C7GVQ7 | SWISS-MODEL Repository

C7GVQ7 (C7GVQ7_YEAS2) Saccharomyces cerevisiae (strain JAY291) (Baker's yeast)

General transcription and DNA repair factor IIH subunit TFB5 UniProtKB InterPro Interactive Modelling

72 aa; Sequence (Fasta) ; 3 identical sequences: Saccharomyces cerevisiae: N1P691, C8Z4Z7, Q3E7C1

It is possible new templates exist for this target since these models were created.

Available Structures

31 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Consensus map of PICdeltaTFIIK form2	8umh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P07273; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q04673; Q12004; Q3E7C1;	2-67	100	15×ZN; 2×MG; 1×SF4;
Download Compare Structure Assessment
consensus map of PICdeltaTFIIK form1	8umi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P07273; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q04673; Q12004; Q3E7C1;	2-67	100	1×SF4; 15×ZN; 2×MG;
Download Compare Structure Assessment
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH	5oqj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	16×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR	5oqm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12343; Q3E7C1; Q99278;	2-67	100	16×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
Structure of a yeast closed complex with distorted DNA (CCdist)	6gym PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	1×SF4; 16×ZN; 1×MG;
Download Compare Structure Assessment
Composite map of PIC_delta_TFIIK form2	8uoq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P07273; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q04673; Q12004; Q3E7C1;	2-67	100	15×ZN; 2×MG; 1×SF4;
Download Compare Structure Assessment
Composite map of PICdeltaTFIIK form1	8uot PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P07273; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q04673; Q12004; Q3E7C1;	2-67	100	1×SF4; 15×ZN; 2×MG;
Download Compare Structure Assessment
Nucleotide Excision Repair complex TFIIH Rad4-33	7m2u PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P06839; P14736; P32776; Q00578; Q02939; Q04231; Q04673; Q12004; Q3E7C1;	2-67	100	1×SF4; 5×ZN; 2×CA;
Download Compare Structure Assessment
Structure of TFIIH/Rad4-Rad23-Rad33/DNA in DNA opening	7k04 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P06839; P14736; P32776; Q00578; Q02939; Q04231; Q04673; Q12004; Q3E7C1;	2-67	100	2×CA; 1×SF4; 5×ZN;
Download Compare Structure Assessment
RNA polymerase II initially transcribing complex (ITC)	7ml4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	15×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
General transcription factor TFIIH (weak binding)	7ml3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P06839; P32776; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	7×ZN; 1×SF4;
Download Compare Structure Assessment
RNA polymerase II pre-initiation complex (PIC2)	7ml1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	19×ZN; 1×SF4; 1×MG;
Download Compare Structure Assessment
RNA polymerase II pre-initiation complex (PIC3)	7ml2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	17×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
Structure of TFIIH in TFIIH/Rad4-Rad23-Rad33 DNA opening complex	7k01 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P06839; P32776; Q00578; Q02939; Q04673; Q12004; Q3E7C1;	2-67	100	5×ZN; 1×SF4;
Download Compare Structure Assessment
RNA polymerase II pre-initiation complex (PIC1)	7ml0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-67	100	17×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with initial transcription bubble	7o4i PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 17×ZN; 1×BEF; 2×MG; 1×ADP;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex (consensus)	7o4j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 17×ZN; 1×BEF; 2×MG; 1×ADP;
Download Compare Structure Assessment
Yeast TFIIH in the contracted state within the pre-initiation complex	7o4k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P20433; P20435; P32776; P34087; P36100; P36145; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 10×ZN; 1×BEF; 1×MG; 1×ADP;
Download Compare Structure Assessment
Yeast TFIIH in the expanded state within the pre-initiation complex	7o4l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P20433; P20435; P32776; P34087; P36100; P36145; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 11×ZN; 1×BEF; 1×MG; 1×ADP;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator	8cen PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12321; Q12343; Q3E7C1; Q99278;	2-66	100	1×SF4; 17×ZN; 1×MG;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleoso…	8ceo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02281; P04050; P06839; P06897; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12321; Q12343; Q3E7C1; Q99278;	2-66	100	1×SF4; 17×ZN; 1×MG;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with closed distorted promoter DNA	7o73 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 17×ZN; 1×BEF; 2×MG; 1×ADP;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA	7o72 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 17×ZN; 1×BEF; 2×MG; 1×ADP;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA	7o75 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	1×SF4; 17×ZN; 1×BEF; 2×MG; 1×ADP;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A)	7zs9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02281; P04050; P06839; P06897; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	17×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP (comple…	7zsa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02281; P04050; P06839; P06897; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	17×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP, comple…	7zsb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02281; P04050; P06839; P06897; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P36145; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;	2-66	100	17×ZN; 1×MG; 1×SF4;
Download Compare Structure Assessment
Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2	3dgp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q02939; Q3E7C1;	2-64	100
Download Compare Structure Assessment
Mediator-RNA Polymerase II Pre-Initiation Complex	5sva PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P33308; P34087; P34162; P35189; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q08278; Q12343; Q3E7C1; Q99278;	2-64	100	8×ZN; 1×MG;
Download Compare Structure Assessment
the P-lobe of RNA polymerase II pre-initiation complex	5fmf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P07273; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P34087; P36100; P36145; P38902; P40422; P41895; P41896; Q00578; Q02939; Q3E7C1;	2-64	100	2×MG; 9×ZN;
Download Compare Structure Assessment
Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2	3dom PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q02939; Q3E7C1;	2-59	100
Download Compare Structure Assessment

1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	5oqm.1.1	monomer	0.78	2-67		100.00
	Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

C7GVQ7 (C7GVQ7_YEAS2) Saccharomyces cerevisiae (strain JAY291) (Baker's yeast)

General transcription and DNA repair factor IIH subunit TFB5 UniProtKBInterProInteractive Modelling

Available Structures

31 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

General transcription and DNA repair factor IIH subunit TFB5 UniProtKB InterPro Interactive Modelling