SMTL ID : 9o9i.1

Crystal structure of mouse Vps29 bound to DENND4C peptide (re-refinement)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CAC: CACODYLATE ION(Non-covalent)

CAC.1: 4 residues within 4Å: Chain A: R.66, D.68, E.77, H.94 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.66, A:E.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anton-Plagaro, C. et al., Mapping of endosomal proximity proteomes reveals Retromer as a hub for RAB GTPase regulation. Nat Commun (2025)

Release Date

2025-08-13

Peptides

Isoform 2 of Vacuolar protein sorting-associated protein 29: A
ALA-LYS-VAL-VAL-GLN-ARG-GLU-ASP-VAL-GLU-THR-GLY-LEU-ASP-PRO-LEU-SER-LEU: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Isoform 2 of Vacuolar protein sorting-associated protein 29

ALA-LYS-VAL-VAL-GLN-ARG-GLU-ASP-VAL-GLU-THR-GLY-LEU-ASP-PRO-LEU-SER-LEU

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