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C8Z762 (C8Z762_YEAS8) Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) (Baker'syeast)

Rpl34ap UniProtKBInterProInteractive Modelling

121 aa; Sequence (Fasta) ; 7 identical sequences: Saccharomyces cerevisiae: N1P3D8, G2WCU3, P87262, A6ZR09, B3LS71; Saccharomyces pastorianus: A0A6C1DQR8; Saccharomyces boulardii: A0A0L8VS06

Available Structures

69 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
NPC-trapped pre-60S particle Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P33201; P34232; P36105; P38061; P38202; P38861; P39715; P40078; P47019; P49166; P49167; P53742; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08687; Q12522; Q12690; Q99257;
2-115
237×MG;
Assess
Yeast RQC complex in state F Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690;
2-113
13×MG;ZN;
Assess
State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr… Heteromer
O14455; P04456; P05737; P05738; P05740; P05743; P05744; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P10962; P14120; P14126; P17076; P25582; P26784; P33201; P35178; P36049; P36105; P38061; P38202; P38779; P38805; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53136; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;
2-113
Assess
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1) Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P40024; P41805; P49166; P49167; P87262; Q02326; Q02753; Q04311; Q12522; Q12690; Q3E757;
2-113
ZN;
Assess
Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P33201; P36105; P38061; P38202; P40078; P49166; P49167; P53742; P87262; Q02326; Q02753; Q02892; Q07915; Q08004; Q12522; Q12690;
2-113
GTP;MG;
Assess
Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P33201; P36105; P38061; P38202; P38861; P49166; P49167; P87262; Q02326; Q02753; Q02892; Q07915; Q08004; Q12522; Q12690;
2-113
Assess
CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P49166; P49167; P53313; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q12019; Q12522; Q12690;
2-113
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model Heteromer
P04456; P05740; P05749; P0C2H6; P0C2H8; P0CX41; P0CX82; P14120; P14126; P17076; P25582; P25808; P39744; P40693; P49166; P49167; P53261; P87262; Q02892; Q04031; Q04660; Q07896; Q07915; Q12024;
2-113
ZN;
Assess
Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 A… Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40078; P40693; P49166; P49167; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q07915; Q08746; Q12080; Q12522; Q12690;
2-113
GTP;MG;ZN;
Assess
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P47019; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12080; Q12522; Q12690;
2-113
81×MG;B3P;ZN;GDP;K;
Assess
State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36105; P38061; P38202; P38779; P40010; P40078; P40693; P49166; P49167; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q07915; Q12080; Q12522; Q12690;
2-113
MG;ZN;
Assess
Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q06504; Q12387; Q12690; Q3E757;
2-113
206×MG;ZN;
Assess
Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q07915; Q08746; Q12080; Q12522; Q12690;
2-113
MG;ZN;
Assess
Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q06504; Q12387; Q12690; Q3E757;
2-113
206×MG;ZN;
Assess
Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P40010; P40078; P49166; P49167; P53188; P53742; P87262; Q02326; Q02753; Q02892; Q07915; Q08746; Q12522; Q12690;
2-113
MG;ZN;
Assess
Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20 Heteromer
A0A6A5PUL8; A0A6A5PUZ5; A0A6A5PWR1; A0A6A5PY83; A0A6A5Q0W8; A0A6A5Q1M9; A0A6A5Q3W0; A0A6A5Q627; A0A6A5Q7I9; A7H9Z6; P02406; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P14120; P17076; P26784; P36105; P49166; P87262; Q02326; Q02753; Q12690;
2-113
ZN;
Assess
Yeast RQC complex in state G Heteromer
A0A6A5PUZ5; A0A6A5PWR1; A0A6A5Q0W8; A0A6A5Q275; A0A6A5Q627; P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P17076; P23301; P26784; P36105; P38061; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12532; Q12690;
2-113
13×MG;ZN;SPD;
Assess
Arx1 pre-60S particle. Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P40693; P49166; P49167; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q12522; Q12690;
2-113
Assess
Context-specific inhibition of eukaryotic translation by macrolide antibiotics Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12690; Q3E757;
2-113
TEL;
Assess
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1) Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q04311; Q12522; Q12690; Q3E757;
2-113
ZN;
Assess
Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12522; Q12690; Q3E757;
2-113
23×UNK;MG;
Assess
Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1 Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P49166; P49167; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;
2-113
Assess
Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38344; P41805; P49166; P49167; P87262; Q02326; Q02753; Q03862; Q12690;
2-113
280×MG;ZN;
Assess
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P47019; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12080; Q12522; Q12690;
2-113
81×MG;B3P;ZN;GDP;GTP;K;
Assess
Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 Heteromer
A0A6A5PUL8; A0A6A5PUZ5; A0A6A5PWR1; A0A6A5PY83; A0A6A5Q0W8; A0A6A5Q1M9; A0A6A5Q3W0; A0A6A5Q627; A0A6A5Q7I9; P02406; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P14120; P17076; P26784; P36105; P49166; P87262; Q02326; Q02753; Q12690;
2-113
ZN;
Assess
Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38801; P40010; P40078; P47047; P49166; P49167; P53188; P53261; P53742; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12149; Q12522; Q12690;
2-113
ZN;GTP;MG;
Assess
Structure of pre-60S particle bound to DRG1(AFG2). Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P32794; P33201; P36105; P38061; P38202; P38861; P40078; P49166; P49167; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q12522; Q12690;
2-113
11×AGS;MG;
Assess
Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position Heteromer
A0A6A5PUZ5; A0A6A5PWR1; A0A6A5Q0W8; A0A6A5Q275; A0A6A5Q627; A0A8H4F709; P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P17076; P23301; P26784; P36105; P38061; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12690;
2-113
13×MG;ZN;SPD;
Assess
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppr… Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P47019; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12080; Q12522; Q12690;
2-113
81×MG;B3P;ZN;GDP;K;
Assess
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922 Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P40010; P40078; P47019; P49166; P49167; P53742; P87262; Q02326; Q02753; Q02892; Q07915; Q08004; Q08746; Q12522; Q12690;
2-113
GDP;MG;
Assess
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strai… Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P47019; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12080; Q12522; Q12690;
2-113
B3P; 81×MG;ZN;GDP;ALF;K;
Assess
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;
2-113
ZN;
Assess
Yeast RQC complex in state E Heteromer
A0A6A5PUL8; A0A6A5PUZ5; A0A6A5PWR1; A0A6A5Q0W8; A0A6A5Q275; A0A6A5Q3W0; A0A6A5Q627; A0A6A5Q7I9; A0A8H4F709; A0A8H8UMB4; P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX82; P0CX84; P14120; P17076; P23301; P26784; P36105; P38061; P49166; P87262; Q02753; Q04781; Q12522; Q12690;
2-113
13×MG;ZN;SPD;
Assess
Yeast RQC complex in state D Heteromer
A0A6A5PUZ5; A0A6A5PWR1; A0A6A5Q0W8; A0A6A5Q627; A0A8H4F709; P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P17076; P26784; P36105; P38061; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12690;
2-113
13×MG;ZN;SPD;
Assess
pre-60S State NE2 (TAP-Flag-Nop53) Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26784; P33201; P36105; P38061; P38202; P38779; P40010; P40078; P40693; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q07915; Q08004; Q12080; Q12522; Q12690;
2-113
ZN;
Assess
Yeast RQC complex in state with the RING domain of Ltn1 in the IN position Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q04781; Q12532; Q12690;
2-113
13×MG;ZN;SPD;
Assess
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;
2-113
ZN;
Assess
Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 2… Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12080; Q12522; Q12690;
2-113
ZN;GTP;MG;
Assess
State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 local model Heteromer
P04456; P05740; P05749; P0C2H6; P0C2H8; P0CX82; P14120; P14126; P17076; P25582; P25808; P39744; P40693; P49166; P49167; P53261; P87262; Q02892; Q04660; Q07896; Q07915; Q12024;
2-113
ZN;
Assess
Cryo-EM structure of the ribosome-NatA complex Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P07347; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P12945; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q08689; Q12690;
2-113
3HE;
Assess
Yeast Vms1-60S ribosomal subunit complex (post-state) Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q04311; Q12522; Q12690; Q3E757;
2-113
ZN;
Assess
Cryo-em structure of eukaryotic pre-60S ribosomal subunits Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P38779; P40010; P40078; P40693; P49166; P49167; P53188; P53261; P53742; P53927; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q08746; Q12080; Q12522; Q12690;
2-113
ZN;GTP;MG;
Assess
Yeast RQC complex in state H Heteromer
A0A6A5PUZ5; A0A6A5PWR1; A0A6A5Q0W8; A0A6A5Q275; A0A6A5Q627; A0A8H4F709; P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05739; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P17076; P23301; P26784; P36105; P38061; P49166; P49167; P87262; Q02753; Q04781; Q12522; Q12690;
2-113
13×MG;ZN;
Assess
pre-60S State NE1 (TAP-Flag-Nop53) Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36105; P38061; P38202; P38779; P40010; P40078; P40693; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q07915; Q12080; Q12522; Q12690;
2-113
Assess
Subunit joining exposes nascent pre-40S rRNA for processing and quality control Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12690; Q3E757;
2-113
Assess
Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P23301; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12690;
2-113
3HE;
Assess
Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P33201; P36105; P38061; P38202; P38861; P49166; P49167; P87262; Q02326; Q02753; Q02892; Q07915; Q08004; Q12522; Q12690;
2-113
GTP;MG;
Assess
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04031; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;
2-113
ZN;SAH;
Assess
Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis… Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P41805; P49166; P49167; P53145; P87262; Q02326; Q02753; Q12522; Q12690;
2-113
160×MG;K;GNP;
Assess
Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02753; Q03862; Q12690;
2-113
280×MG;ZN;
Assess
Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis… Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12690;
2-113
86×MG;K;
Assess
Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1 Heteromer
P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P0CX86; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12690;
2-113
ZN;
Assess
Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P49166; P49167; P53145; P87262; Q02256; Q02326; Q02753; Q12522; Q12690;
2-110
Assess
Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P49166; P49167; P87262; Q02256; Q02326; Q02753; Q12522; Q12690;
2-110
Assess
Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P41805; P49166; P49167; P53145; P87262; Q02256; Q02326; Q02753; Q12522; Q12690;
2-110
Assess
Rix1-Rea1 pre-60S particle - full composite structure Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P38202; P38803; P38883; P40010; P40078; P47019; P49166; P49167; P53188; P53313; P53742; P53877; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q12019; Q12522; Q12690;
2-108
ZN;GTP;MG;
Assess
Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement) Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P38061; P38202; P38803; P40010; P40078; P47019; P49166; P49167; P53188; P53313; P53742; P87262; Q02326; Q02753; Q02892; Q03862; Q07915; Q08004; Q12522; Q12690;
2-108
ZN;GTP;MG;
Assess
Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38779; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53261; P53927; P87262; Q02326; Q02892; Q03532; Q04660; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690;
9-113
ZN;
Assess
Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 A… Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25382; P26321; P26784; P33201; P36105; P36160; P38061; P38202; P40078; P49166; P49167; P53742; P87262; Q02326; Q02753; Q02892; Q07915; Q08746; Q12522; Q12690;
2-105
GTP;MG;ZN;
Assess
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;
2-104
ZN;
Assess
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P41805; P49166; P49167; P53145; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;
2-104
ZN;
Assess
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38344; P38861; P49166; P49167; P53145; P87262; Q02256; Q02326; Q02753; Q03862; Q12522; Q12690;
2-104
10×ZN;
Assess
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P49166; P49167; P53145; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;
2-104
ZN;
Assess
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P41805; P49166; P49167; P53145; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;
2-104
ZN;
Assess
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles Heteromer
P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P49166; P49167; P53145; P87262; Q02256; Q02326; Q02753; Q06709; Q12522; Q12690;
2-104
ZN;
Assess
Yeast nucleolar pre-60S ribosomal subunit (state 3) Heteromer
P04456; P05737; P05740; P05743; P05744; P05745; P05748; P0C2H6; P0CX23; P0CX49; P0CX84; P10664; P10962; P14120; P17076; P26784; P35178; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P49167; P53136; P53261; P53927; P87262; Q02326; Q03532; Q04660; Q08235; Q12690;
2-102
ZN;
Assess
Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae Heteromer
P02406; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26784; P33201; P36105; P38061; P40078; P49166; P49167; P53742; P87262; Q02326; Q02753; Q02892; Q07915; Q12522; Q12690;
2-102
MG;
Assess
State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model Heteromer
P04456; P05745; P05748; P0C2H6; P0CX84; P17076; P25582; P38779; P40007; P40693; P53261; P53927; P87262; Q03532; Q04660; Q12690;
31-79
Assess
State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region Heteromer
P05745; P05748; P17076; P25582; P36049; P39744; P40078; P40991; P43586; P87262; Q04031; Q04660; Q07896; Q08235; Q08962;
97-113
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
5h4p.1.7monomer0.802-113
100.00
Assess