SMTL ID : 9rm7.1

Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0036543

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 4 residues within 4Å: Chain B: T.90, K.91, G.92, A.93 No protein-ligand interaction detected (PLIP)

1 x 01: (2~{S})-~{N}-[2,2-bis(fluoranyl)ethyl]-2-(2,3-dihydro-1~{H}-isoindol-5-ylamino)-2-[3-methyl-5-(trifluoromethyl)phenyl]ethanamide

01.2: 18 residues within 4Å: Chain A: S.38, G.39, D.40 Chain B: H.88, K.91, D.112, Y.167, P.168, A.169, T.171, S.172, Y.187, G.188, N.189, G.190, V.191, V.192, Y.198 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.88, B:Y.187, B:Y.198 Hydrogen bonds: B:G.190, B:Y.198, A:S.38 pi-Stacking: B:H.88, B:Y.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0036543. To Be Published

Release Date

2025-07-23

Peptides

Serine protease subunit NS2B,Serine protease NS3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B,Serine protease NS3

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