| 7aap.1.A | Non-structural protein 12
Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP | 0.87 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 2 x ZN, 2 x MG, 1 x POP, 1 x GE6 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7aap.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7aap.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7aap.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7aap.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7aap.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7aap.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7aap.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7aap.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7aap.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7aap.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7aap.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7aap.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7krn.1.A | RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex bound to nsp13 helicase - nsp13(1)-BTC | 0.87 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 5 x ZN, 2 x MG, 2 x ADP, 3 x 1N7, 1 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7krn.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7krn.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7krn.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7krn.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7krn.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7krn.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7krn.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7krn.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7krn.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7krn.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7krn.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7krn.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7kro.1.A | RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - nsp13(2)-BTC | 0.87 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7kro.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7kro.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7kro.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7kro.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7kro.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7kro.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7kro.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7kro.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7kro.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7kro.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7kro.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7kro.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7krp.1.A | RNA-directed RNA polymerase
Structure of SARS-CoV-2 backtracked complex complex bound to nsp13 helicase - BTC (local refinement) | 0.88 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 2 x ZN, 1 x MG, 1 x ADP, 3 x 1N7 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7krp.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7krp.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7krp.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7krp.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7krp.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7krp.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7krp.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7krp.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7krp.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7krp.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7krp.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7krp.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7re3.1.J | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | 0.87 | 0.71 | 100.00 | 1.00 | 1-932 | EM | 0.00 | homo-dimer | 16 x ZN, 6 x MG, 6 x ADP, 4 x AF3, 2 x 1N7 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7re3.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7re3.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7re3.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7re3.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7re3.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7re3.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7re3.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7re3.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7re3.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7re3.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7re3.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7re3.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
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| 7re1.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC (composite) | 0.88 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7re1.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7re1.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7re1.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7re1.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7re1.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7re1.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7re1.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7re1.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7re1.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7re1.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7re1.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7re1.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7rdx.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - open class | 0.88 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7rdx.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7rdx.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7rdx.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7rdx.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7rdx.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7rdx.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7rdx.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7rdx.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7rdx.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7rdx.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7rdx.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7rdx.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7rdz.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - apo class | 0.88 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 8 x ZN, 1 x MG, 1 x ADP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7rdz.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7rdz.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7rdz.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7rdz.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7rdz.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7rdz.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7rdz.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7rdz.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7rdz.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7rdz.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7rdz.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7rdz.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7re3.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-2-4-2-4-mer | 16 x ZN, 6 x MG, 6 x ADP, 4 x AF3, 2 x 1N7 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7re3.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7re3.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7re3.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7re3.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7re3.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7re3.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7re3.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7re3.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7re3.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7re3.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7re3.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7re3.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7rdy.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - engaged class | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-mer | 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7rdy.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7rdy.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7rdy.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7rdy.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7rdy.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7rdy.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7rdy.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7rdy.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7rdy.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7rdy.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7rdy.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7rdy.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7re0.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC - swiveled class | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-mer | 8 x ZN, 3 x MG, 3 x ADP, 2 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7re0.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7re0.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7re0.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7re0.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7re0.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7re0.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7re0.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7re0.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7re0.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7re0.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7re0.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7re0.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7re2.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(1)-RTC | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-1-mer | 5 x ZN, 2 x MG, 2 x ADP, 3 x 1N7, 1 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7re2.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7re2.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7re2.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7re2.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7re2.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7re2.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7re2.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7re2.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7re2.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7re2.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7re2.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7re2.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 6xez.1.A | RNA-directed RNA polymerase
Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC | 0.85 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-mer | 8 x ZN, 3 x MG, 3 x ADP, 3 x 1N7, 2 x AF3 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6xez.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6xez.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6xez.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6xez.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6xez.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6xez.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6xez.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6xez.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6xez.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 6xez.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 6xez.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6xez.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7egq.1.I | RNA-directed RNA polymerase
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-2-4-2-4-2-2-… | 26 x ZN, 3 x MG | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7egq.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7egq.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7egq.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7egq.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7egq.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7egq.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7egq.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7egq.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7egq.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7egq.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7egq.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7egq.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7egq.1.A | RNA-directed RNA polymerase
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-2-4-2-4-2-2-… | 26 x ZN, 3 x MG | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7egq.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7egq.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7egq.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7egq.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7egq.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7egq.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7egq.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7egq.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7egq.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7egq.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7egq.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7egq.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7ctt.1.A | RNA-directed RNA polymerase
Cryo-EM structure of Favipiravir bound to replicating polymerase complex of SARS-CoV-2 in the pre-catalytic state. | 0.80 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 1 x MG, 1 x GE6 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ctt.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ctt.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ctt.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ctt.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ctt.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ctt.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ctt.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ctt.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ctt.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7ctt.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7ctt.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ctt.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7ozv.1.A | Replicase polyprotein 1ab
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ozv.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ozv.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ozv.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ozv.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ozv.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ozv.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ozv.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ozv.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ozv.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7ozv.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7ozv.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ozv.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7ozu.1.A | Replicase polyprotein 1ab
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ozu.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ozu.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ozu.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ozu.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ozu.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ozu.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ozu.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ozu.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ozu.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7ozu.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7ozu.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ozu.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7thm.1.A | RNA-directed RNA polymerase
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9 | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-1-mer | 2 x ZN, 1 x MN, 1 x POP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7thm.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7thm.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7thm.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7thm.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7thm.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7thm.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7thm.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7thm.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7thm.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7thm.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7thm.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7thm.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwo.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.85 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwo.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwo.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwo.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwo.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwo.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwo.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwo.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwo.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwo.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwo.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwo.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwo.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwb.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 2 x MN, 1 x A-U | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwb.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwb.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwb.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwb.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwb.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwb.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwb.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwb.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwb.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwb.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwb.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwb.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwn.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.85 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwn.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwn.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwn.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwn.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwn.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwn.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwn.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwn.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwn.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwn.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwn.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwn.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwi.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwi.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwi.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwi.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwi.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwi.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwi.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwi.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwi.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwi.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwi.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwi.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwi.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwg.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwg.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwg.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwg.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwg.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwg.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwg.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwg.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwg.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwg.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwg.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwg.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwg.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwf.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GTP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwf.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwf.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwf.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwf.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwf.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwf.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwf.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwf.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwf.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwf.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwf.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwf.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 8gwe.1.A | RNA-directed RNA polymerase
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GNP, 1 x MG, 1 x A-U-U-A | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8gwe.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8gwe.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8gwe.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8gwe.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8gwe.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8gwe.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8gwe.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 8gwe.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 8gwe.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 8gwe.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 8gwe.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8gwe.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7uo4.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to Remdesivir triphosphate, in a pre-catalytic state | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 1 x NWX, 1 x MG, 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7uo4.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7uo4.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7uo4.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7uo4.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7uo4.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7uo4.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7uo4.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7uo4.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7uo4.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7uo4.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7uo4.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7uo4.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7uo9.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to UTP, in a pre-catalytic state | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 1 x MG, 1 x UTP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7uo9.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7uo9.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7uo9.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7uo9.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7uo9.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7uo9.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7uo9.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7uo9.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7uo9.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7uo9.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7uo9.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7uo9.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7uoe.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to CTP, in a pre-catalytic state | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 2 x MG, 1 x CTP, 1 x L2B | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7uoe.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7uoe.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7uoe.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7uoe.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7uoe.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7uoe.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7uoe.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7uoe.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7uoe.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7uoe.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7uoe.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7uoe.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7uo7.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to ATP, in a pre-catalytic state | 0.86 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 1 x ATP, 1 x MG, 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7uo7.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7uo7.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7uo7.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7uo7.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7uo7.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7uo7.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7uo7.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7uo7.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7uo7.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7uo7.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7uo7.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7uo7.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7uob.1.A | RNA-directed RNA polymerase
SARS-CoV-2 replication-transcription complex bound to GTP, in a pre-catalytic state | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 3 x MG, 2 x GTP, 1 x L2B | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7uob.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7uob.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7uob.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7uob.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7uob.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7uob.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7uob.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7uob.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7uob.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7uob.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7uob.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7uob.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7bv1.1.A | RNA-directed RNA polymerase
Cryo-EM structure of the apo nsp12-nsp7-nsp8 complex | 0.82 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7bv1.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7bv1.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7bv1.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7bv1.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7bv1.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7bv1.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7bv1.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7bv1.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7bv1.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7bv1.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7bv1.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7bv1.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
✓
| 7bv2.1.A | RNA-directed RNA polymerase
The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP) | 0.83 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | 2 x ZN, 1 x POP, 2 x MG, 1 x F86 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7bv2.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7bv2.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7bv2.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7bv2.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7bv2.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7bv2.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7bv2.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7bv2.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7bv2.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7bv2.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7bv2.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7bv2.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
✓
| 6m71.1.A | RNA-directed RNA polymerase
SARS-Cov-2 RNA-dependent RNA polymerase in complex with cofactors | 0.84 | 0.00 | 100.00 | 1.00 | 1-932 | EM | 0.00 | monomer | | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6m71.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6m71.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6m71.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6m71.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6m71.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6m71.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6m71.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6m71.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6m71.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 6m71.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 6m71.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6m71.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7btf.1.A | RNA-directed RNA polymerase
SARS-CoV-2 RNA-dependent RNA polymerase in complex with cofactors in reduced condition | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-1-2-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7btf.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7btf.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7btf.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7btf.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7btf.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7btf.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7btf.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7btf.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7btf.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7btf.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7btf.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7btf.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7bzf.1.A | RNA-directed RNA polymerase
COVID-19 RNA-dependent RNA polymerase post-translocated catalytic complex | 0.85 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7bzf.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7bzf.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7bzf.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7bzf.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7bzf.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7bzf.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7bzf.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7bzf.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7bzf.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7bzf.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7bzf.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7bzf.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
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| 7cyq.1.A | RNA-directed RNA polymerase
Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-1-mer | 8 x ZN, 1 x GDP, 1 x MG | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7cyq.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7cyq.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7cyq.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7cyq.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7cyq.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7cyq.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7cyq.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7cyq.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7cyq.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7cyq.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7cyq.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7cyq.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7c2k.1.A | RNA-directed RNA polymerase
COVID-19 RNA-dependent RNA polymerase pre-translocated catalytic complex | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7c2k.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7c2k.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7c2k.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7c2k.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7c2k.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7c2k.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7c2k.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7c2k.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7c2k.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7c2k.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7c2k.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7c2k.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7dte.1.A | RNA-directed RNA polymerase
SARS-CoV-2 RdRP catalytic complex with T33-1 RNA | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7dte.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7dte.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7dte.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7dte.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7dte.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7dte.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7dte.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7dte.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7dte.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7dte.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7dte.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7dte.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7dfg.1.C | RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase bound to favipiravir | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 1 x 1RP, 2 x ZN, 2 x POP, 4 x MG | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7dfg.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7dfg.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7dfg.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7dfg.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7dfg.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7dfg.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7dfg.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7dfg.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7dfg.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7dfg.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7dfg.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7dfg.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7dok.1.C | RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase (extended conformation) bound to penciclovir | 0.88 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 1 x HCU, 4 x MG, 2 x ZN, 2 x POP | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7dok.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7dok.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7dok.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7dok.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7dok.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7dok.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7dok.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7dok.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7dok.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7dok.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7dok.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7dok.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7doi.1.A | RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase bound to penciclovir. | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 2 x POP, 4 x MG, 1 x HCU | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7doi.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7doi.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7doi.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7doi.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7doi.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7doi.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7doi.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7doi.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7doi.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7doi.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7doi.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7doi.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7d4f.1.D | RNA-directed RNA polymerase
Structure of COVID-19 RNA-dependent RNA polymerase bound to suramin | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-2-1-1-mer | 2 x ZN, 2 x H3U | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7d4f.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7d4f.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7d4f.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7d4f.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7d4f.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7d4f.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7d4f.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7d4f.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7d4f.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7d4f.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7d4f.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7d4f.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7dfh.1.A | RNA-directed RNA polymeras
Structure of COVID-19 RNA-dependent RNA polymerase bound to ribavirin | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 3 x MG, 2 x POP, 1 x RVP, 1 x G-C-U-A-U-G-U-G | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7dfh.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7dfh.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7dfh.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7dfh.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7dfh.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7dfh.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7dfh.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7dfh.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7dfh.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7dfh.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7dfh.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7dfh.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 6yyt.1.A | nsp12
Structure of replicating SARS-CoV-2 polymerase | 0.83 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6yyt.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6yyt.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6yyt.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6yyt.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6yyt.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6yyt.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6yyt.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6yyt.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6yyt.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 6yyt.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 6yyt.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6yyt.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7b3d.1.A | SARS-CoV-2 RNA-dependent RNA polymerase nsp12
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3) | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7b3d.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7b3d.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7b3d.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7b3d.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7b3d.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7b3d.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7b3d.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7b3d.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7b3d.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7b3d.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7b3d.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7b3d.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7oyg.1.A | SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-2-2-2-mer | 4 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7oyg.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7oyg.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7oyg.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7oyg.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7oyg.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7oyg.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7oyg.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7oyg.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7oyg.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7oyg.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7oyg.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7oyg.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7oyg.1.F | SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-2-2-2-mer | 4 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7oyg.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7oyg.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7oyg.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7oyg.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7oyg.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7oyg.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7oyg.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7oyg.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7oyg.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7oyg.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7oyg.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7oyg.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7b3b.1.A | RNA-directed RNA polymerase nsp12
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -3 (structure 1) | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7b3b.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7b3b.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7b3b.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7b3b.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7b3b.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7b3b.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7b3b.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7b3b.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7b3b.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7b3b.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7b3b.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7b3b.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7b3c.1.A | RNA-directed RNA polymerase nsp12
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -4 (structure 2) | 0.81 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7b3c.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7b3c.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7b3c.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7b3c.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7b3c.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7b3c.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7b3c.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7b3c.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7b3c.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7b3c.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7b3c.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7b3c.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 6xqb.1.A | RNA-directed RNA polymerase
SARS-CoV-2 RdRp/RNA complex | 0.73 | | 100.00 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN, 1 x MG, 1 x G-G-G-C-C-C-A, 1 x G-U-G-G-G-C-C-C | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6xqb.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6xqb.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6xqb.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6xqb.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6xqb.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6xqb.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6xqb.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6xqb.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6xqb.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 6xqb.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 6xqb.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6xqb.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7ed5.1.A | RNA-directed RNA polymerase
A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase | 0.87 | | 100.00 | 1.00 | 1-932 | EM | 2.98 | hetero-1-2-1-mer | 2 x ZN, 3 x MG, 3 x AT9 | BLAST | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ed5.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ed5.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ed5.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ed5.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ed5.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ed5.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ed5.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ed5.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ed5.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7ed5.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7ed5.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ed5.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7cxm.1.A | RNA-directed RNA polymerase
Architecture of a SARS-CoV-2 mini replication and transcription complex | 0.87 | | 99.89 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-mer | 8 x ZN, 1 x U-A-A-A-A-U | HHblits | 0.62 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7cxm.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7cxm.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7cxm.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7cxm.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7cxm.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7cxm.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7cxm.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7cxm.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7cxm.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7cxm.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7cxm.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7cxm.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNNNTSRYWEPEFYEAMYTPHTVLQ
|
| 7cxn.1.A | RNA-directed RNA polymerase
Architecture of a SARS-CoV-2 mini replication and transcription complex | 0.86 | | 99.89 | 1.00 | 1-932 | EM | 0.00 | hetero-1-2-1-2-mer | 8 x ZN, 1 x U-A-A-A-A-U | HHblits | 0.62 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7cxn.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7cxn.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7cxn.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7cxn.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7cxn.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7cxn.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7cxn.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7cxn.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7cxn.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7cxn.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7cxn.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7cxn.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNNNTSRYWEPEFYEAMYTPHTVLQ
|
| 7ed5.1.A | RNA-directed RNA polymerase
A dual mechanism of action of AT-527 against SARS-CoV-2 polymerase | 0.87 | | 100.00 | 1.00 | 2-932 | EM | 2.98 | hetero-1-2-1-mer | 2 x ZN, 3 x MG, 3 x AT9 | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ed5.1 -ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ed5.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ed5.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ed5.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ed5.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ed5.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ed5.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ed5.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ed5.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7ed5.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7ed5.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ed5.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
| 7eiz.1.A | RNA-directed RNA polymerase
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading | 0.85 | | 100.00 | 1.00 | 1-929 | EM | 0.00 | hetero-1-2-1-1-1-1-… | 13 x ZN, 1 x MG | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7eiz.1 SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7eiz.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7eiz.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7eiz.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7eiz.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7eiz.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7eiz.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7eiz.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7eiz.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7eiz.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7eiz.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7eiz.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT---
|
| 7bw4.1.A | RNA-directed RNA polymerase
Structure of the RNA-dependent RNA polymerase from SARS-CoV-2 | 0.77 | | 100.00 | 0.99 | 10-932 | EM | 0.00 | hetero-1-2-1-mer | 2 x ZN | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7bw4.1 ---------RVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7bw4.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7bw4.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7bw4.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7bw4.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7bw4.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7bw4.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7bw4.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7bw4.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7bw4.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7bw4.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7bw4.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
|
✓
| 6nur.1.A | NSP12
SARS-Coronavirus NSP12 bound to NSP7 and NSP8 co-factors | 0.77 | 0.00 | 96.35 | 1.00 | 1-931 | EM | 0.00 | monomer | 2 x ZN | HHblits | 0.61 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6nur.1 SADASTFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNEKVAGFAKFLKTNCCRFQEKDEEGNLLDSYFVVKRHTMSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6nur.1 QHEETIYNLVKDCPAVAVHDFFKFRVDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6nur.1 DWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNWYDFGDFVQVAPGCGVPIVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6nur.1 LMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6nur.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6nur.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6nur.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6nur.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6nur.1 KHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 6nur.1 RNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 6nur.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6nur.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL-
|
| 7l1f.1.A | RNA-directed RNA polymerase
SARS-CoV-2 RdRp in complex with 4 Remdesivir monophosphate | 0.71 | | 100.00 | 0.96 | 32-929 | EM | 0.00 | hetero-1-1-1-mer | | HHblits | 0.63 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7l1f.1 -------------------------------YRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7l1f.1 QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7l1f.1 DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7l1f.1 LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7l1f.1 FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7l1f.1 LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7l1f.1 DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7l1f.1 SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7l1f.1 KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7l1f.1 RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW
target TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV 7l1f.1 TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADV
target FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7l1f.1 FHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT---
|
| 8g6r.1.A | nsp12
Porcine epidemic diarrhea virus core polymerase complex | 0.79 | | 60.33 | 0.99 | 4-928 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | HHblits | 0.49 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8g6r.1 ---DMAYLNRVRGSSAARLEPC-NGTDTQHVYRAFDIYNKDVACLGKFLKVNCVRLKNLD----KHDAFYVVKRCTKSAM
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8g6r.1 EHEQSIYSRLEKCGAVAEHDFFTWKDGRAIYGNVCRKDLTEYTMMDLCYALRNFDENNCDVLKSILIKVGACEESYFNNK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8g6r.1 VWFDPVENEDIHRVYALLGTIVSRAMLKCVKFCDAMVEQGIVGVVTLDNQDLNGDFYDFGDFTCSIKGMGIPICTSYYSY
target LMPILTLTRALTAESHVDTDLT-KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFST 8g6r.1 MMPVMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKTALFNKYFKYWGLQYHPNCVDCSDEQCIVHCANFNTLFST
target VFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVA 8g6r.1 TIPITAFGPLCRKCWIDGVPLVTTAGYHFKQLGIVWNNDLNLHSSRLSINELLQFCSDPALLIASSPALVDQRTVCFSVA
target ALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKY 8g6r.1 ALGTGMTNQTVKPGHFNKEFYDFLLEQGFFSEGSELTLKHFFFAQKGDAAVKDFDYYRYNRPTVLDICQARVVYQIVQRY
target FDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAG 8g6r.1 FDIYEGGCITAKEVVVTNLNKSAGYPLNKFGKAGLYYESLSYEEQDELYAYTKRNILPTMTQLNLKYAISGKERARTVGG
target VSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 8g6r.1 VSLLSTMTTRQYHQKHLKSIVNTRGASVVIGTTKFYGGWDNMLKNLIDGVENPCLMGWDYPKCDRALPNMIRMISAMILG
target RKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKY 8g6r.1 SKHTTCCSSTDRFFRLCNELAQVLTEVVYSNGGFYLKPGGTTSGDATTAYANSVFNIFQAVSANVNKLLSVDSNVCHNLE
target VRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKC 8g6r.1 VKQLQRKLYECCYRSTTVDDQFVVEYYGYLRKHFSMMILSDDGVVCYNNDYASLGYVADLNAFKAVLYYQNNVFMSASKC
target WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYAD 8g6r.1 WIEPDINKGPHEFCSQHTMQIVDKDGTYYLPYPDPSRILSAGVFVDDVVKTDAVVLLERYVSLAIDAYPLSKHENPEYKK
target VFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8g6r.1 VFYVLLDWVKHLYKTLNAGVLESFSVTLLEDSTAKFWDESFYANMYEKS----
|
| 8g6r.1.A | nsp12
Porcine epidemic diarrhea virus core polymerase complex | 0.78 | | 60.66 | 0.98 | 6-925 | EM | 0.00 | hetero-1-1-1-mer | 2 x ZN | BLAST | 0.49 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8g6r.1 -----AYLNRVRGSSAARLEPC-NGTDTQHVYRAFDIYNKDVACLGKFLKVNCVRLKNLDKHD----AFYVVKRCTKSAM
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8g6r.1 EHEQSIYSRLEKCGAVAEHDFFTWKDGRAIYGNVCRKDLTEYTMMDLCYALRNFDENNCDVLKSILIKVGACEESYFNNK
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8g6r.1 VWFDPVENEDIHRVYALLGTIVSRAMLKCVKFCDAMVEQGIVGVVTLDNQDLNGDFYDFGDFTCSIKGMGIPICTSYYSY
target LMPILTLTRALTAESHVDTDL-TKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFST 8g6r.1 MMPVMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKTALFNKYFKYWGLQYHPNCVDCSDEQCIVHCANFNTLFST
target VFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVA 8g6r.1 TIPITAFGPLCRKCWIDGVPLVTTAGYHFKQLGIVWNNDLNLHSSRLSINELLQFCSDPALLIASSPALVDQRTVCFSVA
target ALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKY 8g6r.1 ALGTGMTNQTVKPGHFNKEFYDFLLEQGFFSEGSELTLKHFFFAQKGDAAVKDFDYYRYNRPTVLDICQARVVYQIVQRY
target FDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAG 8g6r.1 FDIYEGGCITAKEVVVTNLNKSAGYPLNKFGKAGLYYESLSYEEQDELYAYTKRNILPTMTQLNLKYAISGKERARTVGG
target VSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 8g6r.1 VSLLSTMTTRQYHQKHLKSIVNTRGASVVIGTTKFYGGWDNMLKNLIDGVENPCLMGWDYPKCDRALPNMIRMISAMILG
target RKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKY 8g6r.1 SKHTTCCSSTDRFFRLCNELAQVLTEVVYSNGGFYLKPGGTTSGDATTAYANSVFNIFQAVSANVNKLLSVDSNVCHNLE
target VRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKC 8g6r.1 VKQLQRKLYECCYRSTTVDDQFVVEYYGYLRKHFSMMILSDDGVVCYNNDYASLGYVADLNAFKAVLYYQNNVFMSASKC
target WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYAD 8g6r.1 WIEPDINKGPHEFCSQHTMQIVDKDGTYYLPYPDPSRILSAGVFVDDVVKTDAVVLLERYVSLAIDAYPLSKHENPEYKK
target VFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8g6r.1 VFYVLLDWVKHLYKTLNAGVLESFSVTLLEDSTAKFWDESFYANMY-------
|
| 2ckw.1.A | RNA-DIRECTED RNA POLYMERASE
The 2.3 A resolution structure of the Sapporo virus RNA dependant RNA polymerase. | 0.13 | | 13.65 | 0.36 | 497-890 | X-ray | 2.30 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2ckw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2ckw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2ckw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2ckw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2ckw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2ckw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY-------EDQDALFAYTKRNVI-PTITQMNLKYAISAKN 2ckw.1 ----------------ERTTSCG-PFVQGLKGD-YWDEEQQQYTGVLANHLEQAWDKANKGIAPRNAYKLALKDELRPIE
target -----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAM 2ckw.1 KNKAGKRRLLWGCDAATTLIATAAFKAVATRLQVVTPMTPVAVGINMDSVQMQVMNDSL----KGGVLYCLDYSKWDSTQ
target PNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNA 2ckw.1 NPAVTAASLAILER----FAEPHPIVSCAIEALSS--PAEGYVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQA
target LLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVL 2ckw.1 YESHN---------------------------VPYTGN----VFQVETIHTYGDDCMYSVCPATAS--I-F--HTVLANL
target YYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDG--------TLMIER 2ckw.1 TSYGLKPTAADKSDAIKP--TNTPVFLKRTFTQ--TPH--GIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARSAQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2ckw.1 LENALAYAS---QHGPVMFDTVRQIAIKTAQG------------------------------------------
|
| 2b43.1.A | non-structural polyprotein
Crystal structure of the Norwalk virus RNA dependent RNA polymerase from strain Hu/NLV/Dresden174/1997/GE | 0.12 | | 13.43 | 0.36 | 497-891 | X-ray | 2.30 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2b43.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2b43.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2b43.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2b43.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2b43.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2b43.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMS---YEDQDALFAYTKRNV-IPTITQMNLKYAISA----- 2b43.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEGGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 2b43.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKAHCVTLPIRVGMNM-NEDGPIIFERHSRY---KYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 2b43.1 AVLAAALEIMVKFS----SEPHLAQVVAEDLLS--PSVVDVGDFKISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 2b43.1 N-----L--------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGT-------LMIERF 2b43.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--D-PA-GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2b43.1 MSLLGEAA---LHGPAFYSKISKLVIAELKEG-----------------------------------------
|
| 4lq9.1.A | RNA-dependent RNA-polymerase
Crystal structure of human norovirus RNA-dependent RNA-polymerase in complex with NAF2 | 0.12 | | 13.43 | 0.36 | 497-891 | X-ray | 2.04 | monomer | 2 x 21D, 1 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4lq9.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4lq9.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4lq9.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4lq9.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4lq9.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4lq9.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMS---YEDQDALFAYTKRNV-IPTITQMNLKYAISA----- 4lq9.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEGGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4lq9.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKAHCVTLPIRVGMNM-NEDGPIIFERHSRY---KYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4lq9.1 AVLAAALEIMVKFS----SEPHLAQVVAEDLLS--PSVVDVGDFKISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4lq9.1 N-----L--------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGT-------LMIERF 4lq9.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--D-PA-GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4lq9.1 MSLLGEAA---LHGPAFYSKISKLVIAELKEG-----------------------------------------
|
| 4lq3.1.A | RNA-dependent RNA-polymerase
Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDS | 0.13 | | 13.43 | 0.36 | 497-891 | X-ray | 2.60 | monomer | 4 x 20V, 1 x MG, 1 x G-G | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4lq3.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4lq3.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4lq3.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4lq3.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4lq3.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4lq3.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMS---YEDQDALFAYTKRNV-IPTITQMNLKYAISA----- 4lq3.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEGGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4lq3.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKAHCVTLPIRVGMNM-NEDGPIIFERHSRY---KYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4lq3.1 AVLAAALEIMVKFS----SEPHLAQVVAEDLLS--PSVVDVGDFKISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4lq3.1 N-----L--------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGT-------LMIERF 4lq3.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--D-PA-GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4lq3.1 MSLLGEAA---LHGPAFYSKISKLVIAELKEG-----------------------------------------
|
| 2uuw.1.A | RNA-DIRECTED RNA POLYMERASE
2.75 angstrom structure of the D347G D348G mutant structure of Sapporo Virus RdRp Polymerase | 0.12 | | 13.13 | 0.36 | 497-890 | X-ray | 2.76 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2uuw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2uuw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2uuw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2uuw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2uuw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2uuw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMS-------YEDQDALFAYTKRNV-IPTITQMNLKYAISAKN 2uuw.1 ----------------ERTTSCG-PFVQGLKG-DYWDEEQQQYTGVLANHLEQAWDKANKGIAPRNAYKLALKDELRPIE
target -----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAM 2uuw.1 KNKAGKRRLLWGCDAATTLIATAAFKAVATRLQVVTPMTPVAVGINMDSVQMQVMNDSL----KGGVLYCLDYSKWDSTQ
target PNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNA 2uuw.1 NPAVTAASLAILERF----AEPHPIVSCAIEALSS--PAEGYVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQA
target LLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVL 2uuw.1 YESHN---------------------------VPYTGN----VFQVETIHTYGGGCMYSVCPATAS--IF---HTVLANL
target YYQNNVFMSEAK--CWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD--------GTLMI 2uuw.1 TSYGLKPTAADKSDAIKP----TNTPVFLKRTFTQT--PH--GIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARS
target ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2uuw.1 AQLENALAYAS---QHGPVMFDTVRQIAIKTAQG------------------------------------------
|
| 2wk4.1.A | PROTEASE-POLYMERASE P70
Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase | 0.12 | | 13.13 | 0.36 | 497-890 | X-ray | 2.98 | homo-dimer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2wk4.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2wk4.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2wk4.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2wk4.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2wk4.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2wk4.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMS-------YEDQDALFAYTKRNV-IPTITQMNLKYAISAKN 2wk4.1 ----------------ERTTSCG-PFVQGLKG-DYWDEEQQQYTGVLANHLEQAWDKANKGIAPRNAYKLALKDELRPIE
target -----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAM 2wk4.1 KNKAGKRRLLWGCDAATTLIATAAFKAVATRLQVVTPMTPVAVGINMDSVQMQVMNDSL----KGGVLYCLDYSKWDSTQ
target PNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNA 2wk4.1 NPAVTAASLAILERF----AEPHPIVSCAIEALSS--PAEGYVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQA
target LLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVL 2wk4.1 YESHN---------------------------VPYTGN----VFQVETIHTYGGGCMYSVCPATAS--IF---HTVLANL
target YYQNNVFMSEAK--CWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD--------GTLMI 2wk4.1 TSYGLKPTAADKSDAIKP----TNTPVFLKRTFTQT--PH--GIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARS
target ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2wk4.1 AQLENALAYAS---QHGPVMFDTVRQIAIKTAQG------------------------------------------
|
| 2wk4.1.B | PROTEASE-POLYMERASE P70
Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase | 0.12 | | 13.13 | 0.36 | 497-890 | X-ray | 2.98 | homo-dimer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2wk4.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2wk4.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2wk4.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2wk4.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2wk4.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2wk4.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMS-------YEDQDALFAYTKRNV-IPTITQMNLKYAISAKN 2wk4.1 ----------------ERTTSCG-PFVQGLKG-DYWDEEQQQYTGVLANHLEQAWDKANKGIAPRNAYKLALKDELRPIE
target -----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAM 2wk4.1 KNKAGKRRLLWGCDAATTLIATAAFKAVATRLQVVTPMTPVAVGINMDSVQMQVMNDSL----KGGVLYCLDYSKWDSTQ
target PNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNA 2wk4.1 NPAVTAASLAILERF----AEPHPIVSCAIEALSS--PAEGYVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQA
target LLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVL 2wk4.1 YESHN---------------------------VPYTGN----VFQVETIHTYGGGCMYSVCPATAS--IF---HTVLANL
target YYQNNVFMSEAK--CWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD--------GTLMI 2wk4.1 TSYGLKPTAADKSDAIKP----TNTPVFLKRTFTQT--PH--GIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARS
target ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2wk4.1 AQLENALAYAS---QHGPVMFDTVRQIAIKTAQG------------------------------------------
|
| 3uqs.1.A | RNA-dependent RNA polymerase
Crystal structures of murine norovirus RNA-dependent RNA polymerase | 0.11 | | 14.46 | 0.36 | 497-889 | X-ray | 2.00 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3uqs.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3uqs.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3uqs.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3uqs.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3uqs.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3uqs.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISA----- 3uqs.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3uqs.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGPF-IFARHAN---FRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3uqs.1 AILKRAGDIMVR----LSPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3uqs.1 RV-------------------------D-----P----DIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFM-SEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIER 3uqs.1 -YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3uqs.1 LMALLGEAAM---HGEKYYRTVASRVSKEAA-------------------------------------------
|
| 3ur0.4.E | RNA-dependent RNA polymerase
Crystal structures of murine norovirus RNA-dependent RNA polymerase in complex with Suramin | 0.12 | | 14.46 | 0.36 | 497-889 | X-ray | 2.45 | homo-hexamer | 6 x SVR | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3ur0.4 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3ur0.4 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3ur0.4 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3ur0.4 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3ur0.4 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3ur0.4 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISA----- 3ur0.4 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3ur0.4 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGPF-IFARHAN---FRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3ur0.4 AILKRAGDIMVR----LSPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3ur0.4 RV-------------------------D-----P----DIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFM-SEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIER 3ur0.4 -YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3ur0.4 LMALLGEAAM---HGEKYYRTVASRVSKEAA-------------------------------------------
|
| 4nru.1.A | RNA dependent RNA polymerase
Murine Norovirus RNA-dependent-RNA-polymerase in complex with Compound 6, a suramin derivative | 0.11 | | 14.46 | 0.36 | 497-889 | X-ray | 2.30 | monomer | 1 x 2NG, 1 x MG | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nru.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nru.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nru.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nru.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nru.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nru.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISA----- 4nru.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4nru.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGPF-IFARHAN---FRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4nru.1 AILKRAGDIMVR----LSPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4nru.1 RV-------------------------D-----P----DIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFM-SEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIER 4nru.1 -YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nru.1 LMALLGEAAM---HGEKYYRTVASRVSKEAA-------------------------------------------
|
| 4o4r.1.A | RNA-dependent-RNA-polymerase
Murine Norovirus RdRp in complex with PPNDS | 0.12 | | 14.46 | 0.36 | 497-889 | X-ray | 2.40 | monomer | 2 x 20V | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4o4r.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4o4r.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4o4r.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4o4r.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4o4r.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4o4r.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISA----- 4o4r.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4o4r.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGPF-IFARHAN---FRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4o4r.1 AILKRAGDIMVR----LSPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4o4r.1 RV-------------------------D-----P----DIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFM-SEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIER 4o4r.1 -YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4o4r.1 LMALLGEAAM---HGEKYYRTVASRVSKEAA-------------------------------------------
|
| 1sh2.1.A | RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (Metal-free, Centered Orthorhombic) | 0.12 | | 13.17 | 0.36 | 497-890 | X-ray | 2.30 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1sh2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1sh2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1sh2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1sh2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1sh2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1sh2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSYE---DQDALFAYTKRNVI-PTITQMNLKYAISA----- 1sh2.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEEGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 1sh2.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKTHCVTLPIRVGMNMN-EDGPIIFERHSR---YRYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 1sh2.1 AVLAAALEIMVKF----SSEPHLAQVVAEDLLS--PSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 1sh2.1 NL-------------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTL-------MIERF 1sh2.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--DPA--GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1sh2.1 MSLLGEAA---LHGPAFYSKISKLVIAELKE------------------------------------------
|
| 1sh3.2.A | RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form) | 0.13 | | 13.17 | 0.36 | 497-890 | X-ray | 2.95 | monomer | 1 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1sh3.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1sh3.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1sh3.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1sh3.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1sh3.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1sh3.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSYE---DQDALFAYTKRNVI-PTITQMNLKYAISA----- 1sh3.2 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEEGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 1sh3.2 GKIKKRLLWGSDLATMIRCARAFGGLMDELKTHCVTLPIRVGMNMN-EDGPIIFERHSR---YRYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 1sh3.2 AVLAAALEIMVKF----SSEPHLAQVVAEDLLS--PSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 1sh3.2 NL-------------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTL-------MIERF 1sh3.2 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--DPA--GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1sh3.2 MSLLGEAA---LHGPAFYSKISKLVIAELKE------------------------------------------
|
| 1sh3.1.A | RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form) | 0.13 | | 13.17 | 0.36 | 497-890 | X-ray | 2.95 | monomer | 1 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1sh3.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1sh3.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1sh3.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1sh3.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1sh3.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1sh3.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSYE---DQDALFAYTKRNVI-PTITQMNLKYAISA----- 1sh3.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEEGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 1sh3.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKTHCVTLPIRVGMNMN-EDGPIIFERHSR---YRYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 1sh3.1 AVLAAALEIMVKF----SSEPHLAQVVAEDLLS--PSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 1sh3.1 NL-------------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTL-------MIERF 1sh3.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--DPA--GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1sh3.1 MSLLGEAA---LHGPAFYSKISKLVIAELKE------------------------------------------
|
| 1sh0.1.A | RNA Polymerase
Crystal Structure of Norwalk Virus Polymerase (Triclinic) | 0.13 | | 13.17 | 0.36 | 497-890 | X-ray | 2.17 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1sh0.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1sh0.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1sh0.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1sh0.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1sh0.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1sh0.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSYE---DQDALFAYTKRNVI-PTITQMNLKYAISA----- 1sh0.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEEGKNMTPVYTGALKDELVKTDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 1sh0.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKTHCVTLPIRVGMNMN-EDGPIIFERHSR---YRYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 1sh0.1 AVLAAALEIMVKF----SSEPHLAQVVAEDLLS--PSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 1sh0.1 NL-------------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTL-------MIERF 1sh0.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTR--DPA--GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1sh0.1 MSLLGEAA---LHGPAFYSKISKLVIAELKE------------------------------------------
|
| 3h5x.1.A | RNA dependent RNA polymerase
Crystal Structure of 2'-amino-2'-deoxy-cytidine-5'-triphosphate bound to Norovirus GII RNA polymerase | 0.12 | | 12.87 | 0.36 | 497-890 | X-ray | 1.77 | monomer | 4 x MN, 1 x CSG, 1 x G-C-C-C-G-G-G, 1 x U-G-C-C-C-G-G-G-C | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3h5x.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3h5x.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3h5x.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3h5x.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3h5x.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3h5x.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSYE---DQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3h5x.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEEGKNMTPVYTGALKDELVKTDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3h5x.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKTHCVTLPIRVGMNMN-EDGPIIFERHSR---YRYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3h5x.1 AVLAAALEIMVKF----SSEPHLAQVVAEDLLS--PSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3h5x.1 NL-------------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGT-------LMIERF 3h5x.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVT--RD-PA-GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3h5x.1 MSLLGEAAL---HGPAFYSKISKLVIAELKE------------------------------------------
|
| 4qpx.1.A | Polyprotein
NV polymerase post-incorporation-like complex | 0.12 | | 12.87 | 0.36 | 497-890 | X-ray | 1.86 | monomer | 3 x MN, 1 x U-G-C-C-C-G-G-G, 1 x A-C-C-C-G-G-G | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4qpx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4qpx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4qpx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4qpx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4qpx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4qpx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSYE---DQDALFAYTKRNVI-PTITQMNLKYAISAK---- 4qpx.1 ----------------DKTTSSGHPHHM-RKNDCWNGESFTGKLADQASKANLMFEEGKNMTPVYTGALKDELVKTDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4qpx.1 GKIKKRLLWGSDLATMIRCARAFGGLMDELKTHCVTLPIRVGMNMN-EDGPIIFERHSR---YRYHYDADYSRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4qpx.1 AVLAAALEIMVKF----SSEPHLAQVVAEDLLS--PSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSE-VT
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4qpx.1 NL-------------------------S---------PDIIQANSLFSFYGDDEIVSTDIK-------LDPEKLTAKLKE
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGT-------LMIERF 4qpx.1 YGLKPTRPDKTEGPLVISEDLNGLTFLRRTVT--RD-PA-GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4qpx.1 MSLLGEAAL---HGPAFYSKISKLVIAELKE------------------------------------------
|
| 1khv.1.A | RNA-DIRECTED RNA POLYMERASE
Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Lu3+ | 0.12 | | 15.06 | 0.36 | 497-881 | X-ray | 2.50 | monomer | 1 x LU | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1khv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1khv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1khv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1khv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1khv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1khv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSY---EDQDALFAYTKRNV-IPTITQMNLKYAISAKN--- 1khv.1 ----------------DLSTSCG-PFVPGKKIDHVKDGVMDQVLAKHLYKCWSVANSGKALHHIYACGLKDELRPLDKVK
target --RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 1khv.1 EGKKRLLWGCDVGVAVCAAAVFHNICYKLKMVARFGPIAVGVDMTSRDVDVIINNLTSK--ASDFLCLDYSKWDSTMSPC
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 1khv.1 VVRLAIDILADC----CEQTELTKSVVLTL--KSHPMTILDAMIVQTKRGLPSGMPFTSVINSICHWLLWSAAVYKSCAE
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 1khv.1 IG---L--------------------H---------CSNLYEDAPFYTYGDDGVYAMTPMMVS-----LLPAIIENLRDY
target NNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD---------GTLMIERFV 1khv.1 GLSPTAADKTEFIDVCPLNKISFLKRTFELT--DI--GWVSKLDKSSILRQLEWSKTTSRHMVIEETYDLAKEERGVQLE
target SLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1khv.1 ELQVAAA---AHGQEFFNFVC---------------------------------------------------
|
| 1khv.2.A | RNA-DIRECTED RNA POLYMERASE
Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Lu3+ | 0.11 | | 15.06 | 0.36 | 497-881 | X-ray | 2.50 | monomer | 1 x LU | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1khv.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1khv.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1khv.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1khv.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1khv.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1khv.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-SMSY---EDQDALFAYTKRNV-IPTITQMNLKYAISAKN--- 1khv.2 ----------------DLSTSCG-PFVPGKKIDHVKDGVMDQVLAKHLYKCWSVANSGKALHHIYACGLKDELRPLDKVK
target --RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 1khv.2 EGKKRLLWGCDVGVAVCAAAVFHNICYKLKMVARFGPIAVGVDMTSRDVDVIINNLTSK--ASDFLCLDYSKWDSTMSPC
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 1khv.2 VVRLAIDILADC----CEQTELTKSVVLTL--KSHPMTILDAMIVQTKRGLPSGMPFTSVINSICHWLLWSAAVYKSCAE
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 1khv.2 IG---L--------------------H---------CSNLYEDAPFYTYGDDGVYAMTPMMVS-----LLPAIIENLRDY
target NNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD---------GTLMIERFV 1khv.2 GLSPTAADKTEFIDVCPLNKISFLKRTFELT--DI--GWVSKLDKSSILRQLEWSKTTSRHMVIEETYDLAKEERGVQLE
target SLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1khv.2 ELQVAAA---AHGQEFFNFVC---------------------------------------------------
|
| 3upf.1.A | RNA-dependent RNA polymerase
Crystal structure of murine norovirus RNA-dependent RNA polymerase bound to NF023 | 0.11 | | 14.16 | 0.36 | 497-889 | X-ray | 2.60 | monomer | 1 x 0BU | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3upf.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3upf.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3upf.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3upf.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3upf.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3upf.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISA----- 3upf.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3upf.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3upf.1 AILKRAGDIMVR----LSPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3upf.1 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMS-EAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIER 3upf.1 -YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3upf.1 LMALLGEAAM---HGEKYYRTVASRVSKEAA-------------------------------------------
|
| 3upf.2.A | RNA-dependent RNA polymerase
Crystal structure of murine norovirus RNA-dependent RNA polymerase bound to NF023 | 0.12 | | 14.16 | 0.36 | 497-889 | X-ray | 2.60 | monomer | 1 x 0BU | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3upf.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3upf.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3upf.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3upf.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3upf.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3upf.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISA----- 3upf.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target -KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3upf.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3upf.2 AILKRAGDIMVR----LSPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3upf.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMS-EAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIER 3upf.2 -YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3upf.2 LMALLGEAAM---HGEKYYRTVASRVSKEAA-------------------------------------------
|
| 4zp9.1.A | RNA-dependent RNA polymerase
Coxsackievirus B3 Polymerase - F364I mutant | 0.12 | | 16.67 | 0.35 | 496-888 | X-ray | 1.80 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zp9.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zp9.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zp9.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zp9.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zp9.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zp9.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4zp9.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4zp9.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4zp9.1 CLKMILEKL----G-YTHKETNYIDY---LCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4zp9.1 ------------------------ID-----------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4zp9.1 MTPADKGECINEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAWH---N
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zp9.1 GEHEYEEFIRKIRSVP--------------------------------------------
|
| 2uut.1.A | RNA-DIRECTED RNA POLYMERASE
The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase | 0.12 | | 13.60 | 0.36 | 497-890 | X-ray | 2.40 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2uut.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2uut.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2uut.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2uut.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2uut.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2uut.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMS-------YEDQDALFAYTKRNV-IPTITQMNLKYAISAKN 2uut.1 ----------------ERTTSCG-PFVQGLKG-DYWDEEQQQYTGVLANHLEQAWDKANKGIAPRNAYKLALKDELRPIE
target -----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAM 2uut.1 KNKAGKRRLLWGCDAATTLIATAAFKAVATRLQVVTPMTPVAVGINMDSVQMQVMNDSL----KGGVLYCLDYSKWDSTQ
target PNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNA 2uut.1 NPAVTAASLAILERF----AEPHPIVSCAIEALSS--PAEGYVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQA
target LLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVL 2uut.1 YESHN---V------------------------PYTGN----VFQVETIHTYGGDCMYSVCPATAS--IF---HTVLANL
target YYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD--------GTLMIER 2uut.1 T-SYGLKPTAIKPT-------NTPVFLKRTFTQT--PH--GIRALLDITSITRQFYWLKANRTSDPSSPPAFDRQARSAQ
target FVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2uut.1 LENALAYASQ---HGPVMFDTVRQIAIKTAQG------------------------------------------
|
| 3nai.1.A | RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.56 | homo-dimer | 2 x MG, 2 x URF, 4 x MN3 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3nai.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3nai.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3nai.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3nai.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3nai.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3nai.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3nai.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3nai.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3nai.1 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3nai.1 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3nai.1 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3nai.1 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3qid.2.B | RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.50 | homo-dimer | 2 x MN3 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qid.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qid.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qid.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qid.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qid.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qid.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3qid.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3qid.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3qid.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3qid.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3qid.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qid.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3sfu.1.A | RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin | 0.11 | | 14.16 | 0.36 | 497-888 | X-ray | 2.50 | homo-dimer | 2 x RBV, 2 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3sfu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3sfu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3sfu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3sfu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3sfu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3sfu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3sfu.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3sfu.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3sfu.1 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3sfu.1 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3sfu.1 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3sfu.1 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3sfu.2.A | RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.50 | homo-dimer | 2 x RBV, 2 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3sfu.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3sfu.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3sfu.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3sfu.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3sfu.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3sfu.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3sfu.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3sfu.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3sfu.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3sfu.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3sfu.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3sfu.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3sfu.2.B | RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with ribavirin | 0.11 | | 14.16 | 0.36 | 497-888 | X-ray | 2.50 | homo-dimer | 2 x RBV, 2 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3sfu.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3sfu.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3sfu.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3sfu.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3sfu.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3sfu.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3sfu.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3sfu.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3sfu.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3sfu.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3sfu.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3sfu.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3sfg.1.A | RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU) | 0.11 | | 14.16 | 0.36 | 497-888 | X-ray | 2.21 | homo-dimer | 2 x 2TU, 2 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3sfg.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3sfg.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3sfg.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3sfg.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3sfg.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3sfg.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3sfg.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3sfg.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3sfg.1 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3sfg.1 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3sfg.1 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3sfg.1 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3sfg.2.A | RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU) | 0.11 | | 14.16 | 0.36 | 497-888 | X-ray | 2.21 | homo-dimer | 2 x 2TU, 2 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3sfg.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3sfg.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3sfg.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3sfg.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3sfg.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3sfg.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3sfg.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3sfg.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3sfg.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3sfg.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3sfg.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3sfg.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3sfg.2.B | RNA polymerase
crystal structure of murine norovirus RNA dependent RNA polymerase in complex with 2thiouridine(2TU) | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.21 | homo-dimer | 2 x 2TU, 2 x MG | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3sfg.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3sfg.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3sfg.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3sfg.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3sfg.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3sfg.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3sfg.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3sfg.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3sfg.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3sfg.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3sfg.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3sfg.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3qid.1.A | RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.50 | homo-dimer | 2 x MN3 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qid.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qid.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qid.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qid.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qid.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qid.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3qid.1 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3qid.1 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3qid.1 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3qid.1 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3qid.1 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qid.1 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3qid.2.A | RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.50 | homo-dimer | 2 x MN3 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qid.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qid.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qid.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qid.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qid.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qid.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3qid.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3qid.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3qid.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3qid.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3qid.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qid.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3nai.2.B | RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.56 | homo-dimer | 2 x MG, 2 x URF, 4 x MN3 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3nai.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3nai.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3nai.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3nai.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3nai.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3nai.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3nai.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3nai.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3nai.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3nai.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3nai.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3nai.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 3nai.2.A | RNA dependent RNA polymerase
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase | 0.12 | | 14.16 | 0.36 | 497-888 | X-ray | 2.56 | homo-dimer | 2 x MG, 2 x URF, 4 x MN3 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3nai.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3nai.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3nai.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3nai.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3nai.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3nai.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLY----YDSMSYEDQDALFAYTKRNVI-PTITQMNLKYAISAK---- 3nai.2 ----------------DKNTSSGYPYHKQKSKDWTGSAFIGDL-GDQATHANNMYEMGKSMRPIYTAALKDELVKPDKIY
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3nai.2 GKIKKRLLWGSDLGTMIRAARAFGPFCDALKETCIFNPIRVGMSMNEDGP-FIFARHA---NFRYHMDADYTRWDSTQQR
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3nai.2 AILKRAGDIMVRL----SPEPDLARVVMDDLL--APSLLDVGDYKIVVEEGLPSGCPCTTQLNSLAHWILTLCAMVEV-T
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3nai.2 RV-------------------------D---------PDIVMQESEFSFYGDDEVVSTNLEL-------DMVKYTMALRR
target QNNVFMSEAKCWT--ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTD-------GTLMIERF 3nai.2 YGLLPTRADKEEGPLERRQTLQGISFLRRAIV--GD-Q-FGWYGRLDRASIDRQLLWTKGPNHQNPFETLPGHAQRPSQL
target VSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3nai.2 MALLGEAA---MHGEKYYRTVASRVSKEA--------------------------------------------
|
| 4zp6.1.A | Genome polyprotein
Coxsackievirus B3 Polymerase - F364A mutant | 0.12 | | 16.72 | 0.35 | 496-888 | X-ray | 1.65 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zp6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zp6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zp6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zp6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zp6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zp6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWG--KARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4zp6.1 ---------------LDLTTSAGYPYVALGIKKRDILSK--KTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4zp6.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4zp6.1 ACLKMILEKLG-----YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4zp6.1 ----------------------GID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKGYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4zp6.1 IMTPADKGECANEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zp6.1 NGEHEYEEFIRKIRSVP--------------------------------------------
|
| 4y2a.1.A | 3D polymerase
Crystal Structure of Coxsackie Virus B3 3D polymerase in complex with GPC-N114 inhibitor | 0.12 | | 16.67 | 0.35 | 496-888 | X-ray | 2.90 | monomer | 1 x 1FS | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y2a.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y2a.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y2a.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y2a.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y2a.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y2a.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK-ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4y2a.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4y2a.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4y2a.1 CLKMLLEKLG-----YTHKETNYI---DYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4y2a.1 ----------------------ID-------------LDQFRMIAYGDDVIASYPWPI-------DASLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4y2a.1 MTPADKGECFNEVTWTNATFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y2a.1 GEHEYEEFIRKIRSVP--------------------------------------------
|
| 3cdu.1.A | RNA-directed RNA polymerase 3D-POL
Crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase (3Dpol) in complex with a pyrophosphate | 0.12 | | 17.03 | 0.35 | 496-888 | X-ray | 2.10 | monomer | 1 x POP | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3cdu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3cdu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3cdu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3cdu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3cdu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3cdu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAIS-----AKNRA 3cdu.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 3cdu.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3cdu.1 CLKMLLEKLG-----YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3cdu.1 ----------------------ID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKG-YGL
target FM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 3cdu.1 IMTPADKGECFNEVTWTNATFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3cdu.1 NGEHEYEEFIRKIRSVP--------------------------------------------
|
| 4zp8.1.A | RNA-dependent RNA polymerase
Coxsackievirus B3 Polymerase - F364L mutant | 0.12 | | 16.05 | 0.35 | 496-888 | X-ray | 1.89 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zp8.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zp8.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zp8.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zp8.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zp8.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zp8.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4zp8.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4zp8.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4zp8.1 CLKMILEKL----G-YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4zp8.1 --------------------KGID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4zp8.1 MTPADKGECLNEVTWTNVTFLKRYFRADE-QYPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zp8.1 GEHEYEEFIRKIRSVP--------------------------------------------
|
| 4zp7.1.A | Genome polyprotein
Coxsackievirus B3 Polymerase - F364V mutant | 0.12 | | 16.41 | 0.35 | 496-887 | X-ray | 1.90 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zp7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zp7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zp7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zp7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zp7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zp7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4zp7.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4zp7.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4zp7.1 CLKMILEKL----GY-THKETNYIDY---LCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4zp7.1 --------------------KGID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4zp7.1 MTPADKGECVNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zp7.1 GEHEYEEFIRKIRSV---------------------------------------------
|
| 4wfx.1.A | RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F232L Mutant - NaCl Crystal Form | 0.12 | | 16.72 | 0.35 | 496-887 | X-ray | 1.81 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wfx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wfx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wfx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wfx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wfx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wfx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4wfx.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4wfx.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIALDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4wfx.1 CLKMILEKLG-----YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4wfx.1 ----------------------ID-------------LDQFRMIAYGDDVIASYPWPI-------DASLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4wfx.1 MTPADKGECFNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT--Q---DHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wfx.1 GEHEYEEFIRKIRSV---------------------------------------------
|
| 4wfy.1.A | RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F232L Mutant - AmSO4 Crystal Form | 0.12 | | 16.72 | 0.35 | 496-887 | X-ray | 2.06 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wfy.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wfy.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wfy.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wfy.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wfy.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wfy.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4wfy.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4wfy.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIALDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4wfy.1 CLKMILEKLG-----YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4wfy.1 ----------------------ID-------------LDQFRMIAYGDDVIASYPWPI-------DASLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4wfy.1 MTPADKGECFNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT--Q---DHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wfy.1 GEHEYEEFIRKIRSV---------------------------------------------
|
| 4zpc.1.A | RNA-dependent RNA polymerase
Coxsackievirus B3 Polymerase - A341G mutant | 0.12 | | 16.72 | 0.35 | 496-887 | X-ray | 1.59 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zpc.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zpc.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zpc.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zpc.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zpc.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zpc.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4zpc.1 ---------------LDLTTSAGYPYVALGIKKRDILS-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4zpc.1 RLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4zpc.1 CLKMILEKLG-----YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4zpc.1 ----------------------ID-------------LDQFRMIAYGDDVIASYPWP-------IDGSLLAEAGKGYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4zpc.1 MTPADKGECFNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zpc.1 GEHEYEEFIRKIRSV---------------------------------------------
|
| 1xr5.1.A | Genome polyprotein
Crystal Structure of the RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 14 | 0.11 | | 18.07 | 0.34 | 495-887 | X-ray | 2.80 | monomer | 1 x SM | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1xr5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1xr5.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1xr5.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1xr5.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1xr5.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1xr5.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWG--KARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NR 1xr5.1 --------------PIDITTSAGFPYVSLGIKKRDILNK--ETQDTEKMKFYLDKYGIDLPLVTYIKDELRSVDKVRLGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 1xr5.1 SRLIEASSLNDSVNMRMKLGNLYKAFHQNPGVLTGSAVGCDPD-VFWSVIPCLM-----DGHLMAFDYSNFDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 1xr5.1 VCLEKVLTKL----GF---AGSSLIQS---ICNTHHIFRDEIYVVEGGMPSGCSGTSIFNSMINNIIIRTLILDAYKG--
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 1xr5.1 -------------------------ID-----------LDKLKILAYGDDLIVSYPYEL-------DPQVLATLGKNYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 1xr5.1 TITPPDKSETFTKMTWENLTFLKRYFKPDQQ-FPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCMLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1xr5.1 SGEKEYNEFIQKIRTT---------------------------------------------
|
| 4y34.1.A | 3D polymerase
Crystal Structure of Coxsackievirus B3 3D polymerase in complex with GPC-N143 | 0.12 | | 16.77 | 0.35 | 496-888 | X-ray | 2.70 | monomer | 1 x 45Z | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y34.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y34.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y34.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y34.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y34.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y34.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4y34.1 ---------------LDLTTSAGYPYVALGIKKRDIL-S-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4y34.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4y34.1 ACLKMILEKL----G-YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4y34.1 ---------------------KGID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKG-YG
target VFM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4y34.1 LIMTPADKGECFNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y34.1 HNGEHEYEEFIRKIRSVP--------------------------------------------
|
| 3ddk.1.A | RNA polymerase B3 3Dpol
Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase | 0.12 | | 16.46 | 0.35 | 496-887 | X-ray | 2.25 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3ddk.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3ddk.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3ddk.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3ddk.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3ddk.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3ddk.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 3ddk.1 ---------------LDLTTSAGYPYVALGIKKRDILSK--KTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 3ddk.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 3ddk.1 ACLKMILEKL----G-YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 3ddk.1 ---------------------KGID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKGYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 3ddk.1 IMTPADKGECFNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT--Q---DHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3ddk.1 NGEHEYEEFIRKIRSV---------------------------------------------
|
| 4k4x.1.A | RNA-dependent RNA polymerase
Coxsackievirus B3 polymerase elongation complex (r2_form), rna | 0.12 | | 16.77 | 0.35 | 496-888 | X-ray | 2.37 | monomer | 1 x MG, 1 x G-G | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4k4x.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4k4x.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4k4x.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4k4x.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4k4x.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4k4x.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4k4x.1 ---------------LDLTTSAGYPYVALGIKKRDILSK--KTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4k4x.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4k4x.1 ACLKMILEKL----GY-THKETNYI---DYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKV-----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4k4x.1 --------------------YKGID-------------LDQFRMIAYGDDVIASYPWPI-------DASLLAEAGKG-YG
target VFM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4k4x.1 LIMTPADKGECFNEVTWTNVTFLKRYFRADE-QYPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAWH--
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4k4x.1 -NGEHEYEEFIRKIRSVP--------------------------------------------
|
| 4zpd.1.A | RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - A345V mutant | 0.12 | | 16.46 | 0.35 | 496-887 | X-ray | 1.80 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zpd.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zpd.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zpd.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zpd.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zpd.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zpd.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4zpd.1 ---------------LDLTTSAGYPYVALGIKKRDIL-S-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4zpd.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4zpd.1 ACLKMILEKLG-----YTHKETNYI---DYLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4zpd.1 ---------------------KGID-------------LDQFRMIAYGDDVIASYPWPI-------DASLLVEAGKGYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4zpd.1 IMTPADKGECFNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zpd.1 NGEHEYEEFIRKIRSV---------------------------------------------
|
| 4zpb.1.A | RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F364W mutant | 0.12 | | 16.46 | 0.35 | 496-887 | X-ray | 1.80 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zpb.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zpb.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zpb.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zpb.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zpb.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zpb.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4zpb.1 ---------------LDLTTSAGYPYVALGIKKRDIL-S-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4zpb.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4zpb.1 ACLKMILEKL----G-YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4zpb.1 ----------------------GID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKGYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4zpb.1 IMTPADKGECWNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zpb.1 NGEHEYEEFIRKIRSV---------------------------------------------
|
| 4zpa.1.A | RNA-directed RNA polymerase
Coxsackievirus B3 Polymerase - F364Y mutant | 0.12 | | 16.82 | 0.34 | 496-887 | X-ray | 2.66 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4zpa.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4zpa.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4zpa.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4zpa.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4zpa.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4zpa.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4zpa.1 ---------------LDLTTSAGYPYVALGIKKRDIL-S-KKTKDLTKLKECMDKYGLNLPMVTYVKDELRSIEKVAKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4zpa.1 SRLIEASSLNDSVAMRQTFGNLYKTFHLNPGVVTGSAVGCDPD-LFWSKIPVML-----DGHLIAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4zpa.1 ACLKMILEKL----G-YTHKETNYID---YLCNSHHLYRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4zpa.1 ---------------------KGID-------------LDQFRMIAYGDDVIASYPWP-------IDASLLAEAGKG-YG
target VFM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4zpa.1 LIMTPADKGECYNEVTWTNVTFLKRYFRADEQ-YPFLVHPVMPMKDIHESIRWTKDPKNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4zpa.1 HNGEHEYEEFIRKIRSV---------------------------------------------
|
| 6r1i.1.A | Genome polyprotein
Structure of porcine Aichi virus polymerase | 0.12 | | 16.72 | 0.35 | 496-888 | X-ray | 2.63 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6r1i.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6r1i.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6r1i.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6r1i.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6r1i.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6r1i.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDS-----MSYEDQDALFAYTKRNVIPTITQMNLKYAISAKN- 6r1i.1 ---------------IDMNQAAGYPWNTMGRSRRSLFVQQNGIWLPLPELEAEINKTLED--PYYFYSTFLKDELRPTSK
target ----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 6r1i.1 VTLGLTRVVEAAPIHAIIAGRMLLGGLIEYMQANPGKHGSAVGCNPD-LHWTKFFFKFCHY---PQVFDLDYKCFDATLP
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 6r1i.1 SCAFRIVEKHLER----LIG-DERVTRYIE---TIRHSRHVFGNETYEMIGGNPSGCVGTSIINTIINNICVLSALIQH-
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 6r1i.1 ---P------------------------D----F-------SPESFRILAYGDDVIYGCDPPIHP-------SFIKEFYD
target YQNNV-FMSEAKCWTET-DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 6r1i.1 RYTPLVVTPANKTDTFPENSTIYDVTFLKRWFVPDDI-RPFYIHPVMDPDTYEQSVMWLRDGD---FQ---DLVTSLCYL
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6r1i.1 AF---HSGPKTYDRWCTRVRDQV--------------------------------------------
|
| 6r1i.2.A | Genome polyprotein
Structure of porcine Aichi virus polymerase | 0.12 | | 16.72 | 0.35 | 496-888 | X-ray | 2.63 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6r1i.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6r1i.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6r1i.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6r1i.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6r1i.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6r1i.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDS-----MSYEDQDALFAYTKRNVIPTITQMNLKYAISAKN- 6r1i.2 ---------------IDMNQAAGYPWNTMGRSRRSLFVQQNGIWLPLPELEAEINKTLED--PYYFYSTFLKDELRPTSK
target ----RARTVAGVSICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 6r1i.2 VTLGLTRVVEAAPIHAIIAGRMLLGGLIEYMQANPGKHGSAVGCNPD-LHWTKFFFKFCHY---PQVFDLDYKCFDATLP
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 6r1i.2 SCAFRIVEKHLER----LIG-DERVTRYIE---TIRHSRHVFGNETYEMIGGNPSGCVGTSIINTIINNICVLSALIQH-
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 6r1i.2 ---P------------------------D----F-------SPESFRILAYGDDVIYGCDPPIHP-------SFIKEFYD
target YQNNV-FMSEAKCWTET-DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 6r1i.2 RYTPLVVTPANKTDTFPENSTIYDVTFLKRWFVPDDI-RPFYIHPVMDPDTYEQSVMWLRDGD---FQ---DLVTSLCYL
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6r1i.2 AF---HSGPKTYDRWCTRVRDQV--------------------------------------------
|
| 6kwq.1.A | RNA-dependent RNA polymerase
Crystal structure of enterovirus 71 polymerase elongation complex (native form) | 0.12 | | 16.77 | 0.35 | 496-886 | X-ray | 1.76 | monomer | 2 x MG, 1 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6kwq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6kwq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6kwq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6kwq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6kwq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6kwq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 6kwq.1 ---------------IDLHTSAGYPYSALGIKKRDILD-PTTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 6kwq.1 RLIEASSLNDSVYLRMAFGHLYEAFHANPGTITGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWFR
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 6kwq.1 ALELVLREI-----GYSEEAVSLIEG---INHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRALLIKTFKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 6kwq.1 ----------------------ID-------------LDELNMVAYGDDVLASYPFPI-------DCLELAKTGKEYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 6kwq.1 MTPADKSPCFNEVNWGNATFLKRGFLPDE-QFPFLIHPTMPMREIHESIRWTKDARNTQ-----DHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6kwq.1 GKQEYEKFVSTIRS----------------------------------------------
|
| 5y6z.1.A | Genome polyprotein
Crystal structure of the coxsackievirus A16 polymerase elongation complex | 0.11 | | 16.82 | 0.34 | 497-888 | X-ray | 2.50 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5y6z.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5y6z.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5y6z.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5y6z.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5y6z.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5y6z.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWG--KARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 5y6z.1 ----------------DLHTSAGYPYSALGVKKRDILDP-I-TRDTTKMKFYMDKYGLDLPYSTYVKDELRSLDKIRKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 5y6z.1 SRLIEASSLNDSVYLRMTFGHLYETFHANPGTVTGSAVGCNPD-VFWSKLPILLP-----GSLFAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 5y6z.1 RALEVVLREI----G-YPEEAVSLIE---GINHTHHVYRNRTYCVLGGMPSGCSGTSIFNSMINNIIIRTLLIKTFKG--
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 5y6z.1 ---I------------------------D---------LDELHMVAYGDDVLASYPFPI-------DCLELAKTGK-EYG
target VFMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5y6z.1 LTMTPADKSPCFNEVTWENATFLKRGFLPDH-QFPFLIHPTMPMREIHESIRWTKDARNTQ-----DHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5y6z.1 HNGKEEYEKFVSTIRSVP--------------------------------------------
|
| 1raj.1.A | Genome polyprotein
Poliovirus Polymerase with a 68 residue N-terminal truncation | 0.10 | | 16.72 | 0.35 | 496-889 | X-ray | 2.50 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1raj.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1raj.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1raj.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1raj.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1raj.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1raj.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NRA 1raj.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 1raj.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 1raj.1 ALKMVLEKIG----FGD-R-VDYID---YLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYK----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 1raj.1 -G----------------------ID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKD-YGL
target FMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 1raj.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1raj.1 NGEEEYNKFLAKIRSVPI-------------------------------------------
|
| 6lse.1.A | Genome polyprotein
Crystal structure of the enterovirus 71 polymerase elongation complex (C3S6A/C3S6B form) | 0.11 | | 16.51 | 0.34 | 496-887 | X-ray | 2.25 | monomer | 1 x ZN, 1 x POP | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6lse.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6lse.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6lse.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6lse.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6lse.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6lse.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWG--KARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 6lse.1 ---------------IDLHTSAGYPYSALGIKKRDILDS--TTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 6lse.1 SRLIEASSLNDSVYLRMTFGHLYETFHANPGTVTGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 6lse.1 RALELVLREI-----GYSEEAVSLVEGI---NHTHHVYRNKTYCVLGGMPSGMSGTSIFNSMINNIIIRALLIKTFKG--
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 6lse.1 -------------------------ID-----------LDELNMVAYGDDVLASYPFPI-------DCLELARTGKEYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 6lse.1 TMTPADKSPCFNEVNWDNATFLKRGFLPD--EQFPFLIHPTMPMKEIHESIRWTKDARNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6lse.1 HNGKQEYEKFVSAIRSV---------------------------------------------
|
| 4ika.1.A | 3Dpol
Crystal structure of EV71 3Dpol-VPg | 0.12 | | 17.24 | 0.34 | 496-886 | X-ray | 2.70 | hetero-oligomer | 2 x NI | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ika.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ika.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ika.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ika.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ika.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ika.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4ika.1 ---------------IDLHTSAGYPYSALGIKKRDIL-D-PTTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4ika.1 SRLIEASSLNDSVYLRMAFGHLYETFHANPGTITGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4ika.1 RALELVLREI----G-YSEEAISLIEGIN---HTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRALLIKTFKG--
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4ika.1 -------------------------ID-----------LDELNMVAYGDDVLASYPFPI-------DCLELAKTGKEYGL
target VFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4ika.1 TMTPADKSPCFNE--VNWDNATFLKRGFLPDEQ-FPFLIHPTMPMREIHESIRWTKDARNTQ-----DHVRSLCLLAW--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ika.1 -HNGKQEYEKFVSTIRS----------------------------------------------
|
| 5xe0.1.A | Genome polyprotein
Crystal structure of EV-D68-3Dpol in complex with GTP | 0.12 | | 15.63 | 0.34 | 496-886 | X-ray | 2.30 | monomer | 1 x GTP | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5xe0.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5xe0.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5xe0.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5xe0.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5xe0.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5xe0.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 5xe0.1 ---------------LDLTTSAGFPYLLQGKKKRDIFN-RHTRDTTEMTKMLEKYGVDLPFVTFVKDELRSKEKVEKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 5xe0.1 RLIEASSLNDSVAMRVAFGNLYATFHSNPGTATGSAVGCDPD-IFWSKIPILL-----DGEIFAFDYTGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 5xe0.1 CLKKVLIKLG----YTHQ--TSFIDY---LCHSVHLYKDRKYIVNGGMPSGSSGTSIFNTMINNIIIRTLLIRVYKGI--
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 5xe0.1 -----------------------D-------------LDQFKMIAYGDDVIASYPHKI-------DPALLAEAGKH-YGL
target FMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 5xe0.1 VMTPADKGTSFVDTNWENVTFLKRYFRADD-QYPFLIHPVMPMKEIHESIRWTKDPRNTQ-----DHVRSLCYLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5xe0.1 NGEEAYNEFCRKIRS----------------------------------------------
|
| 3n6m.1.A | RNA-dependent RNA polymerase
Crystal structure of EV71 RdRp in complex with GTP | 0.12 | | 16.51 | 0.34 | 496-885 | X-ray | 2.50 | monomer | 1 x NI, 1 x GTP | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3n6m.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3n6m.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3n6m.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3n6m.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3n6m.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3n6m.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 3n6m.1 ---------------IDLHTSAGYPYSALGIKKRDILD-PTTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 3n6m.1 RLIEASSLNDSVYLRMAFGHLYETFHANPGTITGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWFR
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3n6m.1 ALELVLREI----G-YSEGAISLIEGI---NHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRALLIKTFKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3n6m.1 ------------------------ID-----------LDELNMVAYGDDVLASYPFPI-------DCLELAKTGKEYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 3n6m.1 MTPADKSPCFNEVNWDNATFLKRGFLPDE-QFPFLIHPTMPMREIHESIRWTKDARNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3n6m.1 GKQEYEKFVSTIR-----------------------------------------------
|
| 3n6l.1.A | RNA-dependent RNA polymerase
The crystal structure of RNA-dependent RNA polymerase of EV71 virus | 0.12 | | 16.51 | 0.34 | 496-885 | X-ray | 2.60 | monomer | 1 x NI | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3n6l.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3n6l.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3n6l.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3n6l.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3n6l.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3n6l.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 3n6l.1 ---------------IDLHTSAGYPYSALGIKKRDILD-PTTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 3n6l.1 RLIEASSLNDSVYLRMAFGHLYETFHANPGTITGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWFR
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3n6l.1 ALELVLREI----G-YSEGAISLIEGI---NHTHHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRALLIKTFKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3n6l.1 ------------------------ID-----------LDELNMVAYGDDVLASYPFPI-------DCLELAKTGKEYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 3n6l.1 MTPADKSPCFNEVNWDNATFLKRGFLPDE-QFPFLIHPTMPMREIHESIRWTKDARNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3n6l.1 GKQEYEKFVSTIR-----------------------------------------------
|
| 3ol8.4.A | Polymerase
Poliovirus polymerase elongation complex with CTP-Mn | 0.12 | | 15.89 | 0.34 | 496-886 | X-ray | 2.75 | monomer | 1 x ZN, 2 x MN, 1 x POP, 1 x G-G-A-G | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3ol8.4 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3ol8.4 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3ol8.4 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3ol8.4 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3ol8.4 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3ol8.4 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 3ol8.4 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 3ol8.4 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3ol8.4 ALKMVLEKI----GF-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3ol8.4 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKDYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 3ol8.4 MTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3ol8.4 GEEEYNKFLAKIRS----------------------------------------------
|
| 4k4s.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus polymerase elongation complex (r3_form) | 0.12 | | 15.89 | 0.34 | 496-886 | X-ray | 2.40 | monomer | 1 x ZN, 1 x G-G-A-G | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4k4s.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4k4s.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4k4s.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4k4s.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4k4s.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4k4s.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4k4s.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4k4s.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4k4s.1 ALKMVLEKI----GF-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4k4s.1 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKDYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4k4s.1 MTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4k4s.1 GEEEYNKFLAKIRS----------------------------------------------
|
| 4nly.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290E Loop Mutant | 0.12 | | 16.61 | 0.34 | 496-885 | X-ray | 2.30 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nly.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nly.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nly.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nly.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nly.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nly.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4nly.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4nly.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4nly.1 ALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGESGTSIFNSMINNLIIRTLLLKT------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4nly.1 -------------------YKG--ID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YGL
target FMSE-AKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4nly.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nly.1 NGEEEYNKFLAKIR-----------------------------------------------
|
| 1rdr.1.A | POLIOVIRUS 3D POLYMERASE
POLIOVIRUS 3D POLYMERASE | 0.10 | | 16.25 | 0.34 | 496-886 | X-ray | 2.40 | monomer | 2 x CA | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1rdr.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1rdr.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1rdr.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1rdr.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1rdr.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1rdr.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 1rdr.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 1rdr.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 1rdr.1 ALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 1rdr.1 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YGL
target FMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 1rdr.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1rdr.1 NGEEEYNKFLAKIRS----------------------------------------------
|
| 4k4w.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus polymerase elongation complex (r5+2_form) | 0.12 | | 16.25 | 0.34 | 496-886 | X-ray | 2.69 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4k4w.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4k4w.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4k4w.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4k4w.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4k4w.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4k4w.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4k4w.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4k4w.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4k4w.1 ALKMVLEKI----G-FGDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGASGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4k4w.1 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YGL
target FM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4k4w.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4k4w.1 NGEEEYNKFLAKIRS----------------------------------------------
|
| 4nlv.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A/C290F Loop Mutant | 0.12 | | 15.58 | 0.34 | 496-886 | X-ray | 2.30 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4nlv.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4nlv.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4nlv.1 ALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSAFSGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4nlv.1 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKDYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4nlv.1 MTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlv.1 GEEEYNKFLAKIRS----------------------------------------------
|
| 4nlu.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A Loop Mutant | 0.12 | | 15.89 | 0.34 | 496-886 | X-ray | 2.10 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NRA 4nlu.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4nlu.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLM-E----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4nlu.1 ALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSACSGTSIFNSMINNLIIRTLLLKTYKG---
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4nlu.1 ------------------------ID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKDYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4nlu.1 MTPADKSATFETVTWENVTFLKRFFRADE-KYPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlu.1 GEEEYNKFLAKIRS----------------------------------------------
|
| 5ziu.1.A | RdRp
Crystal structure of human Entervirus D68 RdRp | 0.12 | | 15.05 | 0.34 | 496-884 | X-ray | 2.15 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5ziu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5ziu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5ziu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5ziu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5ziu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5ziu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NRA 5ziu.1 ---------------LDLTTSAGFPYLLQGKKKRDIFN-RQTRDTTEMTRMLEKYGVDLPFVTFVKDELRSREKVEKGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 5ziu.1 RLIEASSLNDSVAMRVAFGNLYATFHNNPGTATGSAVGCDPD-VFWSKIPILL-----NGEIFAFDYTGYDASLSPVWFA
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 5ziu.1 CLKKVLIKLG---YT--H-QTSFIDYL---CHSVHLYKDRKYIVNGGMPSGSSGTSIFNTMINNIIIRTLLIRVYKGI--
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 5ziu.1 -----------------------D-------------LDQFKMIAYGDDVIASYPHKI-------DPGLLAEAGKHYGLI
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 5ziu.1 MTPADKGTSFVDTNWENVTFLKRYFRADD-QYPFLIHPVMPMKEIHESIRWTKDPRNTQ-----DHVRSLCYLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5ziu.1 GEEAYNEFCRKI------------------------------------------------
|
| 4nlr.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290S Loop Mutant | 0.12 | | 16.30 | 0.34 | 496-885 | X-ray | 2.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlr.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlr.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlr.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlr.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlr.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlr.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4nlr.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4nlr.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLM-----EEKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4nlr.1 ALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGSSGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4nlr.1 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKD-YGL
target FMSE-AKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4nlr.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlr.1 NGEEEYNKFLAKIR-----------------------------------------------
|
| 1xr7.1.A | Genome polyprotein
Crystal structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 16 | 0.12 | | 16.61 | 0.34 | 496-886 | X-ray | 2.30 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1xr7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1xr7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1xr7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1xr7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1xr7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1xr7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK-ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NRA 1xr7.1 ---------------LDLNTSAGYPYVTLGIKKKDLIN-NKTKDISKLKLALDKYGVDLPMITFLKDELRKKDKIAAGKT
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 1xr7.1 RVIEASSINDTILFRTVYGNLFSKFHLNPGVVTGCAVGCDPE-TFWSKIPLML----DGDCIMAFDYTNYDGSIHPIWFK
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 1xr7.1 ALGMVLDNLS----F-NP---TLINRL---CNSKHIFKSTYYEVEGGVPSGCSGTSIFNSMINNIIIRTLVLDA------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 1xr7.1 -------------------YKH--ID-----------LDKLKIIAYGDDVIFSYKYK-------LDMEAIAKEGQKYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 1xr7.1 ITPADKSSEFKELDYGNVTFLKRGFRQD--DKYKFLIHPTFPVEEIYESIRWTKKPSQM-----QEHVLSLCHLMW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1xr7.1 NGPEIYKDFETKIRS----------------------------------------------
|
| 5f8g.1.A | Genome polyprotein
Enterovirus 71 Polymerase Elongation Complex (C1S1 Form) | 0.11 | | 17.41 | 0.34 | 496-884 | X-ray | 2.78 | monomer | 1 x ZN | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5f8g.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5f8g.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5f8g.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5f8g.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5f8g.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5f8g.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWG--KARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 5f8g.1 ---------------IDLHTSAGYPYSALGIKKRDILDS--TTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 5f8g.1 SRLIEASSLNDSVYLRMTFGHLYETFHANPGTVTGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 5f8g.1 RALELVLRE----IG-YSEEAVSLVEGINH---THHVYRNKTYCVLGGMPSGCSGTSIFNSMINNIIIRALLIKTFKG--
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 5f8g.1 -------------------------I--D---------LDELNMVAYGDDVLASYPFPI-------DCLELARTGKEYGL
target VFMSEAK--CWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 5f8g.1 TMTPADKSPCFNE--VNWDNATFLKRGFLPD--EQFPFLIHPTMPMKEIHESIRWTKDARNT-----QDHVRSLCLLAW-
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5f8g.1 --HNGKQEYEKFVSAI------------------------------------------------
|
| 4nlp.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290V Loop Mutant | 0.12 | | 16.61 | 0.34 | 496-886 | X-ray | 2.20 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlp.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlp.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlp.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlp.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlp.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlp.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NR 4nlp.1 ---------------LDLSTSAGYPYVAMGKKKRDILN--KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4nlp.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4nlp.1 EALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGVSGTSIFNSMINNLIIRTLLLKTYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4nlp.1 ------------------------GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKD-YG
target VFMSE-AKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4nlp.1 LTMTPADKSATFETVTWENVTFLKRFFRADEKY-PFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlp.1 HNGEEEYNKFLAKIRS----------------------------------------------
|
| 4nlo.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290I Loop Mutant | 0.12 | | 16.30 | 0.34 | 496-886 | X-ray | 2.20 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlo.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlo.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlo.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlo.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlo.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlo.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4nlo.1 ---------------LDLSTSAGYPYVAMGKKKRDILNK--QTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4nlo.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4nlo.1 EALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGISGTSIFNSMINNLIIRTLLLKTYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4nlo.1 ------------------------GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKD-YG
target VFMSE-AKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4nlo.1 LTMTPADKSATFETVTWENVTFLKRFFRADEKY-PFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlo.1 HNGEEEYNKFLAKIRS----------------------------------------------
|
| 4nlw.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A/C290I Loop Mutant | 0.12 | | 15.63 | 0.34 | 496-886 | X-ray | 2.10 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4nlw.1 ---------------LDLSTSAGYPYVAMGKKKRDIL-N-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4nlw.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4nlw.1 EALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSAISGTSIFNSMINNLIIRTLLLKTYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4nlw.1 ------------------------GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKDYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4nlw.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlw.1 NGEEEYNKFLAKIRS----------------------------------------------
|
| 2ijd.1.A | Picornain 3C, RNA-directed RNA polymerase
Crystal Structure of the Poliovirus Precursor Protein 3CD | 0.12 | | 15.63 | 0.34 | 496-886 | X-ray | 3.40 | homo-dimer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2ijd.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2ijd.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2ijd.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2ijd.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2ijd.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2ijd.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 2ijd.1 ---------------LDLSTSAGYPYVAMGKKKRDIL-N-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 2ijd.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 2ijd.1 EALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 2ijd.1 ----------------------G--ID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKDYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 2ijd.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRN-----TQDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2ijd.1 NGEEEYNKFLAKIRS----------------------------------------------
|
| 2ijd.2.A | Picornain 3C, RNA-directed RNA polymerase
Crystal Structure of the Poliovirus Precursor Protein 3CD | 0.12 | | 15.63 | 0.34 | 496-886 | X-ray | 3.40 | homo-dimer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2ijd.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2ijd.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2ijd.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2ijd.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2ijd.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2ijd.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 2ijd.2 ---------------LDLSTSAGYPYVAMGKKKRDIL-N-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 2ijd.2 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 2ijd.2 EALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYK---
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 2ijd.2 ----------------------G--ID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKDYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 2ijd.2 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRN-----TQDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2ijd.2 NGEEEYNKFLAKIRS----------------------------------------------
|
| 4nlq.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - C290F Loop Mutant | 0.12 | | 16.67 | 0.34 | 496-885 | X-ray | 2.30 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NR 4nlq.1 ---------------LDLSTSAGYPYVAMGKKKRDILNK--QTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4nlq.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4nlq.1 EALKMVLEKIG-----FGDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGFSGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4nlq.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKD-YG
target VFMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4nlq.1 LTMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlq.1 HNGEEEYNKFLAKIR-----------------------------------------------
|
| 3nma.1.A | 3D polymerase
Mutant P169S of Foot-and-mouth disease Virus RNA dependent RNA-polymerase | 0.11 | | 15.53 | 0.35 | 496-884 | X-ray | 2.60 | monomer | 1 x MG, 1 x G-G-C, 1 x C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3nma.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3nma.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3nma.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3nma.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3nma.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3nma.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 3nma.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRSMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 3nma.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target L-RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3nma.1 AMNIMFEEVF-RTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3nma.1 -------------G------------VE---------L----DTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 3nma.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRGT---I---QEKLISVAGLA
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3nma.1 VH---SGPDEYRRLFEPF------------------------------------------------
|
| 6lsg.1.A | Genome polyprotein
Crystal structure of the enterovirus 71 polymerase elongation complex (C0S6M form) | 0.12 | | 16.35 | 0.34 | 496-884 | X-ray | 2.14 | monomer | 1 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6lsg.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6lsg.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6lsg.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6lsg.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6lsg.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6lsg.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWG--KARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 6lsg.1 ---------------IDLHSTAGYPYSALGIKKRDILDS--TTRDVSKMKFYMDKYGLDLPYSTYVKDELRSIDKIKKGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATRG--ATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 6lsg.1 SRLIEASSLNDSVYLRMTFGHLYETFHANPGTVTGSAVGCNPDT-FWSKLPILLP-----GSLFAFDYSGYDASLSPVWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 6lsg.1 RALELVLREI-----GYSEEAVSLVEGI---NHTHHVYRNKTYCVLGGMPSGMSGTSIFNSMINNIIIRALLIKTFKG--
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 6lsg.1 -----------------------ID-------------LDELNMVAYGDDVLASYPFPI-------DCLELARTGKEYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 6lsg.1 TMTPADKSPCFNEVNWDNATFLKRGFLPD--EQFPFLIHPTMPMKEIHESIRWTKDARNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6lsg.1 HNGKQEYEKFVSAI------------------------------------------------
|
| 8c2p.1.A | RNA-directed RNA polymerase 3D-POL
FMDV 3D polymerase in complex with 3B3 | 0.11 | | 14.55 | 0.35 | 496-884 | X-ray | 1.85 | hetero-1-1-mer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8c2p.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8c2p.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8c2p.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8c2p.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8c2p.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8c2p.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 8c2p.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 8c2p.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 8c2p.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHY-E
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 8c2p.1 ----G--------------------VEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 8c2p.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8c2p.1 H---SGPDEYRRLFEPF------------------------------------------------
|
| 3kna.1.A | 3D polymerase
M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA | 0.11 | | 14.55 | 0.35 | 496-884 | X-ray | 2.80 | monomer | 1 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3kna.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3kna.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3kna.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3kna.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3kna.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3kna.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAKN---- 3kna.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target -RARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 3kna.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 3kna.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGIPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 3kna.1 ------------------------GVEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 3kna.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3kna.1 H---SGPDEYRRLFEPF------------------------------------------------
|
| 3koa.1.A | 3D polymerase
M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA and GTP | 0.11 | | 14.55 | 0.35 | 496-884 | X-ray | 2.40 | monomer | 2 x MG, 1 x DPO, 1 x A-U-G-G-G-C, 1 x C-C-C-G | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3koa.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3koa.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3koa.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3koa.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3koa.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3koa.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAKN---- 3koa.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target -RARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 3koa.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 3koa.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGIPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 3koa.1 ------------------------GVEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 3koa.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3koa.1 H---SGPDEYRRLFEPF------------------------------------------------
|
| 4r0e.1.A | RNA-directed RNA polymerase
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Low-Fidelity Mutant 3Dpol H273R | 0.12 | | 16.35 | 0.34 | 496-885 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4r0e.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4r0e.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4r0e.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4r0e.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4r0e.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4r0e.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4r0e.1 ---------------LDLSTSAGYPYVAMGKKKRDIL-N-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4r0e.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4r0e.1 EALKMVLEKIG-----FGDR-VDYIDYL---NHSHRLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4r0e.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YG
target VFMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4r0e.1 LTMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4r0e.1 HNGEEEYNKFLAKIR-----------------------------------------------
|
| 2ijf.1.A | RNA-directed RNA polymerase
Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Fidelity Mutant 3Dpol G64S | 0.12 | | 15.99 | 0.34 | 496-885 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2ijf.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2ijf.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2ijf.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2ijf.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2ijf.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2ijf.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 2ijf.1 ---------------LDLSTSAGYPYVAMGKKKRDILN--KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 2ijf.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 2ijf.1 EALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 2ijf.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKDYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 2ijf.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2ijf.1 NGEEEYNKFLAKIR-----------------------------------------------
|
| 4k4u.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus polymerase elongation complex (r5_form) | 0.12 | | 16.35 | 0.34 | 496-884 | X-ray | 2.85 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4k4u.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4k4u.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4k4u.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4k4u.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4k4u.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4k4u.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4k4u.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4k4u.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4k4u.1 ALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGMSGTSIFNSMINNLIIRTLLLKTY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4k4u.1 --------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YGL
target FMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4k4u.1 TMTPADKSATFETVTWENVTFLKRFFRADE-KYPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4k4u.1 NGEEEYNKFLAKI------------------------------------------------
|
| 4nlx.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - G289A/C290V Loop Mutant | 0.12 | | 15.67 | 0.34 | 496-884 | X-ray | 2.60 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNRA 4nlx.1 ---------------LDLSTSAGYPYVAMGKKKRDILN-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGKS
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 4nlx.1 RLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWFE
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4nlx.1 ALKMVLEKIG----F-GDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSAVSGTSIFNSMINNLIIRTLLLKTYK----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4nlx.1 -----------------------GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKDYGLT
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 4nlx.1 MTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---HN
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlx.1 GEEEYNKFLAKI------------------------------------------------
|
| 2ily.1.A | Poliovirus polymerase
Crystal structure of poliovirus polymerase complexed with ATP and Mg2+ | 0.12 | | 16.72 | 0.34 | 496-884 | X-ray | 2.60 | monomer | 1 x ATP | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2ily.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2ily.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2ily.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2ily.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2ily.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2ily.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NR 2ily.1 ---------------LDLSTSAGYPYVAMGKKKRDIL-N-KQTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 2ily.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 2ily.1 EALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 2ily.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YG
target VFM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 2ily.1 LTMTPADKSATFETVTWENVTFLKRFFRADEKY-PFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2ily.1 HNGEEEYNKFLAKI------------------------------------------------
|
| 3nky.1.A | 3D polymerase
Structure of a mutant P44S of Foot-and-mouth disease Virus RNA-dependent RNA polymerase | 0.11 | | 14.60 | 0.35 | 497-884 | X-ray | 2.28 | monomer | 2 x MG | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3nky.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3nky.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3nky.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3nky.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3nky.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3nky.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 3nky.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 3nky.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 3nky.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 3nky.1 ------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 3nky.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3nky.1 H---SGPDEYRRLFEPF------------------------------------------------
|
| 4k50.2.A | RNA polymerase 3D-POL
Rhinovirus 16 polymerase elongation complex (r1_form) | 0.12 | | 16.40 | 0.34 | 496-885 | X-ray | 2.93 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4k50.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4k50.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4k50.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4k50.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4k50.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4k50.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 4k50.2 ---------------LDLNTSAGYPYVTLGIKKKDLI-N-NKTKDISKLKLALDKYDVDLPMITFLKDELRKKDKIAAGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4k50.2 TRVIEASSINDTILFRTVYGNLFSKFHLNPGVVTGCAVGCDPE-TFWSKIPLML----DGDCIMAFDYTNYDGSIHPIWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4k50.2 KALGMVLDNL----SF-NP---TLINRL---CNSKHIFKSTYYEVEGGVPSGCSGTSIFNSMINNIIIRTLVLDAY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4k50.2 ---------------------KH--ID-----------LDKLKIIAYGDDVIFSYKYK-------LDMEAIAKEGQKYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4k50.2 TITPADKSSEFKELDYGNVTFLKRGFRQD--DKYKFLIHPTFPVEEIYESIRWTKKPSQM-----QEHVLSLCHLMW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4k50.2 HNGPEIYKDFETKIR-----------------------------------------------
|
| 1tp7.1.A | Genome polyprotein
Crystal Structure of the RNA-dependent RNA Polymerase from Human Rhinovirus 16 | 0.12 | | 16.40 | 0.34 | 496-885 | X-ray | 2.40 | monomer | 1 x DMX | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1tp7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1tp7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1tp7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1tp7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1tp7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1tp7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 1tp7.1 ---------------LDLNTSAGYPYVTLGIKKKDLI-N-NKTKDISKLKLALDKYDVDLPMITFLKDELRKKDKIAAGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 1tp7.1 TRVIEASSINDTILFRTVYGNLFSKFHLNPGVVTGCAVGCDPE-TFWSKIPLML----DGDCIMAFDYTNYDGSIHPIWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 1tp7.1 KALGMVLDNL----SF-NP---TLINRL---CNSKHIFKSTYYEVEGGVPSGCSGTSIFNSMINNIIIRTLVLDAY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 1tp7.1 ---------------------KH--ID-----------LDKLKIIAYGDDVIFSYKYK-------LDMEAIAKEGQKYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 1tp7.1 TITPADKSSEFKELDYGNVTFLKRGFRQD--DKYKFLIHPTFPVEEIYESIRWTKKPSQM-----QEHVLSLCHLMW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1tp7.1 HNGPEIYKDFETKIR-----------------------------------------------
|
| 1tp7.3.A | Genome polyprotein
Crystal Structure of the RNA-dependent RNA Polymerase from Human Rhinovirus 16 | 0.12 | | 16.40 | 0.34 | 496-885 | X-ray | 2.40 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1tp7.3 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1tp7.3 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1tp7.3 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1tp7.3 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1tp7.3 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1tp7.3 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 1tp7.3 ---------------LDLNTSAGYPYVTLGIKKKDLI-N-NKTKDISKLKLALDKYDVDLPMITFLKDELRKKDKIAAGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 1tp7.3 TRVIEASSINDTILFRTVYGNLFSKFHLNPGVVTGCAVGCDPE-TFWSKIPLML----DGDCIMAFDYTNYDGSIHPIWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 1tp7.3 KALGMVLDNL----SF-NP---TLINRL---CNSKHIFKSTYYEVEGGVPSGCSGTSIFNSMINNIIIRTLVLDAY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 1tp7.3 ---------------------KH--ID-----------LDKLKIIAYGDDVIFSYKYK-------LDMEAIAKEGQKYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 1tp7.3 TITPADKSSEFKELDYGNVTFLKRGFRQD--DKYKFLIHPTFPVEEIYESIRWTKKPSQM-----QEHVLSLCHLMW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1tp7.3 HNGPEIYKDFETKIR-----------------------------------------------
|
| 8c1n.1.A | RNA-directed RNA polymerase 3D-POL
FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group | 0.11 | | 14.64 | 0.34 | 496-882 | X-ray | 1.70 | hetero-2-1-mer | 2 x 3PO | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8c1n.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8c1n.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8c1n.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8c1n.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8c1n.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8c1n.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 8c1n.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 8c1n.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 8c1n.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEG
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 8c1n.1 -------------------------VEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 8c1n.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMDY--GTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8c1n.1 H---SGPDEYRRLFE--------------------------------------------------
|
| 8c1n.1.B | RNA-directed RNA polymerase 3D-POL
FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group | 0.11 | | 14.64 | 0.34 | 496-882 | X-ray | 1.70 | hetero-2-1-mer | 2 x 3PO | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8c1n.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8c1n.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8c1n.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8c1n.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8c1n.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8c1n.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 8c1n.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 8c1n.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 8c1n.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEG
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 8c1n.1 -------------------------VEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 8c1n.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMDY--GTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8c1n.1 H---SGPDEYRRLFE--------------------------------------------------
|
| 3kms.1.A | 3D polymerase
G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA trigonal structure | 0.12 | | 15.99 | 0.34 | 496-883 | X-ray | 2.20 | monomer | 1 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3kms.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3kms.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3kms.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3kms.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3kms.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3kms.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 3kms.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVG-PEVEAALKLMEKREYKFACQTFLKDEIRPMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3kms.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target ML-RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 3kms.1 DAMNIMFEEVF-RTE---FGFHPNAEWILKT---LVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 3kms.1 E-------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFK
target YQNNVFMS-EAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAI 3kms.1 S-LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---TI---QEKLISVAG
target DAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3kms.1 LAVH---SGPDEYRRLFEP-------------------------------------------------
|
| 3kmq.1.A | 3D polymerase
G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure | 0.12 | | 15.99 | 0.34 | 496-883 | X-ray | 2.11 | monomer | 1 x G-G-G-C-C, 1 x G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3kmq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3kmq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3kmq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3kmq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3kmq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3kmq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 3kmq.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVG-PEVEAALKLMEKREYKFACQTFLKDEIRPMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3kmq.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target ML-RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 3kmq.1 DAMNIMFEEVF-RTE---FGFHPNAEWILKT---LVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 3kmq.1 E-------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFK
target YQNNVFMS-EAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAI 3kmq.1 S-LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---TI---QEKLISVAG
target DAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3kmq.1 LAVH---SGPDEYRRLFEP-------------------------------------------------
|
| 6s2l.1.A | Genome polyprotein
FMDV 3D polymerase crystallized in presence of (F)uridylylated VPg peptide | 0.11 | | 14.64 | 0.34 | 496-882 | X-ray | 2.30 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6s2l.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6s2l.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6s2l.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6s2l.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6s2l.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6s2l.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 6s2l.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 6s2l.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 6s2l.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEG
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 6s2l.1 -------------------------VE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 6s2l.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMDY--GTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6s2l.1 H---SGPDEYRRLFE--------------------------------------------------
|
| 1tql.1.A | RNA-directed RNA polymerase
POLIOVIRUS POLYMERASE G1A MUTANT | 0.12 | | 16.46 | 0.34 | 496-883 | X-ray | 2.30 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1tql.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1tql.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1tql.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1tql.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1tql.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1tql.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISA-----KNR 1tql.1 ---------------LDLSTSAGYPYVAMGKKKRDILNK--QTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 1tql.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 1tql.1 EALKMVLEKI----GF-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 1tql.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEV-------DASLLAQSGKD-YG
target VFMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 1tql.1 LTMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1tql.1 HNGEEEYNKFLAK-------------------------------------------------
|
| 4nls.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - S288A Loop Mutant | 0.12 | | 16.14 | 0.34 | 496-882 | X-ray | 2.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nls.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nls.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nls.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nls.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nls.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nls.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NR 4nls.1 ---------------LDLSTSAGYPYVAMGKKKRDILNK--QTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4nls.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLM-E----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4nls.1 EALKMVLEKIG----F-GDR-VDYIDYL---NHSHHLYKNKTYCVKGGMPAGCSGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4nls.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKDYGL
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 4nls.1 TMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---H
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nls.1 NGEEEYNKFLA--------------------------------------------------
|
| 1wne.1.A | RNA-dependent RNA polymerase
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA | 0.11 | | 15.72 | 0.34 | 497-882 | X-ray | 3.00 | monomer | 1 x MG, 1 x C-A-U-G-G-G-C-C, 1 x G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1wne.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1wne.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1wne.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1wne.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1wne.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1wne.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK---- 1wne.1 ----------------EPDTAPGLPWALQGKRRGALID-FENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 1wne.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target M-LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 1wne.1 DAMNIMFEEVFRT-E---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 1wne.1 E-------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFK
target YQNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 1wne.1 SLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDY--GTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGL
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1wne.1 AVH---SGPDEYRRLFE--------------------------------------------------
|
| 4x2b.1.A | RNA dependent RNA polymerase
K20A RNA dependent RNA polymerase mutant from Foot-and-Mouth disease Virus complexed with an RNA | 0.11 | | 14.69 | 0.34 | 496-881 | X-ray | 2.94 | monomer | 1 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4x2b.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4x2b.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4x2b.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4x2b.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4x2b.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4x2b.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 4x2b.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 4x2b.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 4x2b.1 AMNIMFEEVFRTE---FGFHPNAEWILKT---LVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 4x2b.1 ------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 4x2b.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4x2b.1 H---SGPDEYRRLF---------------------------------------------------
|
| 5n8x.1.A | 3D polymerase
Trigonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus | 0.12 | | 15.05 | 0.34 | 497-882 | X-ray | 2.40 | monomer | 1 x MN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5n8x.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5n8x.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5n8x.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5n8x.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5n8x.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5n8x.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 5n8x.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVG-PEVEAALKLMEKREYKFACQTFLKDEIRPMEKIR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 5n8x.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 5n8x.1 DAMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 5n8x.1 -----G--------------------VE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 5n8x.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLA
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5n8x.1 VH---SGPDEYRRLFE--------------------------------------------------
|
| 5n95.1.A | 3D polymerase
Tetragonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus | 0.11 | | 15.05 | 0.34 | 497-882 | X-ray | 2.60 | monomer | 1 x 3PO | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5n95.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5n95.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5n95.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5n95.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5n95.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5n95.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 5n95.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVG-PEVEAALKLMEKREYKFACQTFLKDEIRPMEKIR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 5n95.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 5n95.1 DAMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 5n95.1 -----G--------------------VE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 5n95.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLA
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5n95.1 VH---SGPDEYRRLFE--------------------------------------------------
|
| 4wyw.1.A | RNA-directed RNA polymerase 3D-POL
Mutant K20E of 3D polymerase from Foot-and-Mouth Disease Virus | 0.11 | | 14.69 | 0.34 | 497-882 | X-ray | 1.80 | monomer | 1 x 3PO | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wyw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wyw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wyw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wyw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wyw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wyw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 4wyw.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 4wyw.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 4wyw.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 4wyw.1 ------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 4wyw.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wyw.1 H---SGPDEYRRLFE--------------------------------------------------
|
| 3klv.1.A | 3D polymerase
M296I G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA | 0.12 | | 15.36 | 0.34 | 497-882 | X-ray | 2.60 | monomer | 2 x MG, 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3klv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3klv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3klv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3klv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3klv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3klv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY-D----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 3klv.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPE-VEAALKLMEKREYKFACQTFLKDEIRPMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 3klv.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 3klv.1 DAMNIMFEEVFRTE---FGFHPNAEWILKT---LVNTEHAYENKRITVEGGIPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 3klv.1 -------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 3klv.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---TI---QEKLISVAGLA
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3klv.1 VH---SGPDEYRRLFE--------------------------------------------------
|
| 4nlt.1.A | RNA-directed RNA polymerase 3D-POL
Poliovirus Polymerase - S291P Loop Mutant | 0.12 | | 16.88 | 0.34 | 496-881 | X-ray | 2.50 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nlt.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nlt.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nlt.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nlt.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nlt.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nlt.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK--ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NR 4nlt.1 ---------------LDLSTSAGYPYVAMGKKKRDILNK--QTRDTKEMQKLLDTYGINLPLVTYVKDELRSKTKVEQGK
target ARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR 4nlt.1 SRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPD-LFWSKIPVLME-----EKLFAFDYTGYDASLSPAWF
target IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 4nlt.1 EALKMVLEKIG-----FGDR-VDYIDY---LNHSHHLYKNKTYCVKGGMPSGCPGTSIFNSMINNLIIRTLLLKTY----
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 4nlt.1 ---------------------K--GID-----------LDHLKMIAYGDDVIASYPHEVD-------ASLLAQSGKD-YG
target VFM-SEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4nlt.1 LTMTPADKSATFETVTWENVTFLKRFFRADEK-YPFLIHPVMPMKEIHESIRWTKDPRNT-----QDHVRSLCLLAW---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nlt.1 HNGEEEYNKFL---------------------------------------------------
|
| 4wzq.1.A | RNA dependent-RNA polymerase 3D
Mutant K20E of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with RNA | 0.12 | | 15.05 | 0.34 | 497-882 | X-ray | 2.80 | monomer | 1 x MN, 1 x A-U-G-G-G-C-C-C, 1 x U-G-G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wzq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wzq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wzq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wzq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wzq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wzq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD-----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4wzq.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPE-VEAALKLMEKREYKFACQTFLKDEIRPMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4wzq.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4wzq.1 DAMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4wzq.1 -------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4wzq.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLA
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wzq.1 VH---SGPDEYRRLFE--------------------------------------------------
|
| 5jxs.1.A | RNA dependent RNA polymerase
Mutant GC216/7AA of 3D polymerase from Foot-and-Mouth Disease Virus | 0.11 | | 14.73 | 0.34 | 496-882 | X-ray | 2.80 | monomer | 1 x MG, 1 x A-U-G-G-G-C-C-C, 1 x G-G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5jxs.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5jxs.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5jxs.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5jxs.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5jxs.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5jxs.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARL-YYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 5jxs.1 ---------------MEPDTAPGLPWALQGKRRGALIDFENGTVG-PEVEAALKLMEKREYKFACQTFLKDEIRPMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 5jxs.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVAANP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 5jxs.1 DAMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 5jxs.1 -------------GV------------E-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMS-EAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 5jxs.1 -LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDY--GTGFYKPVMASKTLEAILSFARRG---TI---QEKLISVAGL
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5jxs.1 AVH---SGPDEYRRLFE--------------------------------------------------
|
| 4iqx.1.A | 3D polymerase
Mutant P44S P169S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase | 0.11 | | 15.41 | 0.34 | 497-881 | X-ray | 2.50 | monomer | 1 x A-U-G-G-G-C-C, 1 x G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4iqx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4iqx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4iqx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4iqx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4iqx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4iqx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY-D----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4iqx.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPE-VEAALKLMEKREYKFACQTFLKDEIRSMEKVR
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4iqx.1 AGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCS
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4iqx.1 DAMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGIPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4iqx.1 -------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4iqx.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLA
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4iqx.1 VH---SGPDEYRRLF---------------------------------------------------
|
| 4wzm.1.A | RNA dependent RNA polymerase
Mutant K18E of RNA dependent RNA polymerase from Foot-and-Mouth Disease Virus complexed with RNA | 0.11 | | 14.73 | 0.34 | 497-881 | X-ray | 2.52 | monomer | 1 x MN, 1 x A-U-G-G-G-C-C-C, 1 x U-G-G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wzm.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wzm.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wzm.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wzm.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wzm.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wzm.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 4wzm.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 4wzm.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 4wzm.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 4wzm.1 ------------------------GVEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 4wzm.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRGT------IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wzm.1 H---SGPDEYRRLF---------------------------------------------------
|
| 3nl0.1.A | 3D polymerase
Mutant P44S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase | 0.11 | | 14.73 | 0.34 | 497-881 | X-ray | 2.60 | monomer | 2 x MG, 1 x U-G-G-G-C-C-C, 1 x G-G-G-C-C-C | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3nl0.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3nl0.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3nl0.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3nl0.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3nl0.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3nl0.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 3nl0.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 3nl0.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 3nl0.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGIPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 3nl0.1 ------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 3nl0.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFARRG---T---IQEKLISVAGLAV
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3nl0.1 H---SGPDEYRRLF---------------------------------------------------
|
| 6qwt.1.A | Genome polyprotein
Sicinivirus 3Dpol RNA dependent RNA polymerase | 0.11 | | 15.20 | 0.32 | 496-847 | X-ray | 2.30 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6qwt.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6qwt.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6qwt.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6qwt.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6qwt.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6qwt.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDS-------MSYEDQDALFAYTKRNVIPTITQMNLKYAISA--- 6qwt.1 ---------------IDMNQSAGYPWCLTLNRRSLFDVGEDGLYHPCPELYQEIEACLHN--PDYFYTTFLKDELRGVDK
target --KNRARTVAGVSICSTMTNRQFHQKLLKSIAATR-GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 6qwt.1 VAAAKTRLIEAAPIHAIIAGRMLFGGLFEAMHSQPGMYGSAVGCDPD-YHWTPFYHSFLDY---SEVWALDYSNFDSTIP
target NMLRIMASLVLARKHTTCC-SLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNA 6qwt.1 SVVFKLIGEELAKIIQLPPSIPPDAVQKYVQ---SIYLSKHVFGDQWYIMKGGNPSGCVGTSILNSMVNNISLLSAMLTH
target LLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVL 6qwt.1 ----------------------------PD----F----D---TSAWRILCYGDDVLYATVPSIHP-SF------IADFY
target YYQNNVFMSE-AKCWTET-DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAI 6qwt.1 HSQTNYKVTPADKASTFPETSSIHDVTFLKRHFVPDER-FPTYIHPVISPETYQQSVMWTRGG-----------------
target DAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6qwt.1 --------------------------------------------------------------------
|
| 2f8e.1.A | RNA-dependent RNA polymerase
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein | 0.10 | | 14.73 | 0.31 | 497-846 | X-ray | 2.90 | hetero-oligomer | 1 x MN, 1 x MG, 1 x U5P | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2f8e.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2f8e.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2f8e.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2f8e.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2f8e.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2f8e.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAKN---- 2f8e.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target -RARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 2f8e.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target L-RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 2f8e.1 AMNIMFEEVF-RTEF---GFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 2f8e.1 -------------------------GVEL-------------DTYTMISYGDDIVVASDYD-------LDFEALKPHFKS
target QNNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 2f8e.1 LGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDY--GTGFYKPVMASKTLEAILSFARR--------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2f8e.1 ------------------------------------------------------------------
|
| 1xr6.1.A | Genome polyprotein
Crystal Structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 1B | 0.11 | | 17.01 | 0.31 | 496-848 | X-ray | 2.50 | monomer | 1 x K | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1xr6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1xr6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1xr6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1xr6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1xr6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1xr6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGK-ARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK-----NRA 1xr6.1 ---------------LDLNTSAGFPYVTMGIKKRDLIN-NKTKDISRLKEALDKYGVDLPMITFLKDELRKKEKISAGKT
target RTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRI 1xr6.1 RVIEASSINDTILFRTTFGNLFSKFHLNPGVVTGSAVGCDPE-TFWSKIPVML----DGDCIMAFDYTNYDGSIHPVWFQ
target MASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 1xr6.1 ALKKVLENL----SFQS----NLI---DRLCYSKHLFKSTYYEVAGGVPSGCSGTSIFNTMINNIIIRTLVLDAY-----
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 1xr6.1 --------------------KN--ID-----------LDKLKIIAYGDDVIFSYKYT-------LDMEAIANEGK-KYGL
target FMS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDDYV-YLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 1xr6.1 TITPADKSTEFKKLDYNNVTFLKRGFKQD--EKHTFLIHPTFPVEEIYESIRWTKKPS----------------------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1xr6.1 --------------------------------------------------------------
|
| 4wyl.1.A | RNA-directed RNA polymerase 3D-POL
Mutant K18E of 3D polymerase from Foot-and-Moth Disease Virus | 0.09 | | 13.70 | 0.31 | 497-845 | X-ray | 2.00 | monomer | 1 x MN | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wyl.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wyl.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wyl.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wyl.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wyl.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wyl.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 4wyl.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 4wyl.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPD-VDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 4wyl.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 4wyl.1 ------------------------GVE---------L----DTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 4wyl.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFAR----------------------
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wyl.1 -----------------------------------------------------------------
|
| 6gvy.1.A | Genome polyprotein
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA | 0.10 | | 13.70 | 0.31 | 497-845 | X-ray | 2.20 | monomer | 1 x C-C-G-G-G, 1 x U-C-C-C-G-G-G | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6gvy.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6gvy.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6gvy.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6gvy.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6gvy.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6gvy.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 6gvy.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 6gvy.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 6gvy.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 6gvy.1 ------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 6gvy.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFAR----------------------
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6gvy.1 -----------------------------------------------------------------
|
| 6gvv.1.A | RNA polymerase 3D
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus | 0.09 | | 13.70 | 0.31 | 497-845 | X-ray | 2.35 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6gvv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6gvv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6gvv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6gvv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6gvv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6gvv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSY----EDQDALFAYTKRNVIPTITQMNLKYAISAK----- 6gvv.1 ----------------EPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRA
target NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNM 6gvv.1 GKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVDWQRFGTHFAQY---RNVWDVDYSAFDANHCSD
target LRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 6gvv.1 AMNIMFEEVFRTE---FGFHPNAEWILKTL---VNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYE-
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ 6gvv.1 ------------------------GVE-------------LDTYTMISYGDDIVVASDYD-------LDFEALKPHFKSL
target NNVFMSEAKCWTE--TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 6gvv.1 GQTITPADKSDKGFVLGHSITDVTFLKRHFHMD--YGTGFYKPVMASKTLEAILSFAR----------------------
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6gvv.1 -----------------------------------------------------------------
|
| 4y3c.1.A | 3D polymerase
I304V 3D polymerase mutant of EMCV | 0.09 | | 14.43 | 0.31 | 497-847 | X-ray | 3.20 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y3c.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y3c.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y3c.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y3c.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y3c.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y3c.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4y3c.1 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4y3c.1 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4y3c.1 AMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTVMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4y3c.1 ------------------------KN--F--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4y3c.1 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y3c.1 ------------------------------------------------------------------
|
| 4y3c.2.A | 3D polymerase
I304V 3D polymerase mutant of EMCV | 0.09 | | 14.43 | 0.31 | 497-847 | X-ray | 3.20 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y3c.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y3c.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y3c.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y3c.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y3c.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y3c.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4y3c.2 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4y3c.2 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4y3c.2 AMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTVMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4y3c.2 ------------------------KN--F--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4y3c.2 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y3c.2 ------------------------------------------------------------------
|
| 4y3c.3.A | 3D polymerase
I304V 3D polymerase mutant of EMCV | 0.09 | | 14.43 | 0.31 | 497-847 | X-ray | 3.20 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y3c.3 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y3c.3 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y3c.3 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y3c.3 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y3c.3 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y3c.3 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4y3c.3 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4y3c.3 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4y3c.3 AMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTVMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4y3c.3 ------------------------KN--F--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4y3c.3 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y3c.3 ------------------------------------------------------------------
|
| 4y3c.5.A | 3D polymerase
I304V 3D polymerase mutant of EMCV | 0.09 | | 14.43 | 0.31 | 497-847 | X-ray | 3.20 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y3c.5 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y3c.5 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y3c.5 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y3c.5 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y3c.5 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y3c.5 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4y3c.5 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4y3c.5 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4y3c.5 AMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTVMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4y3c.5 ------------------------KN--F--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4y3c.5 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y3c.5 ------------------------------------------------------------------
|
| 4y3c.6.A | 3D polymerase
I304V 3D polymerase mutant of EMCV | 0.09 | | 14.43 | 0.31 | 497-847 | X-ray | 3.20 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y3c.6 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y3c.6 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y3c.6 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y3c.6 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y3c.6 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y3c.6 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKA-RLYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4y3c.6 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4y3c.6 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4y3c.6 AMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTVMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4y3c.6 ------------------------KN--F--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4y3c.6 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y3c.6 ------------------------------------------------------------------
|
| 4nyz.1.A | Genome polyprotein
The EMCV 3Dpol structure with altered motif A conformation at 2.15A resolution | 0.09 | | 14.09 | 0.31 | 497-847 | X-ray | 2.15 | monomer | 1 x GLN, 1 x MG | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nyz.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nyz.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nyz.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nyz.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nyz.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nyz.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4nyz.1 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4nyz.1 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQGF---ERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4nyz.1 AVFRLLAEEFFSEE---NGFDPLVKDYLE---SLAISKHAYEEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4nyz.1 ------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4nyz.1 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nyz.1 ------------------------------------------------------------------
|
| 4y2c.1.A | Genome polyprotein
M300V 3D polymerase mutant of EMCV | 0.09 | | 14.09 | 0.31 | 497-847 | X-ray | 2.20 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4y2c.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4y2c.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4y2c.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4y2c.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4y2c.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4y2c.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAK---- 4y2c.1 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERLEKMNNKDFSDIVYQTFLKDELRPIEKVQ
target -NRARTVAGVSICSTMTNRQFHQKLLKSIAAT--RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN 4y2c.1 AAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHSV
target MLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALL 4y2c.1 AMFRLLAEEFFSE---ENGFDPLVKDYLESL---AISKHAYEEKRYLITGGLPSGCAATSVLNTIMNNIIIRAGLYLTY-
target STDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYY 4y2c.1 ------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLAK
target QNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDA 4y2c.1 TGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRPG-------------------
target YPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4y2c.1 ------------------------------------------------------------------
|
| 4nz0.1.A | Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution | 0.10 | | 14.19 | 0.31 | 497-846 | X-ray | 2.80 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nz0.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nz0.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nz0.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nz0.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nz0.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nz0.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNV-IPTITQMNLKYAISAK--- 4nz0.1 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERL-EKMNNKDFSDIVYQTFLKDELRPIEKV
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 4nz0.1 QAAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHS
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 4nz0.1 VAMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 4nz0.1 -------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLA
target YQNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 4nz0.1 KTGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRP-------------------
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nz0.1 -------------------------------------------------------------------
|
| 4nz0.2.A | Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution | 0.09 | | 14.19 | 0.31 | 497-846 | X-ray | 2.80 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nz0.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nz0.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nz0.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nz0.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nz0.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nz0.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNV-IPTITQMNLKYAISAK--- 4nz0.2 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERL-EKMNNKDFSDIVYQTFLKDELRPIEKV
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 4nz0.2 QAAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHS
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 4nz0.2 VAMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 4nz0.2 -------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLA
target YQNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 4nz0.2 KTGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRP-------------------
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nz0.2 -------------------------------------------------------------------
|
| 4nz0.3.A | Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution | 0.09 | | 14.19 | 0.31 | 497-846 | X-ray | 2.80 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nz0.3 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nz0.3 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nz0.3 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nz0.3 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nz0.3 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nz0.3 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNV-IPTITQMNLKYAISAK--- 4nz0.3 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERL-EKMNNKDFSDIVYQTFLKDELRPIEKV
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 4nz0.3 QAAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHS
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 4nz0.3 VAMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 4nz0.3 -------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLA
target YQNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 4nz0.3 KTGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRP-------------------
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nz0.3 -------------------------------------------------------------------
|
| 4nz0.5.A | Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution | 0.10 | | 14.19 | 0.31 | 497-846 | X-ray | 2.80 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nz0.5 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nz0.5 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nz0.5 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nz0.5 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nz0.5 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nz0.5 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNV-IPTITQMNLKYAISAK--- 4nz0.5 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERL-EKMNNKDFSDIVYQTFLKDELRPIEKV
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 4nz0.5 QAAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHS
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 4nz0.5 VAMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 4nz0.5 -------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLA
target YQNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 4nz0.5 KTGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRP-------------------
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nz0.5 -------------------------------------------------------------------
|
| 4nz0.6.A | Genome polyprotein
The EMCV 3Dpol structure at 2.8A resolution | 0.09 | | 14.19 | 0.31 | 497-846 | X-ray | 2.80 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nz0.6 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nz0.6 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nz0.6 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nz0.6 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nz0.6 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nz0.6 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR-LYYD----SMSYEDQDALFAYTKRNV-IPTITQMNLKYAISAK--- 4nz0.6 ----------------DKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAERL-EKMNNKDFSDIVYQTFLKDELRPIEKV
target --NRARTVAGVSICSTMTNRQFHQKLLKSIAATR--GATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMP 4nz0.6 QAAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDP-DVHWTAFGVAMQG---FERVYDVDYSNFDSTHS
target NMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 4nz0.6 VAMFRLLAEEFFSEE---NGFDPLVKDYLES---LAISKHAYEEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTY
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 4nz0.6 -------------------------K--NF--E----F-----DDVKVLSYGDDLLVATNYQ-------LNFDRVRTSLA
target YQNNVFMSEAKC--WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAID 4nz0.6 KTGYKITPANKTSTFPLE-STLEDVVFLKRKFKKE---G-PLYRPVMNREALEAMLSYYRP-------------------
target AYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nz0.6 -------------------------------------------------------------------
|
| 1s48.1.A | RNA-dependent RNA polymerase
Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV | 0.08 | | 14.89 | 0.30 | 552-890 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1s48.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1s48.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1s48.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1s48.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1s48.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1s48.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1s48.1 -----------------------------------------------------------------------KRPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 1s48.1 EAKTRLAITKVMYNWVKQ-----QPVVIPGYEGKTPLFNIFDK-VRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEI
target LARKHTTCCSLSHRFYRLANECAQVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 1s48.1 QKYY----YK--KEWHKFIDTITDHMTEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCEST------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNNVF 1s48.1 PYK---S--------------------------FNRVARIHVCGDDGFLITEKGLGL--KFANKGMQILHEAGKPQK---
target MS-EAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTK 1s48.1 ITEGEKMKVAY--RFEDIEFCSHTPVPVRWSDNTSSHMAGRDTAVILSKMATRLDSSGERGTTAYEKAV---AFSFLLMY
target HPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1s48.1 SWNPLVRRICLLVLSQQPE------------------------------------------
|
| 6ae4.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-694, Y471A mutant) | 0.07 | | 13.83 | 0.30 | 552-888 | X-ray | 2.95 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6ae4.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6ae4.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6ae4.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6ae4.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6ae4.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6ae4.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6ae4.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 6ae4.1 EAKTRLAITKVM----YKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 6ae4.1 QKYY----FK--KKWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVA-SIKNFKSVLYYQNNVFM 6ae4.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGEK-FASKGVQILAEAGKPQKITEG
target SEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHP 6ae4.1 DKMK-VAY---QFDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLDSSG--ERGTI-AYEKAVAFSFLLMYSW
target NQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6ae4.1 NPLIRRICLLVLSTE--------------------------------------------
|
| 5yf5.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-694) | 0.07 | | 15.41 | 0.30 | 552-888 | X-ray | 2.49 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5yf5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5yf5.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5yf5.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5yf5.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5yf5.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5yf5.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5yf5.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 5yf5.1 EAKTRLAITKVM----YKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 5yf5.1 QKYY----FK--KKWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNNVF 5yf5.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE--KFASKGVQILYEAGKPQ---K
target MSE-AK-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5yf5.1 ITEGDKMKVAY-Q--FDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLDSSGERGTIA---YEKAVAFSFLLM
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5yf5.1 YSWNPLIRRICLLVLSTE--------------------------------------------
|
| 5y6r.1.A | Genome polyprotein
Crystal structure of CSFV NS5B | 0.08 | | 13.88 | 0.30 | 552-888 | X-ray | 3.01 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5y6r.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5y6r.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5y6r.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5y6r.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5y6r.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5y6r.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5y6r.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKF---YGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 5y6r.1 EAKTRLAITKVM----YKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQVL--SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 5y6r.1 QKYY----FKK--KWHKFIDTLTMHMSEVPVISADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMIYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNNVF 5y6r.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE--KFASKGVQILYEAGKPQKITE
target MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 5y6r.1 GDKMK-VAY---QFDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLDSSG--ERGT-IAYEKAVAFSFLLMYS
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5y6r.1 WNPLIRRICLLVLSTE--------------------------------------------
|
| 7ekj.1.A | Classical swine fever virus NS5B
Crystals structure of classical swine fever virus NS5B (residues 91-694) | 0.09 | | 15.05 | 0.30 | 552-888 | X-ray | 3.06 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ekj.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ekj.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ekj.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ekj.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ekj.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ekj.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ekj.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 7ekj.1 EAKTRLAITKVMY----KWVKQ-KPVVIPGYEGKTPLFQIFDKV-KKEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQV--LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 7ekj.1 QKYY----FK--KKWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNNVF 7ekj.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE--KFASKGVQILYEAGKPQK---
target MSE-AKC-WTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 7ekj.1 ITEGDKMKVAY-Q--FDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLDSSG--ERG-TIAYEKAVAFSFLLM
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ekj.1 YSWNPLIRRICLLVLSTE--------------------------------------------
|
| 5yf6.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-682) | 0.08 | | 14.70 | 0.30 | 552-888 | X-ray | 2.10 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5yf6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5yf6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5yf6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5yf6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5yf6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5yf6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5yf6.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 5yf6.1 EAKTRLAITKVMY----KWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 5yf6.1 QKYY----FK--KKWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNNVF 5yf6.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE--KFASKGVQILYEAGKPQ---K
target MSE-AKC-WTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5yf6.1 ITEGDKMKVAY-Q--FDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLDSSG--ERGT-IAYEKAVAFSFLLM
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5yf6.1 YSWNPLIRRICLLVLSTE--------------------------------------------
|
| 6gp9.1.A | RNA-directed RNA polymerase
Structural studies of hepatitis C virus non-structural protein-5b of genotype 4a | 0.08 | | 15.38 | 0.28 | 553-871 | X-ray | 3.10 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6gp9.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6gp9.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6gp9.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6gp9.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6gp9.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6gp9.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6gp9.1 ------------------------------------------------------------------------PARLIVYP
target SICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 6gp9.1 DLGVRVCEKRALHDVIKKLPEAVMGAAYGFQYSPA-QRVEF-LLTAWKSKKTPMGFSYDTRCFDSTVTEKDIRVEEEVYQ
target RKHTTCCSLSHRFYRLANEC-AQVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA 6gp9.1 C----CDL-EPEARKVITALTDRLYVGGPMHNSKGDLCGYRRCRASGVYTTSFGNTLTCYLKATAAI-------------
target DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSE 6gp9.1 ----RA------------AGL-------------RDCTMLVCGDDLVVIAESDGVEE-DNRALRAFTEAMTRYSAPPGDA
target AKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQ 6gp9.1 PQ-PAY---DLELITSCSSNVSVAHDVTGKKVYYLTRDPETPLARAAWETV--RHTP---VNSWLGNIIVYAPTIW----
target EYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6gp9.1 ---------------------------------------------------------
|
| 4adp.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-J6 NS5B POLYMERASE V405I MUTANT | 0.07 | | 13.03 | 0.28 | 554-874 | X-ray | 1.90 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4adp.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4adp.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4adp.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4adp.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4adp.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4adp.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4adp.1 -------------------------------------------------------------------------ARLIVYP
target SICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 4adp.1 DLGVRVCEKMALYDITQKLPQAVMGASYGFQYSPA-QRVEFLL-KAWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYR
target RKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA 4adp.1 A----CSL-PEEAHTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC-------------
target DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV-FMS 4adp.1 --------KA--------AGI-------------IAPTMLVCGDDLVVISESQGTEE-DERNLRAFTEAMTRYSAPPGDP
target EAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 4adp.1 PRPE-----YDLELITSCSSNVSVALGPQGRRRYYLTRDPTTPIARAAWETVRH-----SPINSWLGNIIQYAPTIWARM
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4adp.1 ----------------------------------------------------------
|
| 2xwh.1.A | RNA DEPENDENT RNA POLYMERASE
HCV-J6 NS5B POLYMERASE STRUCTURE AT 1.8 ANGSTROM | 0.07 | | 12.40 | 0.28 | 554-870 | X-ray | 1.80 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xwh.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xwh.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xwh.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xwh.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xwh.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xwh.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xwh.1 -------------------------------------------------------------------------ARLIVYP
target SICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 2xwh.1 DLGVRVCEKMALYDITQKLPQAVMGASYGFQYSPA-QRVEFL-LKAWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYR
target RKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA 2xwh.1 A----CSL-PEEAHTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC-------------
target DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSE 2xwh.1 --------KA--------AGI-------------IAPTMLVCGDDLVVISESQGTEE-DERNLRAFTEAMTRYSAPPGDP
target AKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQ 2xwh.1 PRP-EY---DLELITSCSSNVSVALGPQGRRRYYLTRDPTTPIARAAWETVRH--S---PVNSWLGNIIQYAPTI-----
target EYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xwh.1 ---------------------------------------------------------
|
| 6mvp.1.A | Genome polyprotein
HCV NS5B 1b N316 bound to Compound 18 | 0.07 | | 17.06 | 0.27 | 552-868 | X-ray | 2.00 | monomer | 1 x K4S | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6mvp.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6mvp.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6mvp.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6mvp.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6mvp.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6mvp.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6mvp.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 6mvp.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 6mvp.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-A----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 6mvp.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGVQ-EDAASLRVFTEAMTRY-
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 6mvp.1 --SAP-PGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP-
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6mvp.1 ---------------------------------------------------------------
|
| 2fvc.1.A | polyprotein
Crystal structure of NS5B BK strain (delta 24) in complex with a 3-(1,1-Dioxo-2H-(1,2,4)-benzothiadiazin-3-yl)-4-hydroxy-2(1H)-quinolinone | 0.07 | | 16.67 | 0.27 | 552-868 | X-ray | 2.00 | monomer | 1 x 888 | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2fvc.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2fvc.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2fvc.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2fvc.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2fvc.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2fvc.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2fvc.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 2fvc.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 2fvc.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 2fvc.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGVQE-DAASLRVFTEAMTRY-
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 2fvc.1 --SAP-PGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP-
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2fvc.1 ---------------------------------------------------------------
|
| 2jc0.1.A | RNA-DEPENDENT RNA-POLYMERASE
CRYSTAL STRUCTURE OF HEPATITIS C VIRUS POLYMERASE IN COMPLEX WITH INHIBITOR SB655264 | 0.07 | | 16.27 | 0.27 | 552-867 | X-ray | 2.20 | monomer | 2 x 699 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2jc0.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2jc0.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2jc0.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2jc0.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2jc0.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2jc0.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2jc0.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-W-----HNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMA 2jc0.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVE
target SLVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTD 2jc0.1 ESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------
target GNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNN 2jc0.1 -----------A------------KL-------------QDCTMLVNGDDLVVICESAGVQE-DAASLRVFTEAMTRY--
target VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 2jc0.1 -SAP-PGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2jc0.1 --------------------------------------------------------------
|
| 4wtk.1.A | RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-AGCC, RNA PRIMER 5'-PGG, MN2+, AND CDP | 0.07 | | 12.94 | 0.27 | 553-868 | X-ray | 2.50 | monomer | 3 x MN, 1 x CDP, 1 x PG6, 1 x B3P, 1 x A-G-C-C, 1 x G-G | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wtk.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wtk.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wtk.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wtk.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wtk.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wtk.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4wtk.1 ------------------------------------------------------------------------PARLIVYP
target SICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 4wtk.1 DLGVRVCEKMALYDITQKLPQAVMGASYGFQYSP-AQRVEYL-LKAWAEKKDPMGFSYDTRHFDSTVTERDIRTEESIYQ
target RKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA 4wtk.1 A----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC-------------
target DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSE 4wtk.1 ----KAA------------GI-------------VAPTMLVCGDDLIVISESQGTE-EDERNLRAFTEAMTRYS---APP
target A-K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHP 4wtk.1 GDPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAP-----
target NQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wtk.1 -----------------------------------------------------------
|
| 6mvk.1.A | HCV Polymerase
HCV NS5B 1b N316 bound to Compound 18 | 0.07 | | 16.67 | 0.27 | 552-868 | X-ray | 2.30 | monomer | 1 x K4J | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6mvk.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6mvk.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6mvk.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6mvk.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6mvk.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6mvk.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6mvk.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 6mvk.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 6mvk.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 6mvk.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGVQ-EDAASLRVFTEAMTRY-
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 6mvk.1 --SAP-PGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP-
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6mvk.1 ---------------------------------------------------------------
|
| 6mvq.1.A | HCV Polymerase
HCV NS5B 1b N316 bound to Compound 31 | 0.07 | | 16.67 | 0.27 | 552-868 | X-ray | 2.14 | monomer | 1 x K4M | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6mvq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6mvq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6mvq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6mvq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6mvq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6mvq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6mvq.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 6mvq.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 6mvq.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 6mvq.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGVQ-EDAASLRVFTEAMTRY-
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 6mvq.1 --SAP-PGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP-
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6mvq.1 ---------------------------------------------------------------
|
| 4aep.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 1.8 ANGSTROM | 0.07 | | 13.33 | 0.27 | 553-868 | X-ray | 1.80 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4aep.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4aep.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4aep.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4aep.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4aep.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4aep.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4aep.1 ------------------------------------------------------------------------PARLIVYP
target SICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 4aep.1 DLGVRVCEKMALYDITQKLPQAVMGASYGFQYSP-AQRVEYL-LKAWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQ
target RKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA 4aep.1 A----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC-------------
target DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSE 4aep.1 ----KAA------------GI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRY---SAPP
target A-K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHP 4aep.1 GDPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH-----SPINSWLGNIIQYAP-----
target NQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4aep.1 -----------------------------------------------------------
|
| 2xxd.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-JFH1 NS5B POLYMERASE STRUCTURE AT 1.9 ANGSTROM | 0.07 | | 13.33 | 0.27 | 553-868 | X-ray | 1.88 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xxd.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xxd.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xxd.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xxd.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xxd.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xxd.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xxd.1 ------------------------------------------------------------------------PARLIVYP
target SICSTMTNRQFHQKLLKSIAAT-RGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 2xxd.1 DLGVRVCEKMALYDITQKLPQAVMGASYGFQYSP-AQRVEYL-LKAWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQ
target RKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA 2xxd.1 A----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC-------------
target DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSE 2xxd.1 --------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRY---SAPP
target A-K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHP 2xxd.1 GDPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAP-----
target NQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xxd.1 -----------------------------------------------------------
|
| 3h5s.1.A | RNA-directed RNA polymerase
Hepatitis C virus polymerase NS5B with saccharin inhibitor | 0.08 | | 16.33 | 0.27 | 552-867 | X-ray | 2.00 | monomer | 1 x H5S | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3h5s.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3h5s.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3h5s.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3h5s.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3h5s.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3h5s.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3h5s.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3h5s.1 DL----GVRVCEKMALYDVVS-TLPQVVMG--SSYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3h5s.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3h5s.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAASLRVFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3h5s.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3h5s.1 ---------------------------------------------------------------
|
| 2hai.1.A | HEPATITIS C VIRUS NS5B RNA POLYMERASE
Crystal structure of HCV NS5B RNA polymerase in complex with novel class of dihydropyrone-containing inhibitor. | 0.07 | | 16.33 | 0.27 | 552-867 | X-ray | 1.58 | monomer | 1 x PFI | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2hai.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2hai.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2hai.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2hai.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2hai.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2hai.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2hai.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 2hai.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 2hai.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 2hai.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 2hai.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2hai.1 ---------------------------------------------------------------
|
| 3frz.1.A | RNA-directed RNA polymerase
Crystal Structure of HCV NS5B RNA polymerase in complex with PF868554 | 0.07 | | 16.33 | 0.27 | 552-867 | X-ray | 1.86 | monomer | 1 x AG0, 1 x AG6 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3frz.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3frz.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3frz.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3frz.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3frz.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3frz.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3frz.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3frz.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3frz.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3frz.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3frz.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3frz.1 ---------------------------------------------------------------
|
| 4kai.1.A | HCV Polymerase
HCV NS5B GT1B N316 with GSK5852A | 0.07 | | 16.33 | 0.27 | 552-867 | X-ray | 2.30 | monomer | 2 x 1PV | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4kai.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4kai.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4kai.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4kai.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4kai.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4kai.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4kai.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4kai.1 DLG----VRVCEKMALYDVVS-TLPQVVMGS--SYGFQYSPGQRVEF-LVNTWKSKKNPMGFSYDTRCFDSTVTENDIRV
target ASLVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4kai.1 EESIYQC----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4kai.1 ------------A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4kai.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4kai.1 ---------------------------------------------------------------
|
| 6mvo.1.A | RNA-directed RNA polymerase
HCV NS5B 1A Y316 bound to Compound 49 | 0.07 | | 15.94 | 0.27 | 552-867 | X-ray | 1.95 | monomer | 1 x K4P | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6mvo.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6mvo.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6mvo.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6mvo.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6mvo.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6mvo.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6mvo.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 6mvo.1 DLG----VRVCEKMALYDVVSKLPLA-VMG--SSYGFQYSPGQRVEF-LVQAWKSKKTPMGFSYDTRCFDSTVTESDIRT
target ASLVLARKHTTCCSLSHRFYRLANECAQVL---SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 6mvo.1 EEAIYQC----CDL-DPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCRASGVLTTSCGNTLTCYIKARAACR------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 6mvo.1 -----------AA------------GL-------------QDCTMLVYGDDLVVICESAGVQE-DAASLRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGD-DYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 6mvo.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMFA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6mvo.1 ---------------------------------------------------------------
|
| 4dru.1.A | RNA-directed RNA polymerase
HCV NS5B in complex with macrocyclic INDOLE INHIBITOR | 0.08 | | 15.60 | 0.27 | 554-868 | X-ray | 2.10 | monomer | 1 x 0LN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4dru.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4dru.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4dru.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4dru.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4dru.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4dru.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4dru.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4dru.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4dru.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4dru.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4dru.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNIIMYAP-
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4dru.1 ---------------------------------------------------------------
|
| 5czb.1.A | NS5B
HCV NS5B IN COMPLEX WITH LIGAND IDX17119-5 | 0.08 | | 15.66 | 0.27 | 554-867 | X-ray | 1.96 | monomer | 1 x 55W, 1 x MES | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5czb.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5czb.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5czb.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5czb.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5czb.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5czb.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5czb.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 5czb.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVE-FLVNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 5czb.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 5czb.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 5czb.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNIIMYA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5czb.1 ---------------------------------------------------------------
|
| 4eaw.1.A | RNA-directed RNA polymerase
HCV NS5B in complex with IDX375 | 0.08 | | 15.26 | 0.27 | 554-867 | X-ray | 2.00 | monomer | 1 x 0NQ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4eaw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4eaw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4eaw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4eaw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4eaw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4eaw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4eaw.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4eaw.1 DL----GVRVCEKMALYDVVSTLPQ-AVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4eaw.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAACR------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4eaw.1 -----------AA------------KL-------------QDCTMLVYGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4eaw.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNIIMYA--
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4eaw.1 ---------------------------------------------------------------
|
| 3qgd.1.A | RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and (2R)-4-(2,6-dimethoxypyrimidin-4-yl)-1-[(4-ethylphenyl)sulfonyl]-N-(4-methoxybenzyl)piperazine-2-carboxamide | 0.07 | | 16.06 | 0.27 | 553-865 | X-ray | 2.60 | monomer | 1 x 23E | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qgd.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qgd.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qgd.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qgd.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qgd.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qgd.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3qgd.1 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 3qgd.1 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVEFLVN-AWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3qgd.1 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACR--------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3qgd.1 ---------AA------------KL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target -FMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 3qgd.1 PGD-PPKP-E-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qgd.1 --------------------------------------------------------------
|
| 3qgg.1.A | RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide | 0.07 | | 16.06 | 0.27 | 553-865 | X-ray | 3.22 | monomer | 1 x 23E, 1 x 63F | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qgg.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qgg.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qgg.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qgg.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qgg.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qgg.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3qgg.1 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 3qgg.1 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVEFLVN-AWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3qgg.1 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACR--------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3qgg.1 ---------AA------------KL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target -FMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 3qgg.1 PGD-PPKP-E-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qgg.1 --------------------------------------------------------------
|
| 3qge.2.A | RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with (2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid and (2R)-4-(2,6-dimethoxypyrimidin-4-yl)-N-(4-methoxybenzyl)-1-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazine-2-carboxamide | 0.07 | | 16.06 | 0.27 | 553-865 | X-ray | 3.00 | monomer | 1 x 23E, 1 x 26F | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qge.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qge.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qge.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qge.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qge.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qge.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3qge.2 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 3qge.2 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVEFLVN-AWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 3qge.2 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACR--------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 3qge.2 ---------AA------------KL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target -FMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 3qge.2 PGD-PPKP-E-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qge.2 --------------------------------------------------------------
|
| 5pzp.2.A | RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 4-FLUORO-2-(4-FLUOROPHENYL)-N-METHYL-5-(2-METHYL-5-{[1-(PYRIMIDIN-2-YL)CYCLOPROPYL]CARBAMOYL}PHENYL)-1-BENZOFURAN-3-CARBOXAMIDE (BMS-929075) | 0.07 | | 16.06 | 0.27 | 553-865 | X-ray | 2.95 | monomer | 1 x 23E, 1 x 8XJ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5pzp.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5pzp.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5pzp.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5pzp.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5pzp.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5pzp.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5pzp.2 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 5pzp.2 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVEFLVN-AWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 5pzp.2 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACR--------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 5pzp.2 ---------AA------------KL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target -FMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5pzp.2 PGD-PPKP-E-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5pzp.2 --------------------------------------------------------------
|
| 4nld.1.A | RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase complex with BMS-791325 also known as (1aR,12bS)-8-cyclohexyl-n-(dimethylsulfamoyl)-11-methoxy-1a-{[(1R,5S)-3-methyl-3,8-diazabicyclo[3.2.1]oct-8-yl]carbonyl}-1,1a,2,12b-tetrahydrocyclopropa[d]indolo[2,1-a][2]benzazepine-5-carboxamide and 2-(4-fluorophenyl)-n-methyl-6-[(methylsulfonyl)amino]-5-(propan-2-yloxy)-1-benzofuran-3-carboxamide | 0.06 | | 16.06 | 0.27 | 553-865 | X-ray | 2.75 | monomer | 1 x 2N7, 1 x 2N5, 2 x BOG | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4nld.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4nld.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4nld.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4nld.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4nld.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4nld.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4nld.1 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 4nld.1 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVEFLVN-AWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 4nld.1 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACR--------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 4nld.1 ---------AA------------KL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target -FMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 4nld.1 PGD-PPKP-E-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4nld.1 --------------------------------------------------------------
|
| 5pzo.1.A | RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE C316N IN COMPLEX WITH 2-(4-FLUOROPHENYL)-N-METHYL-5-[3-({2-METHYL-1-OXO-1-[(1,3,4-THIADIAZOL-2-YL)AMINO]PROPAN-2-YL}CARBAMOYL)PHENYL]-1-BENZOFURAN-3-CARBOXAMIDE | 0.08 | | 16.60 | 0.27 | 554-864 | X-ray | 2.80 | monomer | 1 x 23E, 1 x 8XM | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5pzo.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5pzo.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5pzo.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5pzo.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5pzo.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5pzo.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5pzo.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFYG---GWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 5pzo.1 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVE-FLVNAWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 5pzo.1 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACRA-----A-
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 5pzo.1 -----------------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target F-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5pzo.1 PGD-PPKP-E-YD--LELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA--RHTP---VNSWLGNII------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5pzo.1 --------------------------------------------------------------
|
| 5pzo.2.A | RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE C316N IN COMPLEX WITH 2-(4-FLUOROPHENYL)-N-METHYL-5-[3-({2-METHYL-1-OXO-1-[(1,3,4-THIADIAZOL-2-YL)AMINO]PROPAN-2-YL}CARBAMOYL)PHENYL]-1-BENZOFURAN-3-CARBOXAMIDE | 0.07 | | 16.60 | 0.27 | 554-864 | X-ray | 2.80 | monomer | 1 x 23E, 1 x 8XM | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5pzo.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5pzo.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5pzo.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5pzo.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5pzo.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5pzo.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5pzo.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTS--KFYG---GWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMAS 5pzo.2 D----LGVRVCEKMALYDVVSTLPQA-VMGSSYGFQYSPGQRVE-FLVNAWKAKKCPMGFAYDTRCFDSTVTENDIRVEE
target LVLARKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 5pzo.2 SIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACRA-----A-
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 5pzo.2 -----------------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAP
target F-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5pzo.2 PGD-PPKP-E-YD--LELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA--RHTP---VNSWLGNII------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5pzo.2 --------------------------------------------------------------
|
| 3ske.1.A | HCV NS5B RNA_DEPENDENT RNA POLYMERASE
I. Novel HCV NS5B Polymerase Inhibitors: Discovery of Indole 2- Carboxylic Acids with C3-Heterocycles | 0.08 | | 16.26 | 0.26 | 554-864 | X-ray | 1.97 | monomer | 1 x 054 | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3ske.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3ske.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3ske.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3ske.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3ske.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3ske.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3ske.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3ske.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3ske.1 EESIYQC----CD-LAPEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3ske.1 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3ske.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3ske.1 ---------------------------------------------------------------
|
| 3lkh.2.A | RNA-directed RNA polymerase
Inhibitors of Hepatitis C Virus Polymerase: Synthesis and Characterization of Novel 6-Fluoro-N-[2-Hydroxy-1(S)-Benzamides | 0.08 | | 16.26 | 0.26 | 554-864 | X-ray | 2.05 | monomer | 1 x LT6 | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3lkh.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3lkh.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3lkh.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3lkh.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3lkh.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3lkh.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3lkh.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3lkh.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3lkh.2 EESIYQC----CD-LAPEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3lkh.2 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3lkh.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3lkh.2 ---------------------------------------------------------------
|
| 4mz4.2.A | RNA-directed RNA polymerase
Discovery of an Irreversible HCV NS5B Polymerase Inhibitor | 0.08 | | 16.26 | 0.26 | 554-864 | X-ray | 1.63 | monomer | 1 x 2F3 | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4mz4.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4mz4.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4mz4.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4mz4.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4mz4.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4mz4.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4mz4.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4mz4.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4mz4.2 EESIYQC----CD-LAPEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4mz4.2 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4mz4.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4mz4.2 ---------------------------------------------------------------
|
| 7diy.1.B | nsp14-ExoN protein
Crystal structure of SARS-CoV-2 nsp10 bound to nsp14-exoribonuclease domain | 0.08 | | 17.55 | 0.26 | 83-363 | X-ray | 2.69 | hetero-1-1-mer | 4 x ZN, 1 x MG | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7diy.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEIL--VTYNCCDDDYFN 7diy.1 --AENVTGLFKDCSKVITGL----------HPT--------QAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLI-SMMG
target KKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV-LTLD------NQDLNGNWYDFGDFIQTTPGSGV 7diy.1 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAK
target PVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLF-----DRYFKYWDQTYH----------- 7diy.1 PPPGDQFKHLIPLMY-----------------KGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIG
target PN--CVNCLDD-RCI------LHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRL 7diy.1 PERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRC---
target SFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDG 7diy.1 --------------------------------------------------------------------------------
target NAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDA 7diy.1 --------------------------------------------------------------------------------
target LFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVY 7diy.1 --------------------------------------------------------------------------------
target SDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDAT 7diy.1 --------------------------------------------------------------------------------
target TAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCF 7diy.1 --------------------------------------------------------------------------------
target NSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDD 7diy.1 --------------------------------------------------------------------------------
target IVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYT 7diy.1 --------------------------------------------------------------------------------
target PHTVLQ 7diy.1 ------
|
| 7mc6.1.A | Proofreading exoribonuclease
Crystal structure of the SARS-CoV-2 ExoN-nsp10 complex containing Mg2+ ion | 0.09 | | 17.55 | 0.26 | 83-363 | X-ray | 2.10 | hetero-1-1-mer | 4 x ZN, 1 x MG | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7mc6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEIL--VTYNCCDDDYFN 7mc6.1 --AENVTGLFKDCSKVITGL----------HPT--------QAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLI-SMMG
target KKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV-LTLD------NQDLNGNWYDFGDFIQTTPGSGV 7mc6.1 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAK
target PVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLF-----DRYFKYWDQTYH----------- 7mc6.1 PPPGDQFKHLIPLMY-----------------KGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFQLTSMKYFVKIG
target PN--CVNCLDD-RCI------LHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRL 7mc6.1 PERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRC---
target SFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDG 7mc6.1 --------------------------------------------------------------------------------
target NAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDA 7mc6.1 --------------------------------------------------------------------------------
target LFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVY 7mc6.1 --------------------------------------------------------------------------------
target SDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDAT 7mc6.1 --------------------------------------------------------------------------------
target TAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCF 7mc6.1 --------------------------------------------------------------------------------
target NSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDD 7mc6.1 --------------------------------------------------------------------------------
target IVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYT 7mc6.1 --------------------------------------------------------------------------------
target PHTVLQ 7mc6.1 ------
|
| 4ry4.1.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (Y448F) of HCV/J4 RNA polymerase | 0.08 | | 15.85 | 0.26 | 554-864 | X-ray | 2.59 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry4.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry4.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry4.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry4.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry4.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry4.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry4.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry4.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry4.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry4.1 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4ry4.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry4.1 ---------------------------------------------------------------
|
| 4ry4.2.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (Y448F) of HCV/J4 RNA polymerase | 0.08 | | 15.85 | 0.26 | 554-864 | X-ray | 2.59 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry4.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry4.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry4.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry4.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry4.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry4.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry4.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry4.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry4.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry4.2 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4ry4.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry4.2 ---------------------------------------------------------------
|
| 4ry7.1.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (D559E) of HCV/J4 RNA polymerase | 0.07 | | 16.33 | 0.26 | 554-864 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry7.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry7.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry7.1 EESIYQC----CD-LAPEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry7.1 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTR-Y
target NVF-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 4ry7.1 SAPPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII----
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry7.1 ----------------------------------------------------------------
|
| 4ry7.2.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (D559E) of HCV/J4 RNA polymerase | 0.07 | | 16.33 | 0.26 | 554-864 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry7.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry7.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry7.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry7.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry7.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry7.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry7.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry7.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry7.2 EESIYQC----CD-LAPEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry7.2 ----------RAA------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTR-Y
target NVF-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 4ry7.2 SAPPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII----
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry7.2 ----------------------------------------------------------------
|
| 3u4r.1.A | RNA-directed RNA polymerase
Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides | 0.08 | | 15.45 | 0.26 | 554-864 | X-ray | 2.00 | monomer | 1 x 08F | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3u4r.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3u4r.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3u4r.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3u4r.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3u4r.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3u4r.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3u4r.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3u4r.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3u4r.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3u4r.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3u4r.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3u4r.1 ---------------------------------------------------------------
|
| 4oow.1.A | RNA-directed RNA polymerase
HCV NS5B polymerase with a fragment of quercetagetin | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.57 | monomer | 1 x CAQ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4oow.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4oow.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4oow.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4oow.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4oow.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4oow.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4oow.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4oow.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4oow.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4oow.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4oow.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4oow.1 ---------------------------------------------------------------
|
| 4oow.2.A | RNA-directed RNA polymerase
HCV NS5B polymerase with a fragment of quercetagetin | 0.08 | | 15.45 | 0.26 | 554-864 | X-ray | 2.57 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4oow.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4oow.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4oow.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4oow.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4oow.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4oow.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4oow.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4oow.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4oow.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4oow.2 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4oow.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4oow.2 ---------------------------------------------------------------
|
| 3gnv.1.A | RNA-directed RNA polymerase
HCV NS5B polymerase in complex with 1,5 benzodiazepine inhibitor 1b | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.75 | monomer | 1 x XNZ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3gnv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3gnv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3gnv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3gnv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3gnv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3gnv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3gnv.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3gnv.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3gnv.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3gnv.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3gnv.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3gnv.1 ---------------------------------------------------------------
|
| 3gol.2.A | RNA-directed RNA polymerase
HCV NS5b polymerase in complex with 1,5 benzodiazepine inhibitor (R)-11d | 0.08 | | 15.45 | 0.26 | 554-864 | X-ray | 2.85 | monomer | 1 x XND, 1 x MG | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3gol.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3gol.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3gol.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3gol.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3gol.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3gol.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3gol.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3gol.2 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3gol.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3gol.2 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 3gol.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3gol.2 ---------------------------------------------------------------
|
| 4gmc.1.A | NS5B polymerase
Crystal structure of HCV NS5B polymerase in complex with a thumb inhibitor | 0.08 | | 15.45 | 0.26 | 554-864 | X-ray | 2.70 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4gmc.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4gmc.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4gmc.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4gmc.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4gmc.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4gmc.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4gmc.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4gmc.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4gmc.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4gmc.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4gmc.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4gmc.1 ---------------------------------------------------------------
|
| 4gmc.2.A | NS5B polymerase
Crystal structure of HCV NS5B polymerase in complex with a thumb inhibitor | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.70 | monomer | 1 x 1BI | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4gmc.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4gmc.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4gmc.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4gmc.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4gmc.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4gmc.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4gmc.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4gmc.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4gmc.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4gmc.2 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4gmc.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4gmc.2 ---------------------------------------------------------------
|
| 4j0a.2.A | Genome polyprotein
Crystal structure of hcv ns5b polymerase in complex with 2-{[(4-METHYLPHENYL)SULFONYL]AMINO}-4-PHENOXYBENZOIC ACID | 0.08 | | 15.45 | 0.26 | 554-864 | X-ray | 2.40 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4j0a.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4j0a.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4j0a.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4j0a.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4j0a.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4j0a.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4j0a.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGG-------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4j0a.2 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4j0a.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4j0a.2 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4j0a.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4j0a.2 ---------------------------------------------------------------
|
| 2xhw.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-J4 NS5B POLYMERASE TRIGONAL CRYSTAL FORM | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.66 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xhw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xhw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xhw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xhw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xhw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xhw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xhw.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 2xhw.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 2xhw.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 2xhw.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 2xhw.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xhw.1 ---------------------------------------------------------------
|
| 2xhu.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-J4 NS5B POLYMERASE ORTHORHOMBIC CRYSTAL FORM | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.29 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xhu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xhu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xhu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xhu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xhu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xhu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xhu.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 2xhu.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLVN-TWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 2xhu.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 2xhu.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 2xhu.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xhu.1 ---------------------------------------------------------------
|
| 4ry5.1.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (W550N) of HCV/J4 RNA polymerase | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.71 | monomer | 2 x MN, 1 x UTP | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry5.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry5.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry5.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry5.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry5.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry5.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry5.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry5.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry5.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4ry5.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry5.1 ---------------------------------------------------------------
|
| 4ry5.2.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (W550N) of HCV/J4 RNA polymerase | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.71 | monomer | 2 x MN, 1 x UTP | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry5.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry5.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry5.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry5.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry5.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry5.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry5.2 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry5.2 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry5.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry5.2 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4ry5.2 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry5.2 ---------------------------------------------------------------
|
| 1nb7.1.A | polyprotein
HC-J4 RNA polymerase complexed with short RNA template strand | 0.07 | | 15.45 | 0.26 | 553-864 | X-ray | 2.90 | monomer | 2 x MN, 1 x U-U-U-U | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1nb7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1nb7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1nb7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1nb7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1nb7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1nb7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1nb7.1 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 1nb7.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 1nb7.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 1nb7.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTR-Y
target NVF-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 1nb7.1 SAPPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII----
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1nb7.1 ----------------------------------------------------------------
|
| 1nb7.2.A | polyprotein
HC-J4 RNA polymerase complexed with short RNA template strand | 0.07 | | 15.45 | 0.26 | 553-864 | X-ray | 2.90 | monomer | 2 x MN, 1 x U-U-U-U | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1nb7.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1nb7.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1nb7.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1nb7.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1nb7.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1nb7.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1nb7.2 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 1nb7.2 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 1nb7.2 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 1nb7.2 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTR-Y
target NVF-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 1nb7.2 SAPPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---INSWLGNII----
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1nb7.2 ----------------------------------------------------------------
|
| 4ry6.1.A | HCV J4 RNA polymerase (NS5B)
C-terminal mutant (W550A) of HCV/J4 RNA polymerase | 0.07 | | 15.45 | 0.26 | 554-864 | X-ray | 2.52 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ry6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ry6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ry6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ry6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ry6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ry6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ry6.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4ry6.1 DL----GVRVCEKMALYDVVSTL-PQAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4ry6.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4ry6.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4ry6.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII-----
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ry6.1 ---------------------------------------------------------------
|
| 3upi.1.A | RNA-directed RNA polymerase
Synthesis of novel 4,5-dihydrofurano indoles and their evaluation as HCV NS5B polymerase inhibitors | 0.08 | | 15.45 | 0.26 | 554-865 | X-ray | 2.00 | monomer | 1 x 0C2 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3upi.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3upi.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3upi.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3upi.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3upi.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3upi.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3upi.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 3upi.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFL-VNTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 3upi.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 3upi.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTR-Y
target NVF-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 3upi.1 SAPPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNIIM---
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3upi.1 ----------------------------------------------------------------
|
| 2xhv.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-J4 NS5B POLYMERASE POINT MUTANT ORTHORHOMBIC CRYSTAL FORM | 0.07 | | 15.51 | 0.26 | 554-864 | X-ray | 1.90 | monomer | 1 x MG | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xhv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xhv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xhv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xhv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xhv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xhv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xhv.1 -------------------------------------------------------------------------ARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 2xhv.1 DL----GVRVCEKMALYDVVSTLP-QAVMG--SSYGFQYSPKQRVEFLV-NTWKSKKCPMGFSYDTRCFDSTVTESDIRV
target ASLVLARKHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 2xhv.1 EESIYQC----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKATAAC-------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 2xhv.1 --------------RA--------AKL-------------QDCTMLVNGDDLVVICESAGTQ-EDAAALRAFTEAMTR-Y
target NVF-MSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYP 2xhv.1 SAPPGDPPQ-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARH--TP---INSWLGNII----
target LTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xhv.1 ----------------------------------------------------------------
|
| 7mc5.1.A | Proofreading exoribonuclease
Crystal structure of the SARS-CoV-2 ExoN-nsp10 complex | 0.08 | | 17.28 | 0.26 | 85-363 | X-ray | 1.64 | hetero-1-1-mer | 4 x ZN, 2 x TLA | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7mc5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEIL--VTYNCCDDDYFN 7mc5.1 ----NVTGLFKDCSKVITGL----------HPT--------QAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLI-SMMG
target KKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV-LTLD------NQDLNGNWYDFGDFIQTTPGSGV 7mc5.1 FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAK
target PVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLF-----DRYFKYWDQTYH----------- 7mc5.1 PPPGDQFKHLIPLMY-----------------KGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFQLTSMKYFVKIG
target PN--CVNCLDD-RCI------LHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRL 7mc5.1 PERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRC---
target SFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDG 7mc5.1 --------------------------------------------------------------------------------
target NAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDA 7mc5.1 --------------------------------------------------------------------------------
target LFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVY 7mc5.1 --------------------------------------------------------------------------------
target SDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDAT 7mc5.1 --------------------------------------------------------------------------------
target TAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCF 7mc5.1 --------------------------------------------------------------------------------
target NSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDD 7mc5.1 --------------------------------------------------------------------------------
target IVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYT 7mc5.1 --------------------------------------------------------------------------------
target PHTVLQ 7mc5.1 ------
|
| 7f0s.1.A | RNA-directed RNA polymerase nsP4
A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically 1dynamic RNA-dependent RNA polymerase | 0.06 | | 15.23 | 0.26 | 553-863 | X-ray | 2.60 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7f0s.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7f0s.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7f0s.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7f0s.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7f0s.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7f0s.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7f0s.1 ------------------------------------------------------------------------KVQVIQAA
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7f0s.1 EPLATAYLCGIHRELVRRLKAVLAPNIHTLFDMSAEDFDAIIAAHFQP--GDAVLETDIASFDKSQDDSLALTALMLLED
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7f0s.1 LG-----VDQELLDLIEAAFGEITSVHLPTGTRFKFGAMMKSGMFLTLFVNTLLNIVIACRV-----LREK---------
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW 7f0s.1 --L--------------------------TNSVCAAFIGDDNIVHGVRSDPL-----MAERCAS----WVNM---EVKII
target TETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYAD 7f0s.1 DAT-MCEKPPYFCGGFIL--YDKVTGSA-CRVADPLKRLFKLGKPL---PAGDTQDEDRRRALK----------------
target VFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7f0s.1 -----------------------------------------------------
|
| 5yf7.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672) | 0.07 | | 15.42 | 0.26 | 552-846 | X-ray | 2.27 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5yf7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5yf7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5yf7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5yf7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5yf7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5yf7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5yf7.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 5yf7.1 EAKTRLAITKV----MYKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 5yf7.1 QKY----YFKK--KWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNNVF 5yf7.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE--KFASKGVQILYEAGKPQ---K
target MSE-AKC-WTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5yf7.1 ITEGDKMKVAY---QFDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLD------------------------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5yf7.1 --------------------------------------------------------------
|
| 6ae5.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 1) | 0.07 | | 14.17 | 0.26 | 552-846 | X-ray | 2.75 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6ae5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6ae5.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6ae5.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6ae5.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6ae5.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6ae5.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6ae5.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 6ae5.1 EAKTRLAITKV----MYKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 6ae5.1 QKYY----FKK--KWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS-IKNFKSVLYYQNNVFM 6ae5.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE-KFASKGVQILAEAGKP---QKI
target SE---AKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 6ae5.1 TEGDKMKVAY----QFDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRLD------------------------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6ae5.1 --------------------------------------------------------------
|
| 2cjq.1.A | RNA-DIRECTED RNA POLYMERASE
BOVINE VIRAL DIARRHEA VIRUS CP7-R12 RNA-DEPENDENT RNA POLYMERASE | 0.07 | | 14.52 | 0.26 | 552-847 | X-ray | 2.60 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2cjq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2cjq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2cjq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2cjq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2cjq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2cjq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2cjq.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN---MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 2cjq.1 EAKTRLAITKVMYNWVK----QQ-PVVIPGYE-GKTPLFNIFNKVRKEWDLFNEPVAVSFDTKNWDTQVTSRDLRLIGEI
target LARKHTTCCSL--SHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 2cjq.1 QKY----YYRKEWHKFIDTITDH--MVEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCEST------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQ-----GLVASIKNFKSVLYYQN 2cjq.1 PYK---------------------SF-------NNRVARIHVCGDDGFLITEKGLGLKFANNGMQILHEAGKPQKIT--E
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 2cjq.1 GERMKVAYRF-------EDIEFCSHTPVPVRWSDNTSSYMAGRDTAVILSKMATRLDS----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2cjq.1 ---------------------------------------------------------------
|
| 1s4f.1.A | RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV) | 0.07 | | 14.64 | 0.26 | 552-846 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1s4f.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1s4f.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1s4f.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1s4f.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1s4f.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1s4f.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1s4f.1 -----------------------------------------------------------------------KRPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 1s4f.1 EAKTRLAITKVMYNWVKQ----Q-PVVIPGYEGKTPLFNIFDK-VRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEI
target LARKHTTCCSLSHRFYRLANECAQV--LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 1s4f.1 QKYY----YK--KEWHKFIDTITDHMTEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCEST------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNN-- 1s4f.1 PYK-----------------------------SFNRVARIHVCGDDGFLITEKGLGL--KFANKGMQILHEAGKPQKITE
target -VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 1s4f.1 GEKMKVAYRF-------EDIEFCSHTPVPVRWSDNTSSHMAGRDTAVILSKMATRLD-----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1s4f.1 ---------------------------------------------------------------
|
| 1s4f.2.A | RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV) | 0.07 | | 14.64 | 0.26 | 552-846 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1s4f.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1s4f.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1s4f.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1s4f.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1s4f.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1s4f.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1s4f.2 -----------------------------------------------------------------------KRPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 1s4f.2 EAKTRLAITKVMYNWVKQ----Q-PVVIPGYEGKTPLFNIFDK-VRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEI
target LARKHTTCCSLSHRFYRLANECAQV--LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 1s4f.2 QKYY----YK--KEWHKFIDTITDHMTEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCEST------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNN-- 1s4f.2 PYK-----------------------------SFNRVARIHVCGDDGFLITEKGLGL--KFANKGMQILHEAGKPQKITE
target -VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 1s4f.2 GEKMKVAYRF-------EDIEFCSHTPVPVRWSDNTSSHMAGRDTAVILSKMATRLD-----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1s4f.2 ---------------------------------------------------------------
|
| 1s4f.3.A | RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV) | 0.07 | | 14.64 | 0.26 | 552-846 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1s4f.3 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1s4f.3 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1s4f.3 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1s4f.3 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1s4f.3 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1s4f.3 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1s4f.3 -----------------------------------------------------------------------KRPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 1s4f.3 EAKTRLAITKVMYNWVKQ----Q-PVVIPGYEGKTPLFNIFDK-VRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEI
target LARKHTTCCSLSHRFYRLANECAQV--LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 1s4f.3 QKYY----YK--KEWHKFIDTITDHMTEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCEST------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNN-- 1s4f.3 PYK-----------------------------SFNRVARIHVCGDDGFLITEKGLGL--KFANKGMQILHEAGKPQKITE
target -VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 1s4f.3 GEKMKVAYRF-------EDIEFCSHTPVPVRWSDNTSSHMAGRDTAVILSKMATRLD-----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1s4f.3 ---------------------------------------------------------------
|
| 1s4f.4.A | RNA-dependent RNA polymerase
Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV) | 0.07 | | 14.64 | 0.26 | 552-846 | X-ray | 3.00 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1s4f.4 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1s4f.4 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1s4f.4 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1s4f.4 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1s4f.4 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1s4f.4 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1s4f.4 -----------------------------------------------------------------------KRPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 1s4f.4 EAKTRLAITKVMYNWVKQ----Q-PVVIPGYEGKTPLFNIFDK-VRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEI
target LARKHTTCCSLSHRFYRLANECAQV--LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 1s4f.4 QKYY----YK--KEWHKFIDTITDHMTEVPVITADGEVYIRNGQRGSGQPDTSAGNSMLNVLTMMYAFCEST------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVAS--IKNFKSVLYYQNN-- 1s4f.4 PYK-----------------------------SFNRVARIHVCGDDGFLITEKGLGL--KFANKGMQILHEAGKPQKITE
target -VFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD-YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 1s4f.4 GEKMKVAYRF-------EDIEFCSHTPVPVRWSDNTSSHMAGRDTAVILSKMATRLD-----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1s4f.4 ---------------------------------------------------------------
|
| 5zqk.1.A | Non Structural Protein 5
Dengue Virus Non Structural Protein 5 | 0.05 | | 17.92 | 0.26 | 588-867 | X-ray | 2.30 | monomer | 1 x SAM, 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5zqk.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5zqk.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5zqk.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5zqk.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5zqk.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5zqk.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5zqk.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN-MLRIMASLVLA 5zqk.1 ---------------------------VEGEGLHKLG--YILRDVS-KKEGGAMYADDTAGWDTRITLEDLKNEE-MVTN
target RKHTTCCSLSHRFYRLANECAQVLSEM--VM--------CGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLS 5zqk.1 HM-------EGEHKKLAEAIFKLTYQNKVVRVQRPTPRGTVMDIISRRDQRGSGQVVTYGLNTFTNMEAQLIRQ----ME
target TDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLY 5zqk.1 GEG--VFKSIQ-QLTAT-EE-----IA-----VKNWLVRVGRERLSRMAISGDDCVVKPL-----------DDRFASALT
target YQNNVFMSEAK--CWTETDL--TKGPHEFCSQHTMLVK-QGDDYVYLPYPDPSRILGAGCFVDDIV-KT----------- 5zqk.1 ALNDMGKVRKDIQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYA
target ------DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAM 5zqk.1 QMWSLMYFHRRDLRLAANAICSA---------------------------------------------------------
target YTPHTVLQ 5zqk.1 --------
|
| 5yf8.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A-E472A mutant) | 0.07 | | 14.83 | 0.25 | 552-845 | X-ray | 3.40 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5yf8.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5yf8.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5yf8.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5yf8.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5yf8.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5yf8.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5yf8.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 5yf8.1 EAKTRLAITKV----MYKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 5yf8.1 QKY----YFK--KKWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ---NN- 5yf8.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALG--------EKFASKGVQILAAAGK
target -VFMSEA-K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 5yf8.1 PQKITEGDKMKVAY---QFDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRL----------------------
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5yf8.1 -----------------------------------------------------------------
|
| 6ae7.1.A | RdRp catalytic
Crystals structure of Classical swine fever virus NS5B (residues 1-672, E472A mutant) | 0.07 | | 14.83 | 0.25 | 552-845 | X-ray | 3.80 | monomer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6ae7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6ae7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6ae7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6ae7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6ae7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6ae7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6ae7.1 -----------------------------------------------------------------------KKPRVIQYP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFY---GGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLV 6ae7.1 EAKTRLAITKV----MYKWVKQ-KPVVIPGYEGKTPLFQIFDKVK-KEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDI
target LARKHTTCCSLSHRFYRLANECAQ--VLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKI 6ae7.1 QKY----YFK--KKWHKFIDTLTMHMTEVPVICADGEVYIRKGQRGSGQPDTSAGNSMLNVLTMVYAFCEAT------GV
target ADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQ---NNV 6ae7.1 PYK---------------------S--------FDRVAKIHVCGDDGFLITERALGE--------KFASKGVQILYAAGK
target --FMSE-AKC-WTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAY 6ae7.1 PQKITEGDKMKVAY---QFDDIEFCSHTPIQVRWSDNTSSYMPGRNTTTILAKMATRL----------------------
target PLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6ae7.1 -----------------------------------------------------------------
|
| 4khr.1.A | NS5B RNA-dependent RNA polymerase
HCV NS5B GT1A C316Y with GSK5852 | 0.07 | | 16.17 | 0.25 | 552-846 | X-ray | 2.45 | monomer | 1 x 1PV | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4khr.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4khr.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4khr.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4khr.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4khr.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4khr.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4khr.1 -----------------------------------------------------------------------KPARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4khr.1 DLG----VRVCEKMALYDVVSKLPLA-VMG--SSYGFQYSPGQRVEFLVQ-AWKSKKTPMGFSYDTRCFDSTVTESDIRT
target ASLVLARKHTTCCSLSHRFYRLANECAQVL---SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4khr.1 EEAIYQC----CDL-DPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCRASGVLTTSCGNTLTCYIKARAACRA-----
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4khr.1 ------------A------------GL-------------QDCTMLVYGDDLVVICESAGVQE-DAASLRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGD-DYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4khr.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETA-----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4khr.1 ---------------------------------------------------------------
|
| 4khm.1.A | HCV Polymerase
HCV NS5B GT1A with GSK5852 | 0.07 | | 16.24 | 0.25 | 553-846 | X-ray | 1.70 | monomer | 1 x 1PV | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4khm.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4khm.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4khm.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4khm.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4khm.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4khm.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4khm.1 ------------------------------------------------------------------------PARLIVFP
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYG-G------WHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIM 4khm.1 DLG----VRVCEKMALYDVVSKLPLA-VMG--SSYGFQYSPGQRVEFL-VQAWKSKKTPMGFSYDTRCFDSTVTESDIRT
target ASLVLARKHTTCCSLSHRFYRLANECAQVL---SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLST 4khm.1 EEAIYQC----CDL-DPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCRASGVLTTSCGNTLTCYIKARAACR------
target DGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQN 4khm.1 -----------AA------------GL-------------QDCTMLVCGDDLVVICESAGVQ-EDAASLRAFTEAMTRYS
target NVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPL 4khm.1 APPGDPPQ-PEY---DLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETA-----------------------
target TKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4khm.1 ---------------------------------------------------------------
|
| 5i61.1.A | Potential RNA-dependent RNA polymerase
Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus | 0.07 | | 12.02 | 0.25 | 550-847 | X-ray | 2.40 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5i61.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5i61.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5i61.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5i61.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5i61.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5i61.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5i61.1 ---------------------------------------------------------------------TDVKQRVVWMF
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDV-ENPHLMGWDYPKCDRAMPNMLRIMASLVLA 5i61.1 PFAVNIRELQVYQPLILTFQRLGLVPAWVSMEAV----DRRITKMFDTKGPRDVVVCTDFSKFDQHFNPTCQSVAKELLA
target RKHTTCCSLSHRFYRLANECAQVL--SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5i61.1 DL----LTGQE-AVDWLERVFPIKYAIPLAYNWGEIRYGIHGMGSGSGGTNADETLVHRVLQHEAAISH----H-T----
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5i61.1 ------------------T------------L--NPNSQCLGDDGVLTYPGI--------SAEDVMQSY-SRHGLDMNLE
target KCWTETDLTKGPHEFCSQHTMLV-KQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 5i61.1 KQYVSK----QDCTYLRRWHHTDYRVDG--MCVGVYSTMRALGRLAMQERY-----------------------------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5i61.1 --------------------------------------------------------
|
| 5i61.2.A | Potential RNA-dependent RNA polymerase
Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus | 0.07 | | 12.02 | 0.25 | 550-847 | X-ray | 2.40 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5i61.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5i61.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5i61.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5i61.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5i61.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5i61.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5i61.2 ---------------------------------------------------------------------TDVKQRVVWMF
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDV-ENPHLMGWDYPKCDRAMPNMLRIMASLVLA 5i61.2 PFAVNIRELQVYQPLILTFQRLGLVPAWVSMEAV----DRRITKMFDTKGPRDVVVCTDFSKFDQHFNPTCQSVAKELLA
target RKHTTCCSLSHRFYRLANECAQVL--SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5i61.2 DL----LTGQE-AVDWLERVFPIKYAIPLAYNWGEIRYGIHGMGSGSGGTNADETLVHRVLQHEAAISH----H-T----
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5i61.2 ------------------T------------L--NPNSQCLGDDGVLTYPGI--------SAEDVMQSY-SRHGLDMNLE
target KCWTETDLTKGPHEFCSQHTMLV-KQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 5i61.2 KQYVSK----QDCTYLRRWHHTDYRVDG--MCVGVYSTMRALGRLAMQERY-----------------------------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5i61.2 --------------------------------------------------------
|
| 5i62.1.A | Potential RNA-dependent RNA polymerase
Crystal structure of the insertion loop deletion mutant of the RNA-dependent RNA polymerase of a human picorbirnavirus | 0.08 | | 12.02 | 0.25 | 550-847 | X-ray | 2.00 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5i62.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5i62.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5i62.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5i62.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5i62.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5i62.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5i62.1 ---------------------------------------------------------------------TDVKQRVVWMF
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDV-ENPHLMGWDYPKCDRAMPNMLRIMASLVLA 5i62.1 PFAVNIRELQVYQPLILTFQRLGLVPAWVSMEAV----DRRITKMFDTKGPRDVVVCTDFSKFDQHFNPTCQSVAKELLA
target RKHTTCCSLSHRFYRLANECAQVL--SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5i62.1 DL----LTGQE-AVDWLERVFPIKYAIPLAYNWGEIRYGIHGMGSGSGGTNADETLVHRVLQHEAAISH----H-T----
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5i62.1 ------------------T------------L--NPNSQCLGDDGVLTYPGI--------SAEDVMQSY-SRHGLDMNLE
target KCWTETDLTKGPHEFCSQHTMLV-KQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 5i62.1 KQYVSK----QDCTYLRRWHHTDYRVDG--MCVGVYSTMRALGRLAMQERY-----------------------------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5i62.1 --------------------------------------------------------
|
| 4k6m.1.A | Polyprotein
Crystal Structure of the full-length Japanese encephalitis virus NS5 | 0.05 | | 18.35 | 0.23 | 611-867 | X-ray | 2.60 | monomer | 1 x SAH, 2 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4k6m.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4k6m.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4k6m.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4k6m.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4k6m.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4k6m.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4k6m.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPN-MLRIMASLVLA 4k6m.1 --------------------------------------------------GGKMYADDTAGWDTRITRTDLENEA-KVLE
target RKHTTCCSLSHRFYR-LANECAQVLSEMV-------MCGG----SLYVKPGGTSSGDATTAYANSVFNICQAVTANVNAL 4k6m.1 LL--------DGEHRMLARAIIELTYRHKVVKVMRPAAEGKTVMDVISREDQRGSGQVVTYALNTFTNIAVQLVR----L
target LSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNF 4k6m.1 MEAEG-VIGPQHLEQLPRK-NK-------------IAVRTWLFENGEERVTRMAISGDDCVVKPLDD-----------RF
target KSVLYYQNNVFMSEAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV--------- 4k6m.1 ATALHFLNAMSKVRKDIQEWKPSHGWHDWQQVPFCSNHFQEIVMKDGRSIVVPCRGQDELIGRARISPGAGWNVKDTACL
target ---------KTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPE 4k6m.1 AKAYAQMWLLLYFHRRDLRLMANAICSA----------------------------------------------------
target FYEAMYTPHTVLQ 4k6m.1 -------------
|
| 3gsz.1.A | RNA-directed RNA polymerase
Structure of the genotype 2B HCV polymerase | 0.06 | | 13.06 | 0.24 | 605-885 | X-ray | 1.90 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3gsz.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3gsz.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3gsz.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3gsz.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3gsz.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3gsz.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3gsz.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3gsz.1 --------------------------------------------AWGSKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3gsz.1 ----CSL-PQEARTVIHSLTERLYVGGPMTNSKGQSCGYRRCRASGVFTTSMGNTMTCYIKALAA-----C---------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3gsz.1 ---KAA------------GI-------------VDPVMLVCGDDLVVISESQGNE-EDERNLRAFTEAMTR---YSAPPG
target -KC-WTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 3gsz.1 DLPRPE---YDLELITSCSSNVSVALDSRGRRRYFLTRDPTTPITRAAWETVRH--S---PVNSWLGNIIQYAPTIWVRM
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3gsz.1 VIMTHFFSILL-----------------------------------------------
|
| 5uj2.1.A | Genome polyprotein
Crystal structure of HCV NS5B genotype 2A JFH-1 isolate with S15G E86Q E87Q C223H V321I mutations and Delta8 neta hairpoin loop deletion in complex with GS-639476 (diphsohate version of GS-9813), Mn2+ and symmetrical primer template 5'-AUAAAUUU | 0.06 | | 13.12 | 0.24 | 606-885 | X-ray | 2.90 | monomer | 3 x MN, 1 x 8B4, 1 x A-U-A-A-A-U-U-U, 1 x A-A-A-U-U-U | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5uj2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5uj2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5uj2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5uj2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5uj2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5uj2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5uj2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5uj2.1 ---------------------------------------------WAEKKDPMGFSYDTRHFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5uj2.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5uj2.1 -------KA--------AGI-------------VAPTMLVCGDDLIVISESQGTE-EDERNLRAFTEAMTRYS---APPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 5uj2.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH-----SPINSWLGNIIQYAPTIWVRM
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5uj2.1 VLMTHFFSILM-----------------------------------------------
|
| 4e76.1.A | RNA-directed RNA polymerase
Apo crystal structure of HCV NS5B genotype 2A JFH-1 isolate with beta hairpin loop deletion | 0.06 | | 13.57 | 0.24 | 605-884 | X-ray | 2.50 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4e76.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4e76.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4e76.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4e76.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4e76.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4e76.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4e76.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4e76.1 --------------------------------------------AWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4e76.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4e76.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRYS---APPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 4e76.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAPTIWVRM
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4e76.1 VLMTHFFSIL------------------------------------------------
|
| 4wt9.1.A | RNA-directed RNA polymerase
APO CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH E86Q E87Q S15G C223H V321I AND DELTA8 MUTATIONS | 0.06 | | 13.21 | 0.23 | 605-874 | X-ray | 2.50 | monomer | 1 x PG6 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wt9.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wt9.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wt9.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wt9.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wt9.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wt9.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4wt9.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4wt9.1 --------------------------------------------AWAEKKDPMGFSYDTRHFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4wt9.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS-E 4wt9.1 -------KA--------AGI-------------VAPTMLVCGDDLIVISESQGTEE-DERNLRAFTEAMTRYSAP-PGDP
target AKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQ 4wt9.1 PR-PEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAPTIWVRM-
target EYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wt9.1 ---------------------------------------------------------
|
| 4wtc.1.A | RNA-directed RNA polymerase
CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH CDP, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-AGAAAUUU | 0.06 | | 13.21 | 0.23 | 605-874 | X-ray | 2.75 | monomer | 3 x MN, 1 x CDP, 1 x A-G-A-A-A-U-U-U, 1 x A-A-A-U-U-U | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4wtc.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4wtc.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4wtc.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4wtc.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4wtc.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4wtc.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4wtc.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4wtc.1 --------------------------------------------AWAEKKDPMGFSYDTRHFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4wtc.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS-E 4wtc.1 -------KA--------AGI-------------VAPTMLVCGDDLIVISESQGTEE-DERNLRAFTEAMTRYSAP-PGDP
target AKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQ 4wtc.1 PR-PEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAPTIWVRM-
target EYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4wtc.1 ---------------------------------------------------------
|
| 5w2e.1.A | Genome polyprotein
HCV NS5B RNA-dependent RNA polymerase in complex with non-nucleoside inhibitor MK-8876 | 0.06 | | 15.31 | 0.22 | 603-868 | X-ray | 2.80 | monomer | 1 x 9VY | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5w2e.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5w2e.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5w2e.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5w2e.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5w2e.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5w2e.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5w2e.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5w2e.1 ------------------------------------------VNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5w2e.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5w2e.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGVQ-EDAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 5w2e.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5w2e.1 --------------------------------------------------------
|
| 2xi2.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-H77 NS5B APO POLYMERASE | 0.06 | | 14.83 | 0.22 | 603-868 | X-ray | 1.80 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xi2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xi2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xi2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xi2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xi2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xi2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xi2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2xi2.1 ------------------------------------------VQAWKSKKTPMGFSYDTRCFDSTVTESDIRTEEAIYQC
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2xi2.1 ----CDL-DPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCRASGVLTTSCGNTLTCYIKARAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2xi2.1 -----A------------GL-------------QDCTMLVCGDDLVVICESAGVQE-DAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2xi2.1 Q-PEY---DLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMFAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xi2.1 --------------------------------------------------------
|
| 1gx6.1.A | RNA-DIRECTED RNA POLYMERASE
Hepatitis C Virus RNA polymerase in complex with UTP and manganese | 0.06 | | 15.38 | 0.22 | 604-868 | X-ray | 1.85 | homo-dimer | 6 x UTP, 8 x MN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1gx6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1gx6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1gx6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1gx6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1gx6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1gx6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1gx6.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 1gx6.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 1gx6.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 1gx6.1 ----AA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 1gx6.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1gx6.1 --------------------------------------------------------
|
| 2wrm.1.A | RNA-DIRECTED RNA POLYMERASE
IDENTIFICATION OF NOVEL ALLOSTERIC INHIBITORS OF HEPATITIS C VIRUS NS5B POLYMERASE THUMB DOMAIN (SITE II) BY STRUCTURE-BASED DESIGN | 0.06 | | 15.46 | 0.22 | 605-868 | X-ray | 1.95 | homo-dimer | 6 x QQ3 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2wrm.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2wrm.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2wrm.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2wrm.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2wrm.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2wrm.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2wrm.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2wrm.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2wrm.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2wrm.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2wrm.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2wrm.1 --------------------------------------------------------
|
| 2who.1.A | RNA-DIRECTED RNA POLYMERASE
CRYSTAL STRUCTURE OF HEPATITIS C VIRUS NS5B POLYMERASE FROM 1B GENOTYPE IN COMPLEX WITH A NON-NUCLEOSIDE INHIBITOR | 0.06 | | 15.46 | 0.22 | 605-868 | X-ray | 2.00 | monomer | 2 x MN, 1 x VGI | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2who.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2who.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2who.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2who.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2who.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2who.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2who.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2who.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2who.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2who.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2who.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2who.1 --------------------------------------------------------
|
| 2giq.1.A | RNA-directed RNA polymerase
Hepatitis C virus RNA-dependent RNA polymerase NS5B with NNI-2 inhibitor | 0.06 | | 15.46 | 0.22 | 605-868 | X-ray | 1.65 | monomer | 1 x NN2 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2giq.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2giq.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2giq.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2giq.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2giq.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2giq.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2giq.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2giq.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2giq.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2giq.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2giq.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2giq.1 --------------------------------------------------------
|
| 2o5d.1.A | HCV
Thiazolone-acylsulfonamides as novel HCV NS5B polymerase allosteric inhibitors: Convergence of structure-based drug design and X-ray crystallographic study | 0.07 | | 15.46 | 0.22 | 605-868 | X-ray | 2.20 | monomer | 1 x VR1 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2o5d.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2o5d.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2o5d.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2o5d.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2o5d.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2o5d.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2o5d.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2o5d.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2o5d.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2o5d.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGVQ-EDAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2o5d.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2o5d.1 --------------------------------------------------------
|
| 2wcx.1.A | RNA-DIRECTED RNA POLYMERASE
CRYSTAL STRUCTURE OF HEPATITIS C VIRUS NS5B POLYMERASE IN COMPLEX WITH THIENOPYRROLE-BASED FINGER-LOOP INHIBITORS | 0.06 | | 15.46 | 0.22 | 605-868 | X-ray | 2.00 | monomer | 2 x MN, 1 x VGC | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2wcx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2wcx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2wcx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2wcx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2wcx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2wcx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2wcx.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2wcx.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2wcx.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2wcx.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2wcx.1 QPEY----DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2wcx.1 --------------------------------------------------------
|
| 2d3z.1.A | polyprotein
X-ray crystal structure of hepatitis C virus RNA-dependent RNA polymerase in complex with non-nucleoside analogue inhibitor | 0.06 | | 14.98 | 0.22 | 604-867 | X-ray | 1.80 | monomer | 1 x FIH | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2d3z.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2d3z.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2d3z.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2d3z.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2d3z.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2d3z.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2d3z.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2d3z.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2d3z.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2d3z.1 ----AA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2d3z.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2d3z.1 --------------------------------------------------------
|
| 4eo6.1.A | RNA-directed RNA polymerase
HCV NS5B polymerase inhibitors: Tri-substituted acylhydrazines as tertiary amide bioisosteres | 0.06 | | 14.98 | 0.22 | 604-867 | X-ray | 1.79 | monomer | 1 x 0S2 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4eo6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4eo6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4eo6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4eo6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4eo6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4eo6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4eo6.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4eo6.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4eo6.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4eo6.1 -------RA--------AKL-------------QDCTMLVNGDDLVVICESAGVQ-EDAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 4eo6.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4eo6.1 --------------------------------------------------------
|
| 3qgi.1.A | RNA-directed RNA polymerase
Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide | 0.06 | | 14.98 | 0.22 | 605-868 | X-ray | 1.80 | monomer | 1 x 33F | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3qgi.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3qgi.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3qgi.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3qgi.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3qgi.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3qgi.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3qgi.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3qgi.1 --------------------------------------------AWKSKKTPMGFSYDTRCFDSTVTESDIRTEEAIYQC
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3qgi.1 ----CDL-DPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCRASGVLTTSCGNTLTCYIKARAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3qgi.1 ----AA------------GL-------------QDCTMLVCGDDLVVICESAGVQ-EDAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3qgi.1 Q-PEY---DLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMFAP--------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3qgi.1 --------------------------------------------------------
|
| 1csj.1.A | HEPATITIS C VIRUS RNA POLYMERASE (NS5B)
CRYSTAL STRUCTURE OF THE RNA-DEPENDENT RNA POLYMERASE OF HEPATITIS C VIRUS | 0.06 | | 14.98 | 0.22 | 604-867 | X-ray | 2.80 | homo-dimer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1csj.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1csj.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1csj.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1csj.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1csj.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1csj.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1csj.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 1csj.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 1csj.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 1csj.1 ----AA------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 1csj.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1csj.1 --------------------------------------------------------
|
| 4kb7.1.A | HCV Polymerase
HCV NS5B GT1B N316Y with CMPD 32 | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 1.85 | monomer | 1 x 690 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4kb7.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4kb7.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4kb7.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4kb7.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4kb7.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4kb7.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4kb7.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4kb7.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4kb7.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4kb7.1 ----AA------------KL-------------QDCTMLVYGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 4kb7.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4kb7.1 --------------------------------------------------------
|
| 2dxs.1.A | Genome polyprotein
Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 2.20 | monomer | 1 x JTP | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2dxs.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2dxs.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2dxs.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2dxs.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2dxs.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2dxs.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2dxs.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2dxs.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2dxs.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2dxs.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2dxs.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2dxs.1 --------------------------------------------------------
|
| 1nhu.1.A | HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE
Hepatitis C virus RNA polymerase in complex with non-nucleoside analogue inhibitor | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 2.00 | monomer | 1 x 153 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1nhu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1nhu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1nhu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1nhu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1nhu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1nhu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1nhu.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 1nhu.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 1nhu.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 1nhu.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 1nhu.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1nhu.1 --------------------------------------------------------
|
| 3hhk.1.A | HCV NS5 polymerase
HCV NS5b polymerase complex with a substituted benzothiadizine | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 1.70 | monomer | 1 x 77Z | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3hhk.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3hhk.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3hhk.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3hhk.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3hhk.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3hhk.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3hhk.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3hhk.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3hhk.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3hhk.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3hhk.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3hhk.1 --------------------------------------------------------
|
| 4tn2.1.A | Genome polyprotein
NS5b in complex with lactam-thiophene carboxylic acids | 0.07 | | 15.05 | 0.22 | 605-867 | X-ray | 2.70 | monomer | 1 x 33J | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4tn2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4tn2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4tn2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4tn2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4tn2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4tn2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4tn2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4tn2.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4tn2.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4tn2.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGVQE-DAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 4tn2.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4tn2.1 --------------------------------------------------------
|
| 4txs.1.A | Polyprotein
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 2.78 | monomer | 1 x 3AQ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4txs.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4txs.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4txs.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4txs.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4txs.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4txs.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4txs.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4txs.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4txs.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4txs.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 4txs.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4txs.1 --------------------------------------------------------
|
| 2awz.1.A | Genome polyprotein
Hepatitis C Virus NS5b RNA Polymerase in complex with a covalent inhibitor (5h) | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 2.15 | monomer | 1 x 5H | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2awz.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2awz.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2awz.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2awz.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2awz.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2awz.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2awz.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2awz.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2awz.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2awz.1 ----AA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2awz.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2awz.1 --------------------------------------------------------
|
| 2zku.1.A | Genome polyprotein
Structure of hepatitis C virus NS5B polymerase in a new crystal form | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 1.95 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2zku.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2zku.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2zku.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2zku.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2zku.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2zku.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2zku.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2zku.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2zku.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2zku.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2zku.1 QPEY----DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2zku.1 --------------------------------------------------------
|
| 4ty8.2.A | Polyprotein
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 2.78 | monomer | 1 x 3AV | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ty8.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ty8.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ty8.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ty8.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ty8.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ty8.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ty8.2 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4ty8.2 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4ty8.2 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4ty8.2 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 4ty8.2 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ty8.2 --------------------------------------------------------
|
| 4ty9.1.A | Polyprotein
An Ligand-observed Mass Spectrometry-based Approach Integrated into the Fragment Based Lead Discovery Pipeline | 0.06 | | 15.05 | 0.22 | 605-867 | X-ray | 2.78 | monomer | 1 x 3B0 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4ty9.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4ty9.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4ty9.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4ty9.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4ty9.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4ty9.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4ty9.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4ty9.1 --------------------------------------------TWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4ty9.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 4ty9.1 -----A------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 4ty9.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4ty9.1 --------------------------------------------------------
|
| 3cwj.1.A | RNA-DIRECTED RNA POLYMERASE
Crystal structure of hcv ns5b polymerase with a novel pyridazinone inhibitor | 0.06 | | 15.12 | 0.22 | 604-865 | X-ray | 2.40 | monomer | 1 x 321 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3cwj.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3cwj.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3cwj.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3cwj.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3cwj.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3cwj.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3cwj.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3cwj.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3cwj.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3cwj.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3cwj.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3cwj.1 --------------------------------------------------------
|
| 2qe5.1.A | RNA-directed RNA polymerase
Structure of HCV NS5B Bound to an Anthranilic Acid Inhibitor | 0.06 | | 15.12 | 0.22 | 604-865 | X-ray | 2.60 | monomer | 1 x 617 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2qe5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2qe5.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2qe5.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2qe5.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2qe5.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2qe5.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2qe5.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2qe5.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2qe5.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2qe5.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2qe5.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2qe5.1 --------------------------------------------------------
|
| 2qe2.1.A | RNA-directed RNA polymerase
Structure of HCV NS5B Bound to an Anthranilic Acid Inhibitor | 0.06 | | 15.12 | 0.22 | 604-865 | X-ray | 2.90 | monomer | 1 x 452 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2qe2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2qe2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2qe2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2qe2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2qe2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2qe2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2qe2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2qe2.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2qe2.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2qe2.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2qe2.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2qe2.1 --------------------------------------------------------
|
| 3vqs.1.A | RNA-directed RNA polymerase
Crystal structure of HCV NS5B RNA polymerase with a novel piperazine inhibitor | 0.07 | | 15.12 | 0.22 | 604-865 | X-ray | 1.90 | monomer | 1 x JT1 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3vqs.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3vqs.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3vqs.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3vqs.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3vqs.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3vqs.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3vqs.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3vqs.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3vqs.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3vqs.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3vqs.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3vqs.1 --------------------------------------------------------
|
| 3vqs.2.A | RNA-directed RNA polymerase
Crystal structure of HCV NS5B RNA polymerase with a novel piperazine inhibitor | 0.07 | | 15.12 | 0.22 | 604-865 | X-ray | 1.90 | monomer | 1 x JT1 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3vqs.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3vqs.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3vqs.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3vqs.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3vqs.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3vqs.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3vqs.2 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3vqs.2 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3vqs.2 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3vqs.2 -----------------AKL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3vqs.2 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3vqs.2 --------------------------------------------------------
|
| 2gc8.1.A | RNA-directed RNA polymerase
Structure of a Proline Sulfonamide Inhibitor Bound to HCV NS5b Polymerase | 0.07 | | 15.12 | 0.22 | 604-865 | X-ray | 2.20 | monomer | 1 x 885 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2gc8.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2gc8.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2gc8.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2gc8.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2gc8.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2gc8.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2gc8.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2gc8.1 -------------------------------------------NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLSE---MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2gc8.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2gc8.1 -----------------AKL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 2gc8.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM-----------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2gc8.1 --------------------------------------------------------
|
| 1yvx.1.A | RNA dependent RNA polymerase
Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor | 0.06 | | 13.11 | 0.22 | 606-870 | X-ray | 2.00 | monomer | 1 x IPC | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1yvx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1yvx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1yvx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1yvx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1yvx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1yvx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1yvx.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 1yvx.1 ---------------------------------------------WAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 1yvx.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQSCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 1yvx.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRYS---APPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 1yvx.1 DPPRPEY---DLELITSCSSNVSVALGPQGRRRYYLTRDPTTPIARAAWETVRH--S---PVNSWLGNIIQYAPTI----
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1yvx.1 ----------------------------------------------------------
|
| 1yuy.1.A | RNA-Dependent RNA polymerase
HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE GENOTYPE 2a | 0.06 | | 13.11 | 0.22 | 606-870 | X-ray | 1.90 | monomer | | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1yuy.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1yuy.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1yuy.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1yuy.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1yuy.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1yuy.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1yuy.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 1yuy.1 ---------------------------------------------WAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 1yuy.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQSCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 1yuy.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRYS---APPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 1yuy.1 DPPRPEY---DLELITSCSSNVSVALGPQGRRRYYLTRDPTTPIARAAWETVRH--S---PVNSWLGNIIQYAPTI----
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1yuy.1 ----------------------------------------------------------
|
| 3mf5.1.A | RNA-directed RNA polymerase
Hepatitis C virus polymerase NS5B (BK) with amide bioisostere thumb site inhibitor | 0.06 | | 15.12 | 0.22 | 606-867 | X-ray | 2.00 | homo-dimer | 2 x HJZ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3mf5.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3mf5.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3mf5.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3mf5.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3mf5.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3mf5.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3mf5.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3mf5.1 ---------------------------------------------WKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECAQVLS-E--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3mf5.1 ----CDL-APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASAACR-------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3mf5.1 ----AA------------KL-------------QDCTMLVNGDDLVVICESAGTQE-DAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3mf5.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3mf5.1 --------------------------------------------------------
|
| 3i5k.1.A | RNA-directed RNA polymerase
Crystal structure of the NS5B polymerase from Hepatitis C Virus (HCV) strain JFH1 | 0.06 | | 14.15 | 0.22 | 605-868 | X-ray | 2.20 | monomer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3i5k.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3i5k.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3i5k.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3i5k.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3i5k.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3i5k.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3i5k.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3i5k.1 --------------------------------------------AWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3i5k.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3i5k.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRY---SAPPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 3i5k.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVR--HS---PINSWLGNIIQYAP------
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3i5k.1 ----------------------------------------------------------
|
| 5twm.1.A | NS5B RNA-dependent RNA POLYMERASE
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS GENOTYPE 2A STRAIN JFH1 L30S NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 5-[3-(tert-butylcarbamoyl)phenyl]-6-(ethylamino)-2-(4-fluorophenyl)-N-methylfuro[2,3-b]pyridine-3-carboxamide | 0.06 | | 14.15 | 0.22 | 605-868 | X-ray | 1.97 | monomer | 1 x 7NG, 1 x PE5 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5twm.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5twm.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5twm.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5twm.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5twm.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5twm.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5twm.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5twm.1 --------------------------------------------AWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5twm.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5twm.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRY---SAPPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 5twm.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAP------
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5twm.1 ----------------------------------------------------------
|
| 5qj0.1.A | RNA-dependent RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS GENOTYPE 2A STRAIN JFH1 NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 6-[ethyl(methylsulfonyl)amino]-2-(4-fluorophenyl)-N-methyl-5-(3-{[1-(pyrimidin-2-yl)cyclopropyl]carbamoyl}phenyl)-1-benzofuran-3-carboxamide | 0.06 | | 14.15 | 0.22 | 605-868 | X-ray | 2.08 | monomer | 1 x J6D, 1 x 2PE | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5qj0.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5qj0.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5qj0.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5qj0.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5qj0.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5qj0.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5qj0.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5qj0.1 --------------------------------------------AWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5qj0.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5qj0.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRY---SAPPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 5qj0.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAP------
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5qj0.1 ----------------------------------------------------------
|
| 5qj1.1.A | RNA-dependent RNA polymerase
CRYSTAL STRUCTURE OF THE HEPATITIS C VIRUS GENOTYPE 2A STRAIN JFH1 L30S NS5B RNA-DEPENDENT RNA POLYMERASE IN COMPLEX WITH 6-(ethylamino)-2-(4-fluorophenyl)-5-(3-{[1-(5-fluoropyrimidin-2-yl)cyclopropyl]carbamoyl}-4-methoxyphenyl)-N-methyl-1-benzofuran-3-carboxamide | 0.05 | | 14.15 | 0.22 | 605-868 | X-ray | 2.17 | monomer | 1 x J6J | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5qj1.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5qj1.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5qj1.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5qj1.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5qj1.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5qj1.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5qj1.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5qj1.1 --------------------------------------------AWAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 5qj1.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 5qj1.1 -------KA--------AGI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRY---SAPPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 5qj1.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLTRDPTTPLARAAWETVRH--S---PINSWLGNIIQYAP------
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5qj1.1 ----------------------------------------------------------
|
| 2xym.1.A | RNA-DIRECTED RNA POLYMERASE
HCV-JFH1 NS5B T385A MUTANT | 0.06 | | 14.22 | 0.22 | 606-868 | X-ray | 1.77 | homo-dimer | | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2xym.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2xym.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2xym.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2xym.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2xym.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2xym.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2xym.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2xym.1 ---------------------------------------------WAEKKDPMGFSYDTRCFDSTVTERDIRTEESIYQA
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 2xym.1 ----CSL-PEEARTAIHSLTERLYVGGPMFNSKGQTCGYRRCRASGVLTTSMGNTITCYVKALAAC--------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 2xym.1 ---KAA------------GI-------------VAPTMLVCGDDLVVISESQGTE-EDERNLRAFTEAMTRYS---APPG
target -K-CWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPN 2xym.1 DPPRPEY---DLELITSCSSNVSVALGPRGRRRYYLARDPTTPLARAAWETVRH--S---PINSWLGNIIQYAP------
target QEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2xym.1 ----------------------------------------------------------
|
| 1yvf.1.A | HCV NS5B POLYMERASE
Hepatitis C virus NS5B RNA-dependent RNA polymerase complex with inhibitor PHA-00729145 | 0.06 | | 14.63 | 0.22 | 606-867 | X-ray | 2.50 | monomer | 1 x PH7 | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 1yvf.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 1yvf.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 1yvf.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 1yvf.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 1yvf.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 1yvf.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 1yvf.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 1yvf.1 ---------------------------------------------WKAKKCPMGFSYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANEC-AQVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 1yvf.1 ----CDL-APEARQAIRSLTERLYVGGPMTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACR-----AA------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 1yvf.1 ------------------KL-------------QDCTMLVNGDDLVVICESAGTQ-EDAASLRVFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 1yvf.1 Q-PEY---DLELITSCSSNVSVAHDASGKRVYYLTRDPTVPLARAAWETAR--HTP---VNSWLGNIIMYA---------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 1yvf.1 --------------------------------------------------------
|
| 3fql.1.A | RNA-directed RNA polymerase
Hepatitis C virus polymerase NS5B (CON1 1-570) with HCV-796 inhibitor | 0.06 | | 14.71 | 0.22 | 606-867 | X-ray | 1.80 | monomer | 1 x 79Z | HHblits | 0.26 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3fql.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3fql.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3fql.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3fql.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3fql.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3fql.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3fql.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3fql.1 ---------------------------------------------WKAKKCPMGFAYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3fql.1 ----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV-FMSE 3fql.1 -----------------AKL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAPPGD-P
target AKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQ 3fql.1 PKP-E-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIMYA--------
target EYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3fql.1 ---------------------------------------------------------
|
| 3hkw.1.A | NS5B RNA-dependent RNA polymerase
HCV NS5B genotype 1a in complex with 1,5 benzodiazepine inhibitor 6 | 0.06 | | 14.29 | 0.22 | 604-863 | X-ray | 1.55 | monomer | 1 x IX6 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3hkw.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3hkw.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3hkw.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3hkw.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3hkw.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3hkw.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3hkw.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3hkw.1 -------------------------------------------QAWKSKKSPMGFSYDTRCFDSTVTESDIRTEEAIYQC
target KHTTCCSLSHRFYRLANECA-QVLSE--MVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 3hkw.1 ----CDL-DPQARVAIKSLTERLYVGGPLTNSKGENCGYRRCRASGVLTTSCGNTLTCYIKARAAC-----R--------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA 3hkw.1 ----A------------AGL-------------QDCTMLVCGDDLVVICESAGVQ-EDAASLRAFTEAMTRYSAPPGDPP
target KCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQE 3hkw.1 Q-PEY---DLELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETARH--TP---VNSWLGNI-------------
target YADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3hkw.1 --------------------------------------------------------
|
| 4tlr.1.A | NS5b
NS5b in complex with lactam-thiophene carboxylic acids | 0.05 | | 14.85 | 0.22 | 606-865 | X-ray | 1.86 | monomer | 1 x 33H, 1 x 79Z | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4tlr.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4tlr.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4tlr.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4tlr.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4tlr.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4tlr.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4tlr.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4tlr.1 ---------------------------------------------WKAKKCPMGFAYDTRCFDSTVTENDIRVEESIYQC
target KHTTCCSLSHRFYRLANECA-QVLS--EMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD 4tlr.1 ----CDL-APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAAAACRA------------
target KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV-FMSE 4tlr.1 -----------------AKL-------------QDCTMLVCGDDLVVICESAGTQ-EDEASLRAFTEAMTRYSAPPGD-P
target AKCWTETDLTKGPHEFCSQHTMLVKQG-DDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQ 4tlr.1 PK-PE-Y--DLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETAR--HTP---VNSWLGNIIM----------
target EYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4tlr.1 ---------------------------------------------------------
|
| 7ziu.1.A | Genome polyprotein
Crystal structure of Ntaya virus NS5 polymerase domain | 0.04 | | 17.26 | 0.18 | 673-867 | X-ray | 2.80 | monomer | 2 x ZN | HHblits | 0.30 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ziu.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ziu.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ziu.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ziu.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ziu.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ziu.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ziu.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ziu.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ziu.1 --------------------------------VISREDQRGSGQVVTYALNTFTNLCVQLIR----CMEGEG-LLKPEEV
target RNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 7ziu.1 EKLERGKQRK-----------IQDWLDKNGTERLASMAVSGDDCVVKPKDD-----------RFATALHFLNSMSKIRKD
target --CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMIE--------------- 7ziu.1 IPEWKQSTGWRNWQDVPFCSHHFHELTMKDGRQIVVPCRHQDELIGRARLSPGSGWSLTETACLSKAYGQMWLLMYFHRR
target --RFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ziu.1 DLRLMANAICSA-----------------------------------------------------------------
|
| 7ziu.2.A | Genome polyprotein
Crystal structure of Ntaya virus NS5 polymerase domain | 0.04 | | 17.26 | 0.18 | 673-867 | X-ray | 2.80 | monomer | 2 x ZN | HHblits | 0.30 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7ziu.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7ziu.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7ziu.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7ziu.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7ziu.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7ziu.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7ziu.2 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7ziu.2 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7ziu.2 --------------------------------VISREDQRGSGQVVTYALNTFTNLCVQLIR----CMEGEG-LLKPEEV
target RNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 7ziu.2 EKLERGKQRK-----------IQDWLDKNGTERLASMAVSGDDCVVKPKDD-----------RFATALHFLNSMSKIRKD
target --CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMIE--------------- 7ziu.2 IPEWKQSTGWRNWQDVPFCSHHFHELTMKDGRQIVVPCRHQDELIGRARLSPGSGWSLTETACLSKAYGQMWLLMYFHRR
target --RFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7ziu.2 DLRLMANAICSA-----------------------------------------------------------------
|
| 4mtp.1.A | RNA dependent RNA polymerase
RdRp from Japanesese Encephalitis Virus | 0.04 | | 18.07 | 0.18 | 672-867 | X-ray | 3.65 | monomer | 2 x ZN | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4mtp.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4mtp.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4mtp.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4mtp.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4mtp.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4mtp.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4mtp.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4mtp.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 4mtp.1 -------------------------------DVISREDQRGSGQVVTYALNTFTNIAVQLVR----LMEAEG-VIGPQHL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 4mtp.1 EQLPRKN-----K---------IAVRTWLFENGEERVTRMAISGDDCVVKPLDD-----------RFATALHFLNAMSKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV------------------KTDG 4mtp.1 RKDIQEWKPSHGWHDWQQVPFCSNHFQEIVMKDGRSIVVPCRGQDELIGRARISPGAGWNVKDTACLAKAYAQMWLLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4mtp.1 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 4hdg.1.A | Polyprotein
Crystal Structure of viral RdRp in complex with GTP | 0.04 | | 18.07 | 0.18 | 672-867 | X-ray | 2.38 | monomer | 1 x GTP, 2 x ZN | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4hdg.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4hdg.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4hdg.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4hdg.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4hdg.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4hdg.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4hdg.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4hdg.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 4hdg.1 -------------------------------DVISREDQRGSGQVVTYALNTFTNIAVQLVR----LMEAEGV-IGPQHL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 4hdg.1 EQLPRKN-----K---------IAVRTWLFENGEERVTRMAISGDDCVVKPLDD-----------RFATALHFLNAMSKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV------------------KTDG 4hdg.1 RKDIQEWKPSHGWHDWQQVPFCSNHFQEIVMKDGRSIVVPCRGQDELIGRARISPGAGWNVKDTACLAKAYAQMWLLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4hdg.1 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 5k5m.1.A | RNA Dependent RNA Polymerase
Co-Crystal Structure of Dengue Virus Serotype 2 RNA Dependent RNA Polymerase with Compound 27 | 0.04 | | 17.96 | 0.18 | 672-867 | X-ray | 2.01 | monomer | 2 x ZN, 1 x 68T, 1 x MES | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5k5m.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5k5m.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5k5m.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5k5m.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5k5m.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5k5m.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5k5m.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5k5m.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5k5m.1 -------------------------------DIISRRDQRGSGQVGTYGLNTFTNMEAQLIR----QMEGEG--VFKSIQ
target RNLQHRLYECLYRNRDVDTDFVNEF-YAYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 5k5m.1 -HLTV------TEEIA-----VQNWLARVGRERLSRMAISGDDCVVKPLDD-----------RFASALTALNDMGKVRKD
target --CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMI---------------- 5k5m.1 IQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYAQMWSLMYFHRR
target -ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5k5m.1 DLRLAANAICSA-----------------------------------------------------------------
|
| 6izx.1.A | Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 2 NS5, bound with RK-0404678 | 0.04 | | 17.96 | 0.18 | 672-867 | X-ray | 2.43 | monomer | 2 x ZN, 9 x CO, 2 x B5C | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6izx.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6izx.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6izx.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6izx.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6izx.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6izx.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6izx.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6izx.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6izx.1 -------------------------------DIISRRDQRGSGQVGTYGLNTFTNMEAQLIR----QMEGEG--VFKSIQ
target RNLQHRLYECLYRNRDVDTDFVNEF-YAYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 6izx.1 -HLTV------TEEIA-----VQNWLARVGRERLSRMAISGDDCVVKPLD-----------DRFASALTALNDMGKVRKD
target --CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMI---------------- 6izx.1 IQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYAQMWSLMYFHRR
target -ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6izx.1 DLRLAANAICSA-----------------------------------------------------------------
|
| 6izy.1.A | Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 2 NS5 | 0.04 | | 17.96 | 0.18 | 672-867 | X-ray | 2.11 | monomer | 4 x CO, 1 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6izy.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6izy.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6izy.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6izy.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6izy.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6izy.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6izy.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6izy.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6izy.1 -------------------------------DIISRRDQRGSGQVGTYGLNTFTNMEAQLIR----QMEGEG--VFKSIQ
target RNLQHRLYECLYRNRDVDTDFVNEF-YAYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 6izy.1 -HLTV------TEEIA-----VQNWLARVGRERLSRMAISGDDCVVKPLD-----------DRFASALTALNDMGKVRKD
target --CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMI---------------- 6izy.1 IQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYAQMWSLMYFHRR
target -ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6izy.1 DLRLAANAICSA-----------------------------------------------------------------
|
| 6izz.1.A | Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 3 NS5, bound with RK-0404678 | 0.04 | | 18.18 | 0.18 | 672-867 | X-ray | 1.97 | monomer | 2 x ZN, 1 x B5C | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6izz.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6izz.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6izz.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6izz.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6izz.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6izz.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6izz.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6izz.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6izz.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLIR----QMEGEGV-LSKTDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 6izz.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMI------------- 6izz.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLKETACLGKAYAQMWALMYF
target ----ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6izz.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 6j00.1.A | Genome polyprotein
The RNA-dependent RNA polymerase domain of dengue 3 NS5 | 0.04 | | 18.18 | 0.18 | 672-867 | X-ray | 2.14 | monomer | 2 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6j00.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6j00.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6j00.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6j00.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6j00.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6j00.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6j00.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6j00.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6j00.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLIR----QMEGEGV-LSKTDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 6j00.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTDGTLMI------------- 6j00.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLKETACLGKAYAQMWALMYF
target ----ERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6j00.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 6kr2.1.A | Genome polyprotein
Crystal structure of Dengue virus nonstructural protein NS5 (form 1) | 0.04 | | 18.18 | 0.18 | 673-867 | X-ray | 3.06 | monomer | 2 x ZN, 1 x SAH | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6kr2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6kr2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6kr2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6kr2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6kr2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6kr2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6kr2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6kr2.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6kr2.1 --------------------------------IISRRDQRGSGQVVTYGLNTFTNMEAQLIRQ----MEGEG--VFKSIQ
target RNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 6kr2.1 -HLTVT-----EE-IA-----VKNWLVRVGRERLSRMAISGDDCVVKPLD-----------DRFASALTALNDM-GKVRK
target C---WTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTD-----------------GTL 6kr2.1 DIQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYAQMWSLMYFHR
target MIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6kr2.1 RDLRLAANAICSA-----------------------------------------------------------------
|
| 6kr3.1.A | Genome polyprotein
Crystal structure of Dengue virus nonstructural protein NS5 (form 2) | 0.04 | | 18.18 | 0.18 | 673-867 | X-ray | 2.93 | monomer | 2 x SAH, 2 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6kr3.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6kr3.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6kr3.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6kr3.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6kr3.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6kr3.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6kr3.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6kr3.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6kr3.1 --------------------------------IISRRDQRGSGQVVTYGLNTFTNMEAQLIRQ----MEGEG--VFKSIQ
target RNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 6kr3.1 -HLTVT-----EE-IA-----VKNWLVRVGRERLSRMAISGDDCVVKPLD-----------DRFASALTALNDM-GKVRK
target C---WTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KTD-----------------GTL 6kr3.1 DIQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQGAGWSLRETACLGKSYAQMWSLMYFHR
target MIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6kr3.1 RDLRLAANAICSA-----------------------------------------------------------------
|
| 4c11.1.A | DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE
Dengue virus RNA dependent RNA polymerase with residues from the NS5 linker region | 0.04 | | 17.58 | 0.18 | 672-867 | X-ray | 2.60 | hetero-1-1-mer | 4 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4c11.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4c11.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4c11.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4c11.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4c11.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4c11.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4c11.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4c11.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 4c11.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 4c11.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 4c11.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4c11.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 2j7w.1.A | POLYPROTEIN
DENGUE VIRUS NS5 RNA DEPENDENT RNA POLYMERASE DOMAIN COMPLEXED WITH 3'DGTP | 0.04 | | 17.58 | 0.18 | 672-867 | X-ray | 2.60 | monomer | 2 x ZN, 1 x GTP | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 2j7w.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 2j7w.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 2j7w.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 2j7w.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 2j7w.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 2j7w.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 2j7w.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 2j7w.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 2j7w.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 2j7w.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 2j7w.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 2j7w.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 4hhj.1.A | Non-structural protein 5
Dengue serotype 3 RNA-dependent RNA polymerase | 0.04 | | 17.58 | 0.18 | 672-867 | X-ray | 1.79 | monomer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4hhj.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4hhj.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4hhj.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4hhj.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4hhj.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4hhj.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4hhj.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4hhj.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 4hhj.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 4hhj.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 4hhj.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4hhj.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 3vws.1.A | Non-structural protein 5
Dengue serotype 3 RNA-dependent RNA polymerase bound to NITD-107 | 0.04 | | 17.58 | 0.18 | 672-867 | X-ray | 2.10 | monomer | 2 x ZN, 2 x VWS | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 3vws.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 3vws.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 3vws.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 3vws.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 3vws.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 3vws.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 3vws.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 3vws.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 3vws.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 3vws.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 3vws.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 3vws.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 5iq6.1.A | RNA dependent RNA polymerase
Crystal structure of Dengue virus serotype 3 RNA dependent RNA polymerase bound to HeE1-2Tyr, a new pyridobenzothizole inhibitor | 0.04 | | 17.58 | 0.18 | 672-867 | X-ray | 3.00 | monomer | 2 x ZN, 1 x 6CJ | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5iq6.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5iq6.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5iq6.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5iq6.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5iq6.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5iq6.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5iq6.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5iq6.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5iq6.1 -------------------------------DIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5iq6.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 5iq6.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5iq6.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 4c11.1.B | DENGUE VIRUS TYPE 3 RNA DEPENDENT RNA POLYMERASE
Dengue virus RNA dependent RNA polymerase with residues from the NS5 linker region | 0.04 | | 17.68 | 0.18 | 673-867 | X-ray | 2.60 | hetero-1-1-mer | 4 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4c11.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4c11.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4c11.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4c11.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4c11.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4c11.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4c11.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4c11.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 4c11.1 --------------------------------IISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 4c11.1 ENPHL--LE-------------KKITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target EA--KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 4c11.1 RKDIPQWQPSKGWHDWQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWSLMYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 4c11.1 HRRDLRLASNAICSA-----------------------------------------------------------------
|
| 5u0b.1.A | Genome polyprotein
Structure of full-length Zika virus NS5 | 0.04 | | 15.85 | 0.18 | 672-867 | X-ray | 3.00 | monomer | 1 x SAH, 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5u0b.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5u0b.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5u0b.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5u0b.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5u0b.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5u0b.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5u0b.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5u0b.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5u0b.1 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5u0b.1 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPID-----------DRFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 5u0b.1 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5u0b.1 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 5dto.1.A | NS5
Dengue virus full length NS5 complexed with viral Cap 0-RNA and SAH | 0.04 | | 18.52 | 0.17 | 671-867 | X-ray | 2.60 | monomer | 2 x ZN, 1 x SAH, 1 x MG, 1 x M7G, 1 x A-G-U-U | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5dto.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5dto.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5dto.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5dto.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5dto.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5dto.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5dto.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5dto.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5dto.1 ------------------------------MDIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGV-LTKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5dto.1 ENPHL--LE-------------KKITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5dto.1 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSIRETACLGKAYAQMWS
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5dto.1 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5dto.1 ----
|
| 5jjs.1.A | Genome polyprotein
Dengue 3 NS5 protein with compound 27 | 0.04 | | 18.52 | 0.17 | 671-867 | X-ray | 1.65 | monomer | 2 x ZN, 1 x 6L2, 1 x MG, 1 x SAH | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5jjs.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5jjs.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5jjs.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5jjs.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5jjs.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5jjs.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5jjs.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5jjs.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5jjs.1 ------------------------------MDIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGV-LTKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5jjs.1 ENPHL--LE-------------KKITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5jjs.1 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWS
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5jjs.1 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5jjs.1 ----
|
| 5u0c.1.A | NS5 RNA polymerase domain
Structure of Zika virus NS5 RNA polymerase domain | 0.05 | | 15.85 | 0.18 | 672-867 | X-ray | 3.00 | monomer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5u0c.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5u0c.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5u0c.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5u0c.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5u0c.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5u0c.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5u0c.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5u0c.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5u0c.1 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5u0c.1 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPIDD-----------RFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-K-----------------TDG 5u0c.1 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5u0c.1 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 5u0c.3.A | NS5 RNA polymerase domain
Structure of Zika virus NS5 RNA polymerase domain | 0.04 | | 15.85 | 0.18 | 672-867 | X-ray | 3.00 | monomer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5u0c.3 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5u0c.3 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5u0c.3 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5u0c.3 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5u0c.3 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5u0c.3 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5u0c.3 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5u0c.3 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5u0c.3 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5u0c.3 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPIDD-----------RFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-K-----------------TDG 5u0c.3 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5u0c.3 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 5u0c.4.A | NS5 RNA polymerase domain
Structure of Zika virus NS5 RNA polymerase domain | 0.04 | | 15.85 | 0.18 | 672-867 | X-ray | 3.00 | monomer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5u0c.4 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5u0c.4 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5u0c.4 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5u0c.4 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5u0c.4 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5u0c.4 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5u0c.4 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5u0c.4 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5u0c.4 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5u0c.4 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPIDD-----------RFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-K-----------------TDG 5u0c.4 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5u0c.4 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 6ux2.1.B | Nonstructural Protein 5
Crystal structure of ZIKV RdRp in complex with STAT2 | 0.05 | | 15.85 | 0.18 | 672-867 | X-ray | 3.01 | hetero-1-1-mer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6ux2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6ux2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6ux2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6ux2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6ux2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6ux2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6ux2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6ux2.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6ux2.1 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 6ux2.1 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPIDD-----------RFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-K-----------------TDG 6ux2.1 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6ux2.1 HRRDLRLMANAICSA-----------------------------------------------------------------
|
| 4v0r.1.A | NS5 POLYMERASE
DENGUE VIRUS FULL LENGTH NS5 COMPLEXED WITH GTP AND SAH | 0.04 | | 18.52 | 0.17 | 671-867 | X-ray | 2.40 | homo-dimer | 4 x ZN, 2 x SAH, 2 x GTP, 2 x MG | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 4v0r.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 4v0r.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 4v0r.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 4v0r.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 4v0r.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 4v0r.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 4v0r.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 4v0r.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 4v0r.1 ------------------------------MDIISRKDQRGSGQVGTYGLNTFTNMEAQLVR----QMEGEGVL-TKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 4v0r.1 ENPHL--LEK-------------KITQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 4v0r.1 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWS
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 4v0r.1 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 4v0r.1 ----
|
| 6ld2.1.A | RNA-directed RNA polymerase NS5
Zika NS5 polymerase domain | 0.04 | | 15.95 | 0.17 | 673-867 | X-ray | 1.40 | monomer | 2 x ZN, 1 x KY3 | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6ld2.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6ld2.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6ld2.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6ld2.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6ld2.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6ld2.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6ld2.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6ld2.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6ld2.1 --------------------------------IISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 6ld2.1 WLLRR-------S-EKV--------TNWLQSNGWDRLKRMAVSGDDCVVKPIDD-----------RFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 6ld2.1 RKDTQEWKPSTGWDNWEEVPFCSHHFNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6ld2.1 HRRDLRLMANAICSS-----------------------------------------------------------------
|
| 6ld1.1.A | RNA-directed RNA polymerase NS5
Zika NS5 polymerase domain | 0.04 | | 15.95 | 0.17 | 673-867 | X-ray | 1.40 | monomer | 2 x ZN | HHblits | 0.27 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6ld1.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6ld1.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6ld1.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6ld1.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6ld1.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6ld1.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6ld1.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6ld1.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6ld1.1 --------------------------------IISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRK-----HFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 6ld1.1 WLLRR-------S-EKV--------TNWLQSNGWDRLKRMAVSGDDCVVKPIDD-----------RFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT-----------------DG 6ld1.1 RKDTQEWKPSTGWDNWEEVPFCSHHFNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYF
target TLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6ld1.1 HRRDLRLMANAICSS-----------------------------------------------------------------
|
| 5ccv.1.A | RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3 | 0.04 | | 18.75 | 0.17 | 673-867 | X-ray | 3.60 | monomer | 2 x ZN, 1 x SAH | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5ccv.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5ccv.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5ccv.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5ccv.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5ccv.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5ccv.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5ccv.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5ccv.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5ccv.1 --------------------------------IISRKDQRGSGQVGTYGLNTFTNMEAQLIRQ----MEGEG-VLSKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLR-----KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5ccv.1 ENPHP--LEK-----K-----I---TQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5ccv.1 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWA
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5ccv.1 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5ccv.1 ----
|
| 5ccv.2.A | RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3 | 0.04 | | 18.75 | 0.17 | 673-867 | X-ray | 3.60 | monomer | 2 x ZN, 1 x SAH | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5ccv.2 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5ccv.2 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5ccv.2 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5ccv.2 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5ccv.2 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5ccv.2 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5ccv.2 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5ccv.2 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5ccv.2 --------------------------------IISRKDQRGSGQVGTYGLNTFTNMEAQLIRQ----MEGEG-VLSKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLR-----KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5ccv.2 ENPHP--LEK-----K-----I---TQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5ccv.2 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWA
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5ccv.2 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5ccv.2 ----
|
| 5ccv.3.A | RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3 | 0.04 | | 18.75 | 0.17 | 673-867 | X-ray | 3.60 | monomer | 2 x ZN, 1 x SAH | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5ccv.3 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5ccv.3 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5ccv.3 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5ccv.3 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5ccv.3 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5ccv.3 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5ccv.3 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5ccv.3 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5ccv.3 --------------------------------IISRKDQRGSGQVGTYGLNTFTNMEAQLIRQ----MEGEG-VLSKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLR-----KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5ccv.3 ENPHP--LEK-----K-----I---TQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5ccv.3 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWA
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5ccv.3 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5ccv.3 ----
|
| 5ccv.5.A | RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3 | 0.04 | | 18.75 | 0.17 | 673-867 | X-ray | 3.60 | monomer | 2 x ZN, 1 x SAH | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5ccv.5 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5ccv.5 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5ccv.5 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5ccv.5 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5ccv.5 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5ccv.5 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5ccv.5 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5ccv.5 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5ccv.5 --------------------------------IISRKDQRGSGQVGTYGLNTFTNMEAQLIRQ----MEGEG-VLSKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLR-----KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5ccv.5 ENPHP--LEK-----K-----I---TQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5ccv.5 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWA
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5ccv.5 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5ccv.5 ----
|
| 5ccv.8.A | RNA-directed RNA polymerase NS5
Crystal structure of full-length NS5 from dengue virus type 3 | 0.04 | | 18.75 | 0.17 | 673-867 | X-ray | 3.60 | monomer | 2 x ZN, 1 x SAH | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5ccv.8 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5ccv.8 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5ccv.8 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5ccv.8 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5ccv.8 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5ccv.8 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5ccv.8 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5ccv.8 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5ccv.8 --------------------------------IISRKDQRGSGQVGTYGLNTFTNMEAQLIRQ----MEGEG-VLSKADL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLR-----KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVF-- 5ccv.8 ENPHP--LEK-----K-----I---TQWLETKGVERLKRMAISGDDCVVKPIDD-----------RFANALLALNDMGKV
target ------MSEAKCWTETDLTKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIV-KT--------------- 5ccv.8 RKDIPQWQPSKGWHD----WQQVPFCSHHFHELIMKDGRKLVVPCRPQDELIGRARISQGAGWSLRETACLGKAYAQMWA
target --DGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH 5ccv.8 LMYFHRRDLRLASNAICSA-------------------------------------------------------------
target TVLQ 5ccv.8 ----
|
| 8fm9.1.M | RNA-directed RNA polymerase
Nodavirus RNA replication proto-crown, detergent-solubliized C12 multimer | 0.03 | | 14.38 | 0.16 | 539-702 | EM | 0.00 | homo-24-mer | | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 8fm9.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 8fm9.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 8fm9.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 8fm9.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 8fm9.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 8fm9.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 8fm9.1 ----------------------------------------------------------LIESFNKNEPGMKS-SRIISGF
target SIC-STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR-IMASLVL 8fm9.1 PDILFILKVSRYTLAYSDIVLHAEHNEHWYYPGRNPTEIADGVCEFVSDC-DAEVIETDFSNLDGRVSSWMQRNIAQKAM
target ARKHTTCCSLSHRFYRLANECAQVLSEMV------MCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDG 8fm9.1 VQ----AFRPEY-----RDEIISFMDTIINCPAKAKRFGFRYEPGVGVKSGSPTTTPHNTQYNGCVEFTA----------
target NKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNV 8fm9.1 --------------------------------------------------------------------------------
target FMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKH 8fm9.1 --------------------------------------------------------------------------------
target PNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 8fm9.1 ------------------------------------------------------------
|
| 7xd8.1.A | NS5
Crystal Structure of Dengue Virus Serotype 2 (DENV2) Polymerase Elongation Complex (Native Form) | 0.04 | | 17.93 | 0.16 | 673-846 | X-ray | 2.85 | monomer | 2 x ZN, 1 x G-G-A-U-A-U-A-A-U | HHblits | 0.29 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7xd8.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7xd8.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7xd8.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7xd8.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7xd8.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7xd8.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7xd8.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7xd8.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7xd8.1 --------------------------------IISRRDQRGSGQVVTYGLNTFTNMEAQLIR----QMEGEG--VFKSIQ
target RNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHF-SMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAK 7xd8.1 -HLTVT------EEIA-----VKNWLVRVGRERLSRMAISGDDCVVKPLDD-----------RFASALTALNDMGKVRKD
target --CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHP 7xd8.1 IQQWEPSRGWNDWTQVPFCSHHFHELIMKDGRVLVVPCRNQDELIGRARISQG---------------------------
target NQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7xd8.1 -----------------------------------------------------------
|
| 7d6n.1.A | Tick-borne encephalitis virus RNA-dependent RNA polymerase
Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase | 0.04 | | 19.01 | 0.15 | 675-846 | X-ray | 3.17 | homo-10-mer | 20 x ZN, 10 x MG | HHblits | 0.30 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 7d6n.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 7d6n.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 7d6n.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 7d6n.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 7d6n.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 7d6n.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 7d6n.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 7d6n.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 7d6n.1 ----------------------------------TRRDQRGSGQVVTYALNTLTNIKVQLIR----MMEGEGVI-EASDA
target RNLQHRLYECLYRNRDVDTDFVNEFY-AYLRKHFS-MMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEA- 7d6n.1 HNP-R-L----L---R-----VERWLRDHGEERLGRMLVSGDDCVVRPVDD-----------RFSRALYFLNDMAKTRKD
target -KCWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHP 7d6n.1 IGEWEHSVGFSNWEEVPFCSHHFHELVMKDGRALIVPCRDQDELVGRARVSPG---------------------------
target NQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 7d6n.1 -----------------------------------------------------------
|
| 5tfr.1.A | Genome polyprotein
Crystal structure of Zika Virus NS5 protein | 0.03 | | 16.08 | 0.15 | 672-846 | X-ray | 3.05 | monomer | 1 x SAH, 2 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5tfr.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5tfr.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5tfr.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5tfr.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5tfr.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5tfr.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5tfr.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5tfr.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5tfr.1 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5tfr.1 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPID-----------DRFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5tfr.1 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPG------------------------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5tfr.1 --------------------------------------------------------------
|
| 5tmh.1.A | Polyprotein
Structure of Zika virus NS5 | 0.03 | | 16.20 | 0.15 | 672-845 | X-ray | 3.28 | monomer | 1 x SAH, 2 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 5tmh.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 5tmh.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 5tmh.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 5tmh.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 5tmh.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 5tmh.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 5tmh.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 5tmh.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 5tmh.1 -------------------------------DIISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 5tmh.1 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPID-----------DRFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 5tmh.1 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSP-------------------------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 5tmh.1 --------------------------------------------------------------
|
| 6wcz.1.B | Non-structural protein 5
CryoEM structure of full-length ZIKV NS5-hSTAT2 complex | 0.03 | | 16.20 | 0.15 | 673-846 | EM | 0.00 | hetero-1-1-mer | 2 x ZN | HHblits | 0.28 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6wcz.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6wcz.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSL 6wcz.1 --------------------------------------------------------------------------------
target LMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTV 6wcz.1 --------------------------------------------------------------------------------
target FPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA 6wcz.1 --------------------------------------------------------------------------------
target LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYF 6wcz.1 --------------------------------------------------------------------------------
target DCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGV 6wcz.1 --------------------------------------------------------------------------------
target SICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLAR 6wcz.1 --------------------------------------------------------------------------------
target KHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYV 6wcz.1 --------------------------------IISRQDQRGSGQVVTYALNTFTNLVVQLIR----NMEAEEVL-EMQDL
target RNLQHRLYECLYRNRDVDTDFVNEFYAYLRKH-----FSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMS 6wcz.1 WLLRK-------P-EK-----V---TRWLQSNGWDRLKRMAVSGDDCVVKPID-----------DRFAHALRFLNDMGKV
target EAK--CWTETDL--TKGPHEFCSQHTMLVKQ-GDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLT 6wcz.1 RKDTQEWKPSTGWSNWEEVPFCSHHFNKLYLKDGRSIVVPCRHQDELIGRARVSPG------------------------
target KHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6wcz.1 --------------------------------------------------------------
|
| 6iii.1.A | UPF0061 protein YdiU
Crystal structure of an uncharacterized protein | 0.00 | | 28.21 | 0.04 | 185-223 | X-ray | 2.11 | monomer | 1 x 2PN, 1 x AMP, 2 x MG | HHblits | 0.34 |
target SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNY 6iii.1 --------------------------------------------------------------------------------
target QHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKK 6iii.1 --------------------------------------------------------------------------------
target DWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG-IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYS 6iii.1 ------------------------VVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFG----------------
target LLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFST 6iii.1 --------------------------------------------------------------------------------
target VFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVA 6iii.1 --------------------------------------------------------------------------------
target ALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKY 6iii.1 --------------------------------------------------------------------------------
target FDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAG 6iii.1 --------------------------------------------------------------------------------
target VSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLA 6iii.1 --------------------------------------------------------------------------------
target RKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKY 6iii.1 --------------------------------------------------------------------------------
target VRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKC 6iii.1 --------------------------------------------------------------------------------
target WTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYAD 6iii.1 --------------------------------------------------------------------------------
target VFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ 6iii.1 -----------------------------------------------------
|