SMTL ID : 9f7w.1

Humman PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol A (BPA)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

hetero-1-1-mer

Ligands

2 x 2OH: 4,4'-PROPANE-2,2-DIYLDIPHENOL(Non-covalent)

2OH.1: 15 residues within 4Å: Chain A: I.55, L.61, E.65, I.68, K.69, I.73, Q.79, R.86, I.87, G.90, C.91, R.94, I.147, S.148, M.154 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.61, A:I.68, A:R.86, A:I.147, A:I.147 Hydrogen bonds: A:K.69, A:Q.79 2OH.2: 11 residues within 4Å: Chain A: I.73, T.74, Q.89, Q.92, F.93, V.96, S.270, L.271, H.272, P.273, Q.276 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.73, A:Q.89, A:F.93 pi-Stacking: A:H.272

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Useini, A. et al., Structural Studies on the Binding Mode of Bisphenols to PPAR gamma. Biomolecules (2024)

Release Date

2024-07-10

Peptides

Peroxisome proliferator-activated receptor gamma: A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

Peroxisome proliferator-activated receptor gamma coactivator 1-alpha

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