SMTL ID : 8aaf.1

Yeast RQC complex in state G

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
13 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
7 x ZN: ZINC ION(Non-covalent)
1 x SPD: SPERMIDINE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Tesina, P. et al., Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. Mol.Cell (2023)
Release Date
2023-03-08
Peptides
60S ribosomal protein L15-A: A
60S ribosomal protein L16-A: B
60S ribosomal protein L17-A: C
60S ribosomal protein L18-A: D
60S ribosomal protein L19-A: E
60S ribosomal protein L20-A: F
60S ribosomal protein L21-A: G
60S ribosomal protein L22-A: H
60S ribosomal protein L23-A: I
60S ribosomal protein L24-A: J
60S ribosomal protein L25: K
60S ribosomal protein L26-A: L
60S ribosomal protein L27-A: M
60S ribosomal protein L28: N
60S ribosomal protein L29: O
60S ribosomal protein L30: P
60S ribosomal protein L31-A: Q
60S ribosomal protein L32: R
60S ribosomal protein L33-A: S
60S ribosomal protein L34-A: T
60S ribosomal protein L35-A: U
60S ribosomal protein L36-A: V
60S ribosomal protein L37-A: W
60S ribosomal protein L38: X
60S ribosomal protein L39: Y
Ubiquitin-60S ribosomal protein L40: Z
60S ribosomal protein L42-A: 0
60S ribosomal protein L43-A: 1
60S ribosomal protein L41-A: 2
60S ribosomal protein L2-A: 6
60S ribosomal protein L3: 7
60S ribosomal protein L4-A: 8
60S ribosomal protein L5: 9
60S ribosomal protein L6-B: a
60S ribosomal protein L7-A: b
60S ribosomal protein L8-A: c
60S ribosomal protein L9-A: d
60S ribosomal protein L10: e
60S ribosomal protein L11-A: f
60S ribosomal protein L13-A: g
60S ribosomal protein L14-A: h
Ribosome quality control complex subunit 2: i
E3 ubiquitin-protein ligase listerin: j
Eukaryotic translation initiation factor 6: k
Eukaryotic translation initiation factor 5A-1: l
60S ribosomal protein L1-A: m
60S ribosomal protein L12-B: p
60S acidic ribosomal protein P0: q
CAT-tailed nascent peptide: r
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
V
V
W
W
X
X
Y
Y
Z
Z
0
b
1
c
2
d
6
j
7
k
8
l
9
m
a
n
b
o
c
p
d
q
e
r
f
s
g
t
h
u
i
a
j
e
k
g
l
v
m
w
p
z
q
0
r
1

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18-A

60S ribosomal protein L19-A

60S ribosomal protein L20-A

60S ribosomal protein L21-A

60S ribosomal protein L22-A

60S ribosomal protein L23-A

60S ribosomal protein L24-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L27-A

60S ribosomal protein L28

60S ribosomal protein L29

60S ribosomal protein L30

60S ribosomal protein L31-A

60S ribosomal protein L32

60S ribosomal protein L33-A

60S ribosomal protein L34-A

60S ribosomal protein L35-A

60S ribosomal protein L36-A

60S ribosomal protein L37-A

60S ribosomal protein L38

60S ribosomal protein L39

Ubiquitin-60S ribosomal protein L40

60S ribosomal protein L42-A

60S ribosomal protein L43-A

60S ribosomal protein L41-A

60S ribosomal protein L2-A

60S ribosomal protein L3

60S ribosomal protein L4-A

60S ribosomal protein L5

60S ribosomal protein L6-B

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

60S ribosomal protein L10

60S ribosomal protein L11-A

60S ribosomal protein L13-A

60S ribosomal protein L14-A

Ribosome quality control complex subunit 2

E3 ubiquitin-protein ligase listerin

Eukaryotic translation initiation factor 6

Eukaryotic translation initiation factor 5A-1

60S ribosomal protein L1-A

60S ribosomal protein L12-B

60S acidic ribosomal protein P0

CAT-tailed nascent peptide

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