A6ZY12 | SWISS-MODEL Repository

A6ZY12 (A6ZY12_YEAS7) Saccharomyces cerevisiae (strain YJM789) (Baker's yeast)

DNA-directed RNA polymerase subunit UniProtKB InterPro Interactive Modelling

110 aa; Sequence (Fasta) ; 10 identical sequences: Saccharomyces cerevisiae: G2WAF1, C8Z4W5, C7GTA4, Q04307, B3LGM2; Saccharomyces pastorianus: A0A6C1DPR8; Saccharomyces paradoxus: A0A8B8UNR8; Saccharomyces boulardii: A0A0L8VST0; Saccharomyces mikatae IFO 1815: A0AA35IXF3; Saccharomyces arboricola: J8Q6L4

It is possible new templates exist for this target since these models were created.

Available Structures

24 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Structure of yeast RNA Polymerase III PTC + NTPs	7z1o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-110	100	7×ZN; 1×MG; 2×1N7;
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Structure of yeast RNA Polymerase III Pre-Termination Complex (PTC)	7z1l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-110	100	7×ZN; 1×MG; 2×4QM;
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Structure of yeast RNA Polymerase III Elongation Complex (EC)	7z1m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-110	100	7×ZN; 1×MG; 2×4QM;
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Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.6 A (focus subunit AC40).	7z0h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q07163;	1-110	100	7×ZN; 2×MG;
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Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.9 A (focus subunit C11 terminal Zn…	7z30 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q07163;	1-110	100	7×ZN; 2×MG;
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Cryo-EM structure of yeast apo RNA polymerase III at 4.6 A	5fj9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-110	100.0	6×ZN;
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Cryo-EM structure of yeast RNA polymerase III at 4.7 A	5fja PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-110	100.0	6×ZN;
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Structure of yeast RNA Polymerase III-DNA-Ty1 integrase complex (Pol III-DNA-IN1) at 3.1 A	7z2z PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q07163;	1-109	100	7×ZN; 2×MG; 1×4QM;
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Structure of yeast RNA Polymerase III elongation complex at 3.3 A	8bws PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-55	100	6×ZN; 1×MG; 3×4QM;
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Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.7 A (focus subunit C11, no C11 C-t…	7z31 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q12414;	1-47	100	6×ZN; 1×MG;
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RNA Polymerase III - open DNA complex (OC-POL3).	6eu1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-44	100	6×ZN; 1×MG;
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Cryo-EM structure of the RNA Polymerase III-Maf1 complex	6tut PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P41910; P47076; Q04307;	1-43	100	7×ZN;
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Apo RNA Polymerase III - open conformation (oPOL3)	6eu2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-42	100	6×ZN; 1×MG;
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Yeast RNA polymerase III elongation complex	6cnf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-42	100	7×ZN;
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Yeast RNA polymerase III initial transcribing complex	6cnb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-42	100	7×ZN;
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Apo RNA Polymerase III - closed conformation (cPOL3)	6eu3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-42	100	6×ZN; 1×MG;
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Yeast RNA polymerase III open complex	6cnc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-42	100	7×ZN;
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Yeast RNA polymerase III natural open complex (nOC)	6cnd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-42	100	7×ZN;
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Cryo-EM structure of yeast RNA polymerase III elongation complex at 3. 9 A	5fj8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P32349; P32910; P35718; P36121; P40422; P47076; Q04307;	1-42	100	6×ZN;
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RNA Polymerase III open pre-initiation complex (OC-PIC)	6eu0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-41	100	7×ZN; 1×MG;
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RNA Polymerase III closed complex CC1.	6f42 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-34	100	7×ZN;
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RNA Polymerase III open complex	6f40 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-34	100	7×ZN;
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RNA Polymerase III closed complex CC2.	6f44 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-34	100	7×ZN;
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RNA Polymerase III initially transcribing complex	6f41 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P28000; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307;	1-34	100	7×ZN;
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4 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7z1m.1.I	monomer	0.64	1-110	2×ZN;	100.00
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8iue.1.I	monomer	0.55	1-108	1×ZN;	56.73
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7fjj.1.I	monomer	0.54	1-108	1×ZN;	56.73
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5fmf.1.K	monomer	0.53	1-110	2×ZN;	26.17
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

A6ZY12 (A6ZY12_YEAS7) Saccharomyces cerevisiae (strain YJM789) (Baker's yeast)

DNA-directed RNA polymerase subunit UniProtKBInterProInteractive Modelling

Available Structures

24 Experimental Structures

4 SWISS-MODEL models

Alignments

Background

Resolution

DNA-directed RNA polymerase subunit UniProtKB InterPro Interactive Modelling