SMTL ID : 9mj4.1

Yeast V-ATPase Vo proton channel bound to nanobody 2WVA149

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.70 Å

Oligo State

hetero-1-1-1-1-8-1-1-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Knight, K. et al., Monoclonal nanobodies alter the activity and assembly of the yeast vacuolar H + -ATPase. Biorxiv (2025)

Release Date

2025-02-05

Peptides

V-type proton ATPase subunit c': A
V-type proton ATPase subunit c'': B
V0 assembly protein 1: C
V-type proton ATPase subunit e: D
V-type proton ATPase subunit c: EGHIJKLM
Yeast V-ATPase subunit f: F
V-type proton ATPase subunit d: N
V-type proton ATPase subunit a, vacuolar isoform: O
Nanobody 2WVA149: P

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

C
N

D
M

E
E

G
F

H
G

I
H

J
I

K
J

L
K

M
L

F
O

N
B

O
A

P
Q

Membrane

We predict this structure to be a membrane protein.
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V-type proton ATPase subunit c'

V-type proton ATPase subunit c''

V0 assembly protein 1

V-type proton ATPase subunit e

V-type proton ATPase subunit c

Yeast V-ATPase subunit f

V-type proton ATPase subunit d

V-type proton ATPase subunit a, vacuolar isoform

Nanobody 2WVA149

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