P28000 (RPAC2_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
DNA-directed RNA polymerases I and III subunit RPAC2 UniProtKBInterProSTRINGInteractive Modelling
It is possible new templates exist for this target since these models were created.
Available Structures
61 Experimental Structures
Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
---|---|---|---|---|---|---|
RNA Polymerase III - open DNA complex (OC-POL3). |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; 1×MG; | |||
Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 3×SO4; 7×ZN; 1×MG; 1×MPD; | |||
Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; | |||
Structure of 14-subunit RNA polymerase I at 3.35 A resolution, crystal form C2-90 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; | |||
RNA Polymerase I Open Complex conformation 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 8×ZN; | |||
RNA Polymerase I Closed Conformation 1 (CC1) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | ||||
RNA Polymerase I Initial Transcribing Complex State 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 6×ZN; | |||
RNA Polymerase I Open Complex conformation 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 8×ZN; | |||
RNA Polymerase I Pre-initiation complex DNA opening intermediate 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 1×ZN; | |||
RNA polymerase I Initial Transcribing Complex State 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 7×ZN; | |||
RNA Polymerase I Closed Conformation 2 (CC2) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | ||||
RNA Polymerase I Pre-initiation complex DNA opening intermediate 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 1×ZN; | |||
RNA polymerase I Initial Transcribing Complex State 3 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 6×ZN; | |||
RNA polymerase I Initial Transcribing Complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 6×ZN; | |||
Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) with fully-… |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; | |||
RNA polymerase I pre-initiation complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 7×ZN; | |||
RNA Polymerase III open pre-initiation complex (OC-PIC) |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; 1×MG; | |||
Structure of yeast RNA Polymerase III PTC + NTPs |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 7×ZN; 1×MG; 2×1N7; | |||
Structure of yeast RNA Polymerase III Pre-Termination Complex (PTC) |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 7×ZN; 1×MG; 2×4QM; | |||
Structure of yeast RNA Polymerase III Delta C53-C37-C11 |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P32349; P32910; P35718; P40422; P47076; | 100 | 5×ZN; 1×MG; 2×1N7; | |||
Structure of yeast RNA Polymerase III Elongation Complex (EC) |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 7×ZN; 1×MG; 2×4QM; | |||
Cryo-EM structure of the RNA Polymerase III-Maf1 complex |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P41910; P47076; Q04307; | 100 | 7×ZN; | |||
Structure of RNA polymerase I at 2.8 A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; 1×SO4; | |||
RNA polymerase I structure with an alternative dimer hinge |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; | |||
Apo RNA Polymerase III - open conformation (oPOL3) |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; 1×MG; | |||
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 8×ZN; | |||
early intermediate RNA Polymerase I Pre-initiation complex - eiPIC |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 7×ZN; 1×MG; | |||
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 8×ZN; | |||
Monomeric RNA polymerase I at 4.9 A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; | |||
Structure of yeast RNA Polymerase III elongation complex at 3.3 A |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; 1×MG; 3×4QM; | |||
Yeast RNA polymerase III elongation complex |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
Yeast RNA polymerase III initial transcribing complex |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
Yeast RNA polymerase I elongation complex at 3.8A |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; 1×MG; 1×SO4; | |||
Apo RNA Polymerase III - closed conformation (cPOL3) |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; 1×MG; | |||
Yeast RNA polymerase III open complex |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
RNA polymerase I initially transcribing complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 7×ZN; 1×MG; 1×SO4; | |||
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; | 100 | 8×ZN; 5×SO4; 1×MG; | |||
RNA Polymerase III closed complex CC1. |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
Yeast RNA polymerase III natural open complex (nOC) |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; 1×MG; | |||
Free monomeric RNA polymerase I at 4.0A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; 1×SO4; | |||
Structure of yeast RNA Polymerase III-DNA-Ty1 integrase complex (Pol III-DNA-IN1) at 3.1 A |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q07163; | 100 | 7×ZN; 2×MG; 1×4QM; | |||
Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.6 A (focus subunit AC40). |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q07163; | 100 | 7×ZN; 2×MG; | |||
Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.9 A (focus subunit C11 terminal Zn… |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q07163; | 100 | 7×ZN; 2×MG; | |||
Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.7 A (focus subunit C11, no C11 C-t… |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; Q12414; | 100 | 6×ZN; 1×MG; | |||
RNA Polymerase III open complex |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
Cryo-EM structure of yeast RNA polymerase III elongation complex at 3. 9 A |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; | |||
RNA Polymerase III closed complex CC2. |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
RNA Polymerase III initially transcribing complex |
Heteromer P04051; P07703; P13393; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P29056; P32349; P32910; P35718; P36121; P40422; P46678; P47076; Q04307; | 100 | 7×ZN; | |||
Cryo-EM structure of yeast apo RNA polymerase III at 4.6 A |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; | |||
Cryo-EM structure of yeast RNA polymerase III at 4.7 A |
Heteromer P04051; P07703; P17890; P20434; P20435; P20436; P22139; P22276; P25441; P32349; P32910; P35718; P36121; P40422; P47076; Q04307; | 100 | 6×ZN; | |||
RNA polymerase I-Rrn3 complex at 4.8 A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P36070; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; | |||
RNA Polymerase I elongation complex with A49 tandem winged helix domain |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; | |||
RNA Polymerase I-tWH-Rrn3-DNA |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P36070; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; | |||
RNA Polymerase I elongation complex 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; | |||
RNA Polymerase I elongation complex 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 6×ZN; | |||
RNA Polymerase I open complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 7×ZN; | |||
Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P50106; | 100 | 1×MG; 6×ZN; 1×G2P; | |||
Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P47006; P50106; Q01080; | 100 | 1×MG; 6×ZN; 1×G2P; | |||
Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P50106; | 100 | 7×ZN; 1×MG; 1×G2P; | |||
Yeast apo RNA polymerase I* |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P32529; P40422; P46669; P50106; | 100 | 7×ZN; | |||
2 SWISS-MODEL models
Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
---|---|---|---|---|---|---|
7z1m.1.K | monomer | 0.78 | 100.00 | |||
8rbx.1.C | monomer | 0.54 | 15.91 | |||