P17109 (MEND_ECOLI) Escherichia coli (strain K12)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase UniProtKBInterProSTRINGInteractive Modelling
556 aa; Sequence (Fasta) ;
9 identical sequences: Escherichia coli MS 85-1: A0AAN3SER3; Shigella sonnei: A0AAE5K3Z9; Shigella dysenteriae: A0AAN4CM10; Escherichia coli: C4ZUA7, E0IY48, J7QFW2, A0A140N580; Escherichia coli O9:H4: A8A2D2; Escherichia coli: B1X8X8
It is possible new templates exist for this target since these models were created.
Available Structures
16 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| ThDP-Mn2+ complex of R413K variant of EcMenD soaked with 2-ketoglutarate for 5 min | homo-4-mer | 99.82 | 4×TD6; 4×MN; 16×FMT; | |||
| ThDP-Mn2+ complex of R395K variant of EcMenD soaked with 2-ketoglutarate for 5 min | homo-4-mer | 99.82 | 4×TD6; 4×MG; 15×FMT; 1×GOL; | |||
| ThDP-Mn2+ complex of R395A variant of EcMenD soaked with 2-ketoglutarate for 5 min | homo-4-mer | 99.82 | 4×TD6; 4×MG; 4×FMT; 2×GOL; | |||
| EcMenD-ThDP-Mn2+ complex structure soaked with 2-ketoglutarate for 2 min | homo-2-mer | 100 | 2×TD6; 2×MN; 4×MG; 3×GOL; 7×EDO; 13×FMT; | |||
| EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 21 s | homo-2-mer | 100 | 2×TD6; 2×MN; 3×GOL; | |||
| EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2 min and soaked with isochorismate for 7 … | homo-2-mer | 100 | 2×TD6; 2×MN; 2×GOL; | |||
| ThDP-Mn2+ complex of R413A variant of EcMenD soaked with 2-ketoglutarate for 35 min | homo-2-mer | 99.82 | 2×TD5; 2×MN; 2×GOL; 2×EDO; | |||
| EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2 min and isochorismate for 13 min | homo-2-mer | 100 | 2×TPP; 2×MN; 2×GOL; 2×FMT; | |||
| EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 15 min | homo-2-mer | 100 | 2×TD6; 2×MN; 4×GOL; 2×FMT; | |||
| Crystal structure of menaquinone synthesis protein MenD from E. coli in complex with oxoglutarate | homo-2-mer | 99.81 | 2×AKG; 2×MG; 37×NA; 2×CL; 6×GOL; | |||
| EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2min then soaked with isochorismate for 2 … | homo-2-mer | 100 | 2×TD6; 2×MN; | |||
| EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 1.5 h | homo-2-mer | 100 | 2×TD6; 2×MN; 2×GOL; | |||
| Crystal structure of E.coli MenD, 2-succinyl-5-enolpyruvyl-6-hydroxy- 3-cyclohexadiene-1-carboxylat… | homo-2-mer | 100.0 | 2×TPP; 2×MN; | |||
| Crystal structure of menaquinone synthesis protein MenD from E. coli in complex with ThDP | homo-2-mer | 99.82 | 3×NA; 2×TPP; 2×MG; | |||
| Crystal structure of menD from E.coli | homo-2-mer | 99.81 | ||||
| Crystal structure of E.coli MenD, 2-succinyl-5-enolpyruvyl-6-hydroxy- 3-cyclohexadiene-1-carboxylat… | homo-2-mer | 100 | 2×TPP; 2×MN; 7×CL; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5ejm.1.A | homo-2-mer | 0.95 | 2×TD5; 2×MN; | 99.82 | ||