SMTL ID : 9rm6.1

Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0027808

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

1 x 01: 6-chloranyl-~{N}-(2,3-dihydro-1~{H}-isoindol-5-yl)-1~{H}-indazole-4-carboxamide

01.1: 16 residues within 4Å: Chain A: S.38, G.39, D.40 Chain B: H.88, D.112, Y.167, P.168, A.169, T.171, S.172, Y.187, G.188, N.189, G.190, V.192, Y.198 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.88 Hydrogen bonds: B:G.188, A:D.40 Water bridges: B:Y.167 pi-Stacking: B:H.88, B:Y.198, B:Y.198

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 6 residues within 4Å: Chain A: D.32, V.33, V.44 Chain B: K.154, T.155, K.156 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:D.32

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain B: K.91, G.92, A.93 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0027808. To Be Published

Release Date

2025-07-23

Peptides

Serine protease subunit NS2B,Serine protease NS3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease subunit NS2B,Serine protease NS3

Related Entries With Identical Sequence