SMTL ID : 9rm4.1

Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015373

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

1 x 01: ~{N}-[3-chloranyl-5-[(2-methyl-1-oxidanyl-propan-2-yl)carbamoyl]phenyl]-5-[(dimethylamino)methyl]-1~{H}-pyrrole-2-carboxamide

01.1: 19 residues within 4Å: Chain A: S.38, G.39, D.40 Chain B: H.88, D.112, D.166, Y.167, P.168, A.169, T.171, S.172, Y.187, G.188, N.189, G.190, V.192, G.196, S.197, Y.198 11 PLIP interactions: 10 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:D.166, B:Y.198 Hydrogen bonds: B:Y.167, B:N.189, B:G.190, B:Y.198 Water bridges: B:A.169 Salt bridges: B:D.112, A:D.40 pi-Stacking: B:H.88, B:Y.198

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain B: K.91, A.93 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0015373. To Be Published

Release Date

2025-07-23

Peptides

Serine protease subunit NS2B,Serine protease NS3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

Serine protease subunit NS2B,Serine protease NS3

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