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RNA-directed RNA polymerase nsp12 (Pol) | P0DTD1 PRO_0000449629

Created: Dec. 14, 2022 at 09:37

Template Results

CoverageGMQEQSQEIdentityMethodOligo StateLigands
7re1.1.A RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC (composite)
0.88-100.00EMhetero-hexamer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3
7rdz.1.A RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - apo class
0.88-100.00EMhetero-hexamer 8 x ZN, 1 x MG, 1 x ADP
7rdx.1.A RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class
0.88-100.00EMhetero-hexamer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3
7krp.1.A RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - BTC (local refinement)
0.88-100.00EMhetero-tetramer 2 x ZN, 1 x MG, 1 x ADP, 3 x 1N7
7re3.1.J RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer
0.870.71100.00EMhetero-12-mer 16 x ZN, 6 x MG, 6 x ADP, 4 x AF3, 2 x 1N7
7krn.1.A RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC
0.87-100.00EMhetero-pentamer 5 x ZN, 2 x MG, 2 x ADP, 3 x 1N7, 1 x AF3
7kro.1.A RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - nsp13(2)-BTC
0.87-100.00EMhetero-hexamer 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3
7aap.1.A Non-structural protein 12
Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP
0.87-100.00EMhetero-tetramer 2 x ZN, 2 x MG, 1 x POP, 1 x GE6
6m71.1.A RNA-directed RNA polymerase
SARS-Cov-2 RNA-dependent RNA polymerase in complex with cofactors
0.84-100.00EMhetero-tetramer None
7bv2.1.A RNA-directed RNA polymerase
The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)
0.83-100.00EMhetero-trimer 2 x ZN, 1 x POP, 2 x MG, 1 x F86
6nur.1.A NSP12
SARS-Coronavirus NSP12 bound to NSP7 and NSP8 co-factors
0.77-96.35EMhetero-tetramer 2 x ZN

The full list of templates matching your target sequence includes the following templates which are not in the list above. The full template list is available in text or html format.
1csj.1.A, 1gx6.1.A, 1khv.1.A, 1khv.2.A, 1nb7.1.A, 1nb7.2.A, 1nhu.1.A, 1raj.1.A, 1rdr.1.A, 1s48.1.A, 1s4f.1.A, 1s4f.2.A, 1s4f.3.A, 1s4f.4.A, 1sh0.1.A, 1sh2.1.A, 1sh3.1.A, 1sh3.2.A, 1tp7.1.A, 1tp7.3.A, 1tql.1.A, 1wne.1.A, 1xr5.1.A, 1xr6.1.A, 1xr7.1.A, 1yuy.1.A, 1yvf.1.A, 1yvx.1.A, 2awz.1.A, 2b43.1.A, 2cjq.1.A, 2ckw.1.A, 2d3z.1.A, 2dxs.1.A, 2f8e.1.A, 2fvc.1.A, 2gc8.1.A, 2giq.1.A, 2hai.1.A, 2ijd.1.A, 2ijd.2.A, 2ijf.1.A, 2ily.1.A, 2j7w.1.A, 2jc0.1.A, 2o5d.1.A, 2qe2.1.A, 2qe5.1.A, 2uut.1.A, 2uuw.1.A, 2wcx.1.A, 2who.1.A, 2wk4.1.A, 2wk4.1.B, 2wrm.1.A, 2xhu.1.A, 2xhv.1.A, 2xhw.1.A, 2xi2.1.A, 2xwh.1.A, 2xxd.1.A, 2xym.1.A, 2zku.1.A, 3cdu.1.A, 3cwj.1.A, 3ddk.1.A, 3fql.1.A, 3frz.1.A, 3gnv.1.A, 3gol.2.A, 3gsz.1.A, 3h5s.1.A, 3h5x.1.A, 3hhk.1.A, 3hkw.1.A, 3i5k.1.A, 3klv.1.A, 3kmq.1.A, 3kms.1.A, 3kna.1.A, 3koa.1.A, 3lkh.2.A, 3mf5.1.A, 3n6l.1.A, 3n6m.1.A, 3nai.1.A, 3nai.2.A, 3nai.2.B, 3nky.1.A, 3nl0.1.A, 3nma.1.A, 3ol8.4.A, 3qgd.1.A, 3qge.2.A, 3qgg.1.A, 3qgi.1.A, 3qid.1.A, 3qid.2.A, 3qid.2.B, 3sfg.1.A, 3sfg.2.A, 3sfg.2.B, 3sfu.1.A, 3sfu.2.A, 3sfu.2.B, 3ske.1.A, 3u4r.1.A, 3upf.1.A, 3upf.2.A, 3upi.1.A, 3uqs.1.A, 3ur0.4.E, 3vqs.1.A, 3vqs.2.A, 3vws.1.A, 4adp.1.A, 4aep.1.A, 4c11.1.A, 4c11.1.B, 4dru.1.A, 4e76.1.A, 4eaw.1.A, 4eo6.1.A, 4gmc.1.A, 4gmc.2.A, 4hdg.1.A, 4hhj.1.A, 4ika.1.A, 4iqx.1.A, 4j0a.2.A, 4k4s.1.A, 4k4u.1.A, 4k4w.1.A, 4k4x.1.A, 4k50.2.A, 4k6m.1.A, 4kai.1.A, 4kb7.1.A, 4khm.1.A, 4khr.1.A, 4lq3.1.A, 4lq9.1.A, 4mtp.1.A, 4mz4.2.A, 4nld.1.A, 4nlo.1.A, 4nlp.1.A, 4nlq.1.A, 4nlr.1.A, 4nls.1.A, 4nlt.1.A, 4nlu.1.A, 4nlv.1.A, 4nlw.1.A, 4nlx.1.A, 4nly.1.A, 4nru.1.A, 4nyz.1.A, 4nz0.1.A, 4nz0.2.A, 4nz0.3.A, 4nz0.5.A, 4nz0.6.A, 4o4r.1.A, 4oow.1.A, 4oow.2.A, 4qpx.1.A, 4r0e.1.A, 4ry4.1.A, 4ry4.2.A, 4ry5.1.A, 4ry5.2.A, 4ry6.1.A, 4ry7.1.A, 4ry7.2.A, 4tlr.1.A, 4tn2.1.A, 4txs.1.A, 4ty8.2.A, 4ty9.1.A, 4v0r.1.A, 4wfx.1.A, 4wfy.1.A, 4wt9.1.A, 4wtc.1.A, 4wtk.1.A, 4wyl.1.A, 4wyw.1.A, 4wzm.1.A, 4wzq.1.A, 4x2b.1.A, 4y2a.1.A, 4y2c.1.A, 4y34.1.A, 4y3c.1.A, 4y3c.2.A, 4y3c.3.A, 4y3c.5.A, 4y3c.6.A, 4zp6.1.A, 4zp7.1.A, 4zp8.1.A, 4zp9.1.A, 4zpa.1.A, 4zpb.1.A, 4zpc.1.A, 4zpd.1.A, 5ccv.1.A, 5ccv.2.A, 5ccv.3.A, 5ccv.5.A, 5ccv.8.A, 5czb.1.A, 5dto.1.A, 5f8g.1.A, 5i61.1.A, 5i61.2.A, 5i62.1.A, 5iq6.1.A, 5jjs.1.A, 5jxs.1.A, 5k5m.1.A, 5n8x.1.A, 5n95.1.A, 5pzo.1.A, 5pzo.2.A, 5pzp.2.A, 5qj0.1.A, 5qj1.1.A, 5tfr.1.A, 5tmh.1.A, 5twm.1.A, 5u0b.1.A, 5u0c.1.A, 5u0c.3.A, 5u0c.4.A, 5uj2.1.A, 5w2e.1.A, 5xe0.1.A, 5y6r.1.A, 5y6z.1.A, 5yf5.1.A, 5yf6.1.A, 5yf7.1.A, 5yf8.1.A, 5ziu.1.A, 5zqk.1.A, 6ae4.1.A, 6ae5.1.A, 6ae7.1.A, 6gp9.1.A, 6gvv.1.A, 6gvy.1.A, 6iii.1.A, 6izx.1.A, 6izy.1.A, 6izz.1.A, 6j00.1.A, 6kr2.1.A, 6kr3.1.A, 6kwq.1.A, 6ld1.1.A, 6ld2.1.A, 6lse.1.A, 6lsg.1.A, 6m71.1.A, 6mvk.1.A, 6mvo.1.A, 6mvp.1.A, 6mvq.1.A, 6nur.1.A, 6qwt.1.A, 6r1i.1.A, 6r1i.2.A, 6s2l.1.A, 6ux2.1.B, 6wcz.1.B, 6xez.1.A, 6xqb.1.A, 6yyt.1.A, 7aap.1.A, 7b3b.1.A, 7b3c.1.A, 7b3d.1.A, 7btf.1.A, 7bv1.1.A, 7bv2.1.A, 7bw4.1.A, 7bzf.1.A, 7c2k.1.A, 7ctt.1.A, 7cxm.1.A, 7cxn.1.A, 7cyq.1.A, 7d4f.1.D, 7d6n.1.A, 7dfg.1.C, 7dfh.1.A, 7diy.1.B, 7doi.1.A, 7dok.1.C, 7dte.1.A, 7ed5.1.A, 7egq.1.A, 7egq.1.I, 7eiz.1.A, 7ekj.1.A, 7f0s.1.A, 7krn.1.A, 7kro.1.A, 7krp.1.A, 7l1f.1.A, 7mc5.1.A, 7mc6.1.A, 7oyg.1.A, 7oyg.1.F, 7ozu.1.A, 7ozv.1.A, 7rdx.1.A, 7rdy.1.A, 7rdz.1.A, 7re0.1.A, 7re1.1.A, 7re2.1.A, 7re3.1.A, 7re3.1.J, 7thm.1.A, 7uo4.1.A, 7uo7.1.A, 7uo9.1.A, 7uob.1.A, 7uoe.1.A, 8gwb.1.A, 8gwg.1.A, 8gwi.1.A, 8gwn.1.A, 8gwo.1.A
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