SMTL ID : 5fmf.1

the P-lobe of RNA polymerase II pre-initiation complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 6.00 Å
Oligo State
hetero-oligomer
Ligands
2 x MG: MAGNESIUM ION(Non-covalent)
9 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Murakami, K. et al., Structure of an RNA Polymerase II Pre-Initiation Complex. Proc.Natl.Acad.Sci.USA (2015)
Release Date
2015-11-25
Peptides
DNA REPAIR HELICASE RAD25, SSL2: A
TRANSCRIPTION ELONGATION FACTOR S-II, DST1: B
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1: C
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2: D
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3: E
RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4: F
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5: G
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6: H
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7: I
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8: J
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9: K
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10: L
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11: M
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12: N
RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1: O
TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2: Q
TRANSCRIPTION INITIATION FACTOR IIB, SUA7: R
TATA-BOX-BINDING PROTEIN, TBP: S
TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1: T
TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2: U
RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1: W
TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2: X
RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2: Y
RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5: Z
DNA REPAIR HELICASE RAD3: 0
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
1
B
2
C
A
D
B
E
C
F
D
G
E
H
F
I
G
J
H
K
I
L
J
M
K
N
L
O
M
Q
O
R
P
S
Q
T
R
U
S
W
U
X
V
Y
W
Z
X
0
Y

DNA REPAIR HELICASE RAD25, SSL2

TRANSCRIPTION ELONGATION FACTOR S-II, DST1

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3

RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1, RPB5

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2, RPB6

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3, RPB8

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5, RPB10

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4, RPB12

RNA POLYMERASE II PRE-INITIATION COMPLEX, TOA1

TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2, TOA2

TRANSCRIPTION INITIATION FACTOR IIB, SUA7

TATA-BOX-BINDING PROTEIN, TBP

TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT ALPHA, TFA1

TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA, TFA2

RNA POLYMERASE II PRE-INITIATION COMPLEX, TFG1

TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA, TFG2

RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 2, TFB2

RNA POLYMERASE II TRANSCRIPTION FACTOR B SUBUNIT 5, TFB5

DNA REPAIR HELICASE RAD3

Related Entries With Identical Sequence

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