H0GIR8 (H0GIR8_SACCK) Saccharomyces cerevisiae x Saccharomyces kudriavzevii (strain VIN7)(Yeast)

DNA-directed RNA polymerase subunit UniProtKBInterProInteractive Modelling

125 aa; Sequence (Fasta) ; 10 identical sequences: Saccharomyces cerevisiae: N1P1L1, G2WH68, C8ZBL1, C7GME0, P32529, A0A6A5PT23, A6ZQ22, B3LQF1; Saccharomyces pastorianus: A0A6C1EAK0; Saccharomyces boulardii: A0A0L8VNV4

Available Structures

36 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Structure of RNA polymerase I at 2.8 A resolution
4c2m
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN; 1×SO4;
Assess
Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100
4c3i
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
3×SO4; 7×ZN; 1×MG; 1×MPD;
Assess
Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93
4c3h
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN;
Assess
Structure of 14-subunit RNA polymerase I at 3.35 A resolution, crystal form C2-90
4c3j
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN;
Assess
RNA polymerase I structure with an alternative dimer hinge
4ym7
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN;
Assess
RNA polymerase I pre-initiation complex
5oa1
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
7×ZN;
Assess
Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP
6hlq
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P50106; 		2-125
7×ZN; 1×MG; 1×G2P;
Assess
RNA Polymerase I Pre-initiation complex DNA opening intermediate 1
6rrd
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
1×ZN;
Assess
RNA Polymerase I Closed Conformation 1 (CC1)
6rqh
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
Assess
RNA Polymerase I open complex
5m5w
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN;
Assess
RNA Polymerase I Open Complex conformation 2
6rwe
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
8×ZN;
Assess
RNA Polymerase I Closed Conformation 2 (CC2)
6rql
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
Assess
RNA Polymerase I Open Complex conformation 1
6ruo
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
8×ZN;
Assess
RNA Polymerase I Pre-initiation complex DNA opening intermediate 2
6rui
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-125
1×ZN;
Assess
Free monomeric RNA polymerase I at 4.0A resolution
5m3m
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN; 1×SO4;
Assess
Yeast apo RNA polymerase I*
6hls
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P50106; 		2-125
7×ZN;
Assess
RNA polymerase I-Rrn3 complex at 4.8 A resolution
5g5l
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P36070; P40422; P46669; P47006; P50106; Q01080; 		2-125
7×ZN;
Assess
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III)
5n5y
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-124
8×ZN; 5×SO4; 1×MG;
Assess
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I)
5n60
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-124
8×ZN;
Assess
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II)
5n5z
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-124
8×ZN;
Assess
early intermediate RNA Polymerase I Pre-initiation complex - eiPIC
6tps
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-74
7×ZN; 1×MG;
Assess
Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused)
6hlr
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P50106; 		2-67
1×MG; 6×ZN; 1×G2P;
Assess
Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP
6hko
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-67
1×MG; 6×ZN; 1×G2P;
Assess
RNA Polymerase I Initial Transcribing Complex State 1
5w64
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-66
6×ZN;
Assess
Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) with fully-…
6h68
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-66
6×ZN;
Assess
RNA polymerase I Initial Transcribing Complex
5w5y
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-66
6×ZN;
Assess
RNA polymerase I Initial Transcribing Complex State 2
5w65
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-66
7×ZN;
Assess
RNA polymerase I Initial Transcribing Complex State 3
5w66
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-66
6×ZN;
Assess
RNA Polymerase I elongation complex with A49 tandem winged helix domain
5m64
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-65
6×ZN;
Assess
RNA Polymerase I-tWH-Rrn3-DNA
6rqt
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P36070; P40422; P46669; P47006; P50106; Q01080; 		2-65
6×ZN;
Assess
RNA Polymerase I elongation complex 2
5m5y
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-65
6×ZN;
Assess
RNA Polymerase I elongation complex 1
5m5x
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-65
6×ZN;
Assess
Monomeric RNA polymerase I at 4.9 A resolution
5lmx
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-65
6×ZN;
Assess
Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD)
6h67
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-64
6×ZN; 1×MG;
Assess
RNA polymerase I initially transcribing complex
5n61
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q01080; Q04712; 		2-64
7×ZN; 1×MG; 1×SO4;
Assess
Yeast RNA polymerase I elongation complex at 3.8A
5m3f
 Heteromer
P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; Q01080; 		2-64
6×ZN; 1×MG; 1×SO4;
Assess

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
4c3h.1.Imonomer0.682-125
2×ZN;100.00
Assess
1k83.1.Gmonomer0.505-125
1×ZN;20.72
Assess