SMTL ID : 9iwz.1

Crystal structure of the mouse RIP3 kinase domain in complexed with GSK'843

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

homo-dimer

Ligands

2 x ZOV: 3-(1,3-benzothiazol-5-yl)-7-(1,3-dimethyl-1H-pyrazol-5-yl)thieno[3,2-c]pyridin-4-amine(Non-covalent)

ZOV.1: 15 residues within 4Å: Chain A: V.28, V.36, A.49, K.51, E.61, M.65, L.74, L.93, T.95, R.96, F.97, M.98, G.101, L.150, D.161 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.36, A:A.49, A:K.51, A:L.74, A:T.95, A:L.150 Hydrogen bonds: A:T.95, A:R.96, A:M.98, A:D.161 pi-Cation interactions: A:K.51 ZOV.2: 16 residues within 4Å: Chain B: V.28, V.36, A.49, K.51, E.61, M.65, L.74, L.93, T.95, R.96, F.97, M.98, G.101, L.150, A.160, D.161 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:A.49, B:K.51, B:L.74, B:T.95, B:L.150, B:A.160 Hydrogen bonds: B:K.51, B:R.96, B:M.98, B:D.161 pi-Cation interactions: B:K.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, H. et al., Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro. Nat Commun (2025)

Release Date

2025-05-07

Peptides

Receptor-interacting serine/threonine-protein kinase 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-interacting serine/threonine-protein kinase 3

Related Entries With Identical Sequence