SMTL ID : 9geu.1 (1 other biounit)

Crystal structure of CREBBP bromodomain in complex with (R,E)-2-methyl-1,2,3,5,10,11,17,18,21,22-decahydro-4H,16H,20H-13,15-etheno-7,25-(metheno)[1,4]diazepino[2,3-h]pyrido[1,2-p][1]oxa[4,16]diazacyclononadecine-4,8(9H)-dione

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

monomer

Ligands

2 x BU3: (R,R)-2,3-BUTANEDIOL(Non-covalent)

BU3.1: 5 residues within 4Å: Chain A: P.9, E.10, L.64, D.65, G.67 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.10, A:E.10 Water bridges: A:R.13 BU3.3: 1 residues within 4Å: Chain A: R.62 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.62 Water bridges: A:R.62, A:Q.68, A:Q.68, A:Q.68

1 x 01: (R,E)-2-methyl-1,2,3,5,10,11,17,18,21,22-decahydro-4H,16H,20H-13,15-etheno-7,25-(metheno)[1,4]diazepino[2,3-h]pyrido[1,2-p][1]oxa[4,16]diazacyclononadecine-4,8(9H)-dione

01.2: 8 residues within 4Å: Chain A: P.32, F.33, V.37, L.42, Y.47, Y.89, N.90, V.96 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.33, A:V.37, A:L.42 Hydrogen bonds: A:P.32, A:N.90, A:N.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Amann, M. et al., Crystal structure of the human CREBBP bromodomain in complex with (R,E)-2-methyl-1,2,3,5,10,11,17,18,21,22-decahydro-4H,16H,20H-13,15-etheno-7,25-(metheno)[1,4]diazepino[2,3-h]pyrido[1,2-p][1]oxa[4,16]diazacyclononadecine-4,8(9H)-dione. To Be Published

Release Date

2025-08-20

Peptides

CREBBP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CREBBP

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