B3LIY5 (B3LIY5_YEAS1) Saccharomyces cerevisiae (strain RM11-1a) (Baker's yeast)

Ribosome biogenesis protein BRX1 UniProtKBInterProInteractive Modelling

291 aa; Sequence (Fasta) ; 3 identical sequences: Saccharomyces cerevisiae: N1NXN4, Q08235, A0A8H4FA39

Available Structures

18 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
7r7a
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		25-290
2×ZN;
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
7nac
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04031; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		25-290
2×ZN; 1×SAH;
Assess
Yeast nucleolar pre-60S ribosomal subunit (state 3)
6cb1
 Heteromer
P04456; P05737; P05740; P05743; P05744; P05745; P05748; P0C2H6; P0CX23; P0CX49; P0CX84; P10664; P10962; P14120; P17076; P26784; P35178; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P49167; P53136; P53261; P53927; P87262; Q02326; Q03532; Q04660; Q08235; Q12690; 		31-290
2×ZN;
Assess
Yeast nucleolar pre-60S ribosomal subunit (state 2)
6c0f
 Heteromer
P05737; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P35178; P36080; P36105; P38061; P38779; P38789; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q04660; Q06511; Q07915; Q08235; Q12522; Q12690; 		31-290
3×ZN;
Assess
Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
8e5t
 Heteromer
P05737; P05744; P05745; P05748; P0CX23; P0CX49; P10664; P10962; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P39744; P40693; P53261; P53927; Q02326; Q03532; Q04660; Q08235; Q12176; Q12690; 		31-263
33×MG; 1×ZN;
Assess
Structure of the Brx1 and Ebp2 complex
5z1g
 Heteromer
P36049; Q08235; 		26-255
1×SO4;
Assess
Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)
5z3g
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P38805; P40693; P49166; P53136; P53261; P53927; Q02326; Q03532; Q08235; Q12522; Q12690; 		26-255
Assess
State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr…
6em5
 Heteromer
O14455; P04456; P05737; P05738; P05740; P05743; P05744; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P10962; P14120; P14126; P17076; P25582; P26784; P33201; P35178; P36049; P36105; P38061; P38202; P38779; P38805; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53136; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		28-239
Assess
Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
7ohr
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38779; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53261; P53927; P87262; Q02326; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		28-239
1×ZN;
Assess
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
6elz
 Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		28-239
1×ZN;
Assess
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down…
7ohv
 Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38779; P40007; P40078; P40693; P49166; P49167; P53261; P53927; Q02326; Q02892; Q03532; Q04660; Q07915; Q08235; Q12024; Q12522; Q12690; 		28-239
1×ZN;
Assess
State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region
7r6k
 Heteromer
P05745; P05748; P17076; P25582; P36049; P39744; P40078; P40991; P43586; P87262; Q04031; Q04660; Q07896; Q08235; Q08962; 		25-216
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model
7r7c
 Heteromer
P0CX43; P25582; P36049; P40078; P40991; P43586; Q02892; Q04660; Q08235; Q08962; 		43-219
Assess
Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae
7ohs
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36105; P38061; P38779; P38805; P40007; P40078; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q04660; Q07915; Q08235; Q12522; Q12690; 		28-191
2×ZN;
Assess
State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr…
6em4
 Heteromer
O14455; P05737; P05740; P05743; P05744; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q03532; Q04660; Q07915; Q08235; Q12522; Q12690; 		28-191
Assess
State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr…
6em3
 Heteromer
O14455; P05737; P05740; P05743; P05744; P05748; P0CX23; P0CX49; P0CX84; P10664; P10962; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q03532; Q04660; Q08235; Q12690; 		28-191
Assess
State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
6em1
 Heteromer
O14455; P05737; P05738; P05740; P05743; P05744; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36049; P36105; P38061; P38202; P38779; P38805; P40007; P40010; P40078; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q04660; Q07915; Q08235; Q12522; Q12690; 		28-191
2×ZN;
Assess
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut dow…
7ohw
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36049; P36105; P38061; P38779; P38805; P40007; P40078; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q04660; Q08235; Q12522; Q12690; 		29-191
1×ZN;
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7nac.1.Dmonomer0.7825-290
100.00
Assess