O00560 (SDCB1_HUMAN) Homo sapiens (Human)
Syntenin-1 UniProtKBInterProSTRINGInteractive Modelling
298 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3);
3 identical sequences: Pan troglodytes: G2HGC6, A0A6D2WRI0; Pan paniscus: A0A2R9BRG1
It is possible new templates exist for this target since these models were created.
Available Structures
55 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide |
Heteromer P31431; | 100 | 2×SO4; 2×EDO; | |||
| Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fr… |
Heteromer O75084; | 100 | 1×ACT; 2×GOL; 1×IP2; | |||
| Crystal structure of the complex of the PDZ tandem of syntenin with an interleukin 5 receptor alpha… |
Heteromer Q01344; | 100 | 4×ACT; | |||
| Crystal structure of the PDZ tandem of human syntenin with syndecan peptide |
Heteromer P31431; | 100 | ||||
| Crystal structure of the complex of PDZ2 of syntenin with an interleukin 5 receptor alpha peptide. |
Heteromer Q01344; | 100 | 4×CO; 4×SO4; | |||
| Crystal structure of the complex of PDZ2 of syntenin with a syndecan-4 peptide. |
Heteromer P31431; | 100 | 3×SO4; | |||
| Crystal structure of the PDZ tandem of human syntenin in complex with TNEFYF peptide | homo-2-mer | 100 | 1×BEZ; | |||
| Crystal structure of the PDZ tandem of human syntenin in complex with TNEYKV peptide | homo-2-mer | 100 | 1×BEZ; | |||
| CRYSTAL STRUCTURE OF THE PDZ TANDEM OF HUMAN SYNTENIN | homo-2-mer | 100 | ||||
| Crystal structure of the PDZ tandem of syntenin in complex with fragment C58 | homo-2-mer | 100 | 3×PO4; 2×JVK; 1×ACT; | |||
| Crystal structure of the PDZ tandem of syntenin in complex with compound SYNTi | homo-2-mer | 100 | 2×LLV; | |||
| Crystal structure of the PDZ tandem of syntenin in complex with fragment F13 | homo-2-mer | 100 | 2×K7Z; 2×ACT; | |||
| Crystal structure of the PDZ tandem of syntenin in complex with compound 95 | homo-2-mer | 100 | 2×LN2; | |||
| Crystal structure of the PDZ tandem of syntenin in complex with compound 29 | homo-2-mer | 100 | 2×LL6; 1×GOL; | |||
| Crystal structure of the PDZ tandem of syntenin in complex with fragment E5 | homo-2-mer | 100 | 2×LKV; | |||
| NMR fragment-based screening against the two PDZ do-mains of MDA-9 | homo-2-mer | 100 | 2×P1Z; 4×SO4; 4×GOL; | |||
| The PDZ domains of human SDCBP | monomer | 100 | 2×EDO; 1×SO4; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z45636695 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with POB0093 | monomer | 100 | 1×YEF; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z57127349 | monomer | 100 | 1×SZB; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z27782662 | monomer | 100 | 1×YG0; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with POB0008 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1650168321 | monomer | 100 | 2×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1509711879 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z198195770 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1328078283 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z57744712 | monomer | 100 | 1×YEB; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z729726784 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z26968795 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z56772132 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z228589380 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z235449082 | monomer | 100 | 2×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z3006151474 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z291279160 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1429867185 | monomer | 100 | 1×VVP; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z763030030 | monomer | 100 | 1×WJA; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z32367954 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z839706072 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z2204875953 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z169675004 | monomer | 100 | 1×YDX; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z48847594 | monomer | 100 | 1×O0J; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1198269757 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1454310449 | monomer | 100 | 1×UQS; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z54615640 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z18197050 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z730649594 | monomer | 100 | 1×NUM; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1954800564 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z254580486 | monomer | 100 | 1×YDG; 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with NCL-00024671 | monomer | 100 | 1×EDO; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z56767614 | monomer | 100 | 1×EDO; 1×SO4; | |||
| SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z1148165337 | monomer | 100 | 1×YG5; 1×EDO; | |||
| Crystal structure of the PDZ tandem of human syntenin in complex with TNEFAF peptide | monomer | 100 | 1×BEZ; | |||
| Crystal structure of the PDZ tandem of human syntenin in complex with TNEYYV peptide | monomer | 100 | 1×BEZ; | |||
| Ultrahigh resolution Crystal Structure of syntenin PDZ2 | monomer | 100 | 1×CL; | |||
| CRYSTAL STRUCTURE ANALYSIS OF THE SECOND PDZ DOMAIN OF SYNTENIN | monomer | 100 | 1×O; | |||
6 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 8blu.1.A | monomer | 0.84 | 100.00 | |||
| 8blv.1.A | monomer | 0.80 | 1×ALA; | 100.00 | ||
| 4ynn.1.A | monomer | 0.56 | 21.50 | |||
| 7xs2.1.A | monomer | 0.52 | 19.80 | |||
| 3otp.1.B | monomer | 0.52 | 20.90 | |||
| 3otp.1.C | monomer | 0.50 | 20.90 | |||
11 SWISS-MODEL models built on isoform sequence
| Isoform | Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|---|
| Isoform 2 | 5g1d.1.A | homo-2-mer | 0.84 | 1×ALA; | 95.85 | ||
| Isoform 2 | 3pv5.1.I | homo-12-mer | 0.53 | 20.69 | |||
| Isoform 2 | 7xs2.1.A | monomer | 0.51 | 19.21 | |||
| Isoform 2 | 4fln.1.A | monomer | 0.50 | 13.43 | |||
| Isoform 3 | 8blu.3.A | monomer | 0.84 | 3×GLY; | 100.00 | ||
| Isoform 3 | 8blv.1.A | monomer | 0.81 | 1×ALA; | 100.00 | ||
| Isoform 3 | 4ynn.1.A | monomer | 0.55 | 21.50 | |||
| Isoform 3 | 3otp.1.B | monomer | 0.52 | 20.90 | |||
| Isoform 3 | 7xs2.1.A | monomer | 0.51 | 19.80 | |||
| Isoform 3 | 3otp.1.C | monomer | 0.51 | 20.90 | |||
| Isoform 3 | 5il9.1.G | monomer | 0.50 | 15.42 | |||