SMTL ID : 9fy5.1

CRYSTAL STRUCTURE OF HUMAN MONOACYLGLYCEROL LIPASE WITH COMPOUND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.43 Å

Oligo State

monomer

Ligands

1 x 01: (4aR,8aS)-6-[4-(diphenylmethyl)piperidin-1-yl]carbonyl-4,4a,5,7,8,8a-hexahydropyrido[4,3-b][1,4]oxazin-3-one

01.1: 21 residues within 4Å: Chain A: G.70, A.71, E.73, R.77, H.141, S.142, M.143, L.168, A.171, S.175, F.179, I.199, L.204, Y.214, L.225, G.230, L.233, L.234, L.261, H.289, V.290 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.168, A:A.171, A:F.179, A:F.179, A:I.199, A:L.204, A:L.225, A:L.233, A:L.261 Hydrogen bonds: A:A.71, A:R.77, A:H.141, A:M.143

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: R.53, H.74, G.76, D.217 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.53, A:D.217 Water bridges: A:R.53, A:R.53, A:G.76, A:D.217 EDO.3: 7 residues within 4Å: Chain A: Q.32, G.101, R.107, P.218, L.219, I.220, C.221 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.32, A:G.101, A:R.107 EDO.4: 3 residues within 4Å: Chain A: N.235, R.239, R.242 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.239, A:R.242, A:R.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gazzi, T. et al., Development of a Highly Selective NanoBRET Probe to Assess MAGL Inhibition in Live Cells. Chembiochem (2024)

Release Date

2024-12-11

Peptides

Monoglyceride lipase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Monoglyceride lipase

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