SMTL ID : 9p4w.1

Atomic model of wild type S. cerevisiae Fatty Acid Synthase (FAS)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-6-mer

Ligands

6 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 22 residues within 4Å: Chain A: P.595, G.596, M.597, T.598, P.599, C.600, N.650, I.652, G.682, K.706, T.733, G.737, G.738, G.739, S.769, G.770, L.800, G.802, S.803, M.806, L.1054, A.1059 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:M.597, A:L.1054, A:L.1054 Hydrogen bonds: A:G.596, A:T.598, A:T.598, A:N.650, A:N.650, A:K.706, A:K.706, A:G.738, A:S.769, A:G.770, A:G.802, A:S.803 Water bridges: A:A.683, A:R.736, A:F.771, A:F.771, A:R.804 FMN.4: 22 residues within 4Å: Chain D: P.595, G.596, M.597, T.598, P.599, C.600, N.650, I.652, G.682, K.706, T.733, G.737, G.738, G.739, S.769, G.770, L.800, G.802, S.803, M.806, L.1054, A.1059 19 PLIP interactions: 19 interactions with chain D Hydrophobic interactions: D:M.597, D:L.1054, D:L.1054 Hydrogen bonds: D:G.596, D:T.598, D:N.650, D:N.650, D:K.706, D:K.706, D:G.738, D:S.769, D:G.770, D:G.802, D:S.803 Water bridges: D:A.683, D:R.736, D:F.771, D:F.771, D:R.804 FMN.6: 22 residues within 4Å: Chain F: P.595, G.596, M.597, T.598, P.599, C.600, N.650, I.652, G.682, K.706, T.733, G.737, G.738, G.739, S.769, G.770, L.800, G.802, S.803, M.806, L.1054, A.1059 19 PLIP interactions: 19 interactions with chain F Hydrophobic interactions: F:M.597, F:L.1054, F:L.1054 Hydrogen bonds: F:G.596, F:T.598, F:T.598, F:N.650, F:N.650, F:K.706, F:K.706, F:G.738, F:S.769, F:G.770, F:G.802, F:S.803 Water bridges: F:G.738, F:F.771, F:F.771, F:A.1059 FMN.8: 22 residues within 4Å: Chain H: P.595, G.596, M.597, T.598, P.599, C.600, N.650, I.652, G.682, K.706, T.733, G.737, G.738, G.739, S.769, G.770, L.800, G.802, S.803, M.806, L.1054, A.1059 18 PLIP interactions: 18 interactions with chain H Hydrophobic interactions: H:M.597, H:L.1054, H:L.1054 Hydrogen bonds: H:G.596, H:T.598, H:N.650, H:N.650, H:K.706, H:K.706, H:G.738, H:S.769, H:G.770, H:G.802, H:S.803 Water bridges: H:R.736, H:G.738, H:F.771, H:F.771 FMN.10: 22 residues within 4Å: Chain J: P.595, G.596, M.597, T.598, P.599, C.600, N.650, I.652, G.682, K.706, T.733, G.737, G.738, G.739, S.769, G.770, L.800, G.802, S.803, M.806, L.1054, A.1059 19 PLIP interactions: 19 interactions with chain J Hydrophobic interactions: J:M.597, J:L.1054, J:L.1054 Hydrogen bonds: J:G.596, J:T.598, J:T.598, J:N.650, J:N.650, J:K.706, J:K.706, J:G.738, J:S.769, J:G.770, J:G.802, J:S.803 Water bridges: J:R.736, J:G.738, J:F.771, J:F.771 FMN.12: 22 residues within 4Å: Chain L: P.595, G.596, M.597, T.598, P.599, C.600, N.650, I.652, G.682, K.706, T.733, G.737, G.738, G.739, S.769, G.770, L.800, G.802, S.803, M.806, L.1054, A.1059 18 PLIP interactions: 18 interactions with chain L Hydrophobic interactions: L:M.597, L:L.1054, L:L.1054 Hydrogen bonds: L:G.596, L:T.598, L:N.650, L:N.650, L:K.706, L:K.706, L:G.738, L:S.769, L:G.770, L:G.802, L:S.803 Water bridges: L:R.736, L:G.738, L:F.771, L:F.771

6 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.2: 26 residues within 4Å: Chain B: G.682, G.684, S.687, I.688, T.707, S.708, R.709, F.737, N.738, Q.739, G.740, F.771, A.772, A.773, I.774, I.794, P.825, M.826, Y.839, K.843, I.869, G.870, T.872, G.876, L.877, M.878 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:I.869, B:I.869, B:L.877 Hydrogen bonds: B:I.688, B:T.707, B:S.708, B:S.708, B:S.708, B:N.738, B:Q.739, B:G.740, B:F.771, B:A.773, B:K.843, B:G.870, B:T.872, B:T.872 Water bridges: B:G.689, B:T.875, B:Q.898 Salt bridges: B:R.709 NDP.3: 26 residues within 4Å: Chain C: G.682, G.684, S.687, I.688, T.707, S.708, R.709, F.737, N.738, Q.739, G.740, F.771, A.772, A.773, I.774, I.794, P.825, M.826, Y.839, K.843, I.869, G.870, T.872, G.876, L.877, M.878 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:I.869, C:I.869, C:L.877 Hydrogen bonds: C:I.688, C:S.708, C:S.708, C:S.708, C:N.738, C:Q.739, C:G.740, C:F.771, C:A.773, C:Y.839, C:K.843, C:G.870, C:T.872 Water bridges: C:T.875, C:Q.898 Salt bridges: C:R.709 NDP.5: 26 residues within 4Å: Chain E: G.682, G.684, S.687, I.688, T.707, S.708, R.709, F.737, N.738, Q.739, G.740, F.771, A.772, A.773, I.774, I.794, P.825, M.826, Y.839, K.843, I.869, G.870, T.872, G.876, L.877, M.878 21 PLIP interactions: 21 interactions with chain E Hydrophobic interactions: E:I.869, E:I.869, E:L.877 Hydrogen bonds: E:I.688, E:T.707, E:S.708, E:S.708, E:S.708, E:N.738, E:Q.739, E:G.740, E:F.771, E:A.773, E:K.843, E:G.870, E:T.872, E:T.872 Water bridges: E:G.684, E:G.686, E:G.689 Salt bridges: E:R.709 NDP.7: 26 residues within 4Å: Chain G: G.682, G.684, S.687, I.688, T.707, S.708, R.709, F.737, N.738, Q.739, G.740, F.771, A.772, A.773, I.774, I.794, P.825, M.826, Y.839, K.843, I.869, G.870, T.872, G.876, L.877, M.878 19 PLIP interactions: 19 interactions with chain G Hydrophobic interactions: G:I.869, G:I.869, G:L.877 Hydrogen bonds: G:I.688, G:S.708, G:S.708, G:S.708, G:N.738, G:Q.739, G:G.740, G:F.771, G:A.773, G:Y.839, G:K.843, G:G.870, G:T.872 Water bridges: G:T.875, G:Q.898 Salt bridges: G:R.709 NDP.9: 26 residues within 4Å: Chain I: G.682, G.684, S.687, I.688, T.707, S.708, R.709, F.737, N.738, Q.739, G.740, F.771, A.772, A.773, I.774, I.794, P.825, M.826, Y.839, K.843, I.869, G.870, T.872, G.876, L.877, M.878 20 PLIP interactions: 20 interactions with chain I Hydrophobic interactions: I:I.869, I:I.869, I:L.877 Hydrogen bonds: I:I.688, I:T.707, I:S.708, I:S.708, I:S.708, I:N.738, I:Q.739, I:G.740, I:F.771, I:A.773, I:K.843, I:G.870, I:T.872, I:T.872 Water bridges: I:T.875, I:Q.898 Salt bridges: I:R.709 NDP.11: 26 residues within 4Å: Chain K: G.682, G.684, S.687, I.688, T.707, S.708, R.709, F.737, N.738, Q.739, G.740, F.771, A.772, A.773, I.774, I.794, P.825, M.826, Y.839, K.843, I.869, G.870, T.872, G.876, L.877, M.878 22 PLIP interactions: 22 interactions with chain K Hydrophobic interactions: K:I.869, K:I.869, K:L.877 Hydrogen bonds: K:I.688, K:S.708, K:S.708, K:S.708, K:N.738, K:Q.739, K:G.740, K:F.771, K:A.773, K:Y.839, K:K.843, K:G.870, K:T.872 Water bridges: K:G.684, K:G.686, K:G.689, K:T.875, K:Q.898 Salt bridges: K:R.709

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hasan, N.S.M. et al., Allosteric Regulation of Ketoacyl Reduction in Fungal Fatty Acid Synthases. To Be Published

Release Date

2025-08-27

Peptides

Fatty acid synthase subunit beta: ADFHJL
Fatty acid synthase subunit alpha: BCEGIK

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
E

F
I

H
L

J
O

L
R

B
B

C
D

E
H

G
K

I
N

K
Q

Fatty acid synthase subunit beta

Fatty acid synthase subunit alpha

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