: 27 residues within 4Å: Chain A: I.197, G.198, R.199, G.200, G.201, F.202, G.203, E.204, V.205, A.218, K.220, L.222, G.232, L.235, A.236, E.239, V.255, L.271, D.272, M.274, D.278, A.321, L.324, D.335, A.480, D.481, A.482 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:I.197, A:F.202, A:V.205, A:V.205, A:L.222, A:L.235, A:A.236, A:L.324 Hydrogen bonds: A:G.201, A:F.202, A:G.203, A:K.220, A:K.220, A:M.274, A:D.278, A:A.321, A:D.335

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 6 residues within 4Å: Chain A: H.348, E.360, V.361, Q.363, V.366, Y.368 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.348, A:E.360, A:V.361, A:Q.363, A:V.366

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bouley, R.A. et al., A New Paroxetine-Based GRK2 Inhibitor Reduces Internalization of themu-Opioid Receptor. Mol.Pharmacol. (2020)

Release Date

2020-04-15

Peptides

Beta-adrenergic receptor kinase 1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

Beta-adrenergic receptor kinase 1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

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