P18074 (ERCC2_HUMAN) Homo sapiens (Human)

General transcription and DNA repair factor IIH helicase subunit XPD UniProtKBInterProSTRINGInteractive Modelling

760 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

38 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Initial DNA-lesion (Cy5) binding by XPC and TFIIH
8ebs
 Heteromer
P19447; P32780; P41208; P54727; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-760
1001×SF4; 5×ZN; 2×CA;
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Structure Assessment
Initial DNA-lesion (AP) binding by XPC and TFIIH complex2
8ebw
 Heteromer
P19447; P32780; P41208; P54727; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-760
1001×SF4; 5×ZN; 2×CA;
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Structure Assessment
Cryo-EM structure of the human TFIIH core complex
6nmi
 Heteromer
P19447; P32780; P51948; Q13888; Q13889; Q6ZYL4; Q92759; 		1-760
96.451×SF4; 6×ZN;
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Structure Assessment
RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W)
8byq
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P02281; P06897; P13984; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; P62799; P84233; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		1-760
1001×SF4; 16×ZN; 1×MG;
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Structure Assessment
Structure of the human Mediator-bound transcription pre-initiation complex
7lbm
 Heteromer
A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P19387; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7; 		1-760
1002×MG; 16×ZN; 1×SF4;
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Structure Assessment
Initial DNA-lesion (AP) binding by XPC and TFIIH complex 1
8ebv
 Heteromer
P19447; P32780; P41208; P54727; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-760
1001×SF4; 5×ZN; 2×CA;
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Structure Assessment
p53-bound TFIID-based holo PIC on HDM2 promoter
7egc
 Heteromer
A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P49848; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-734
10016×ZN; 1×SF4; 1×MG;
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Structure Assessment
Structure of the human apo TFIIH
6o9m
 Heteromer
P19447; P32780; P51948; Q13888; Q13889; Q6ZYL4; Q92759; 		11-742
1001×SF4; 6×ZN;
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Structure Assessment
Human holo-PIC in the closed state
6o9l
 Heteromer
O15514; P13984; P19387; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		11-742
1002×MG; 17×ZN; 1×SF4;
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Structure Assessment
XPC release from Core7-XPA-DNA (Cy5)
8ebu
 Heteromer
P19447; P23025; P32780; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-730
100.01×SF4; 6×ZN;
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Structure Assessment
XPC release from Core7-XPA-DNA (AP)
8eby
 Heteromer
P19447; P23025; P32780; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-730
100.01×SF4; 6×ZN;
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Structure Assessment
XPA repositioning Core7 of TFIIH relative to XPC-DNA lesion (AP)
8ebx
 Heteromer
P19447; P23025; P32780; P41208; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-730
100.01×SF4; 6×ZN; 2×CA;
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Structure Assessment
XPA repositioning Core7 of TFIIH relative to XPC-DNA lesion (Cy5)
8ebt
 Heteromer
P19447; P23025; P32780; P41208; Q01831; Q13888; Q13889; Q6ZYL4; Q92759; 		1-730
100.01×SF4; 6×ZN; 2×CA;
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Structure Assessment
Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positione…
8was
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure Assessment
Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positione…
8wao
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure Assessment
Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positione…
8war
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure Assessment
Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positione…
8wap
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure Assessment
Structure of the core TFIIH-XPA-DNA complex
6ro4
 Heteromer
P19447; P23025; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 6×ZN;
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Structure Assessment
Core TFIIH-XPA-DNA complex with modelled p62 subunit
7ad8
 Heteromer
P19447; P23025; P32780; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 6×ZN;
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Structure Assessment
Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positione…
8wal
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×W0F; 1×MG;
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Structure Assessment
Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positione…
8wan
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure Assessment
Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positione…
8wak
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×W0F; 1×MG;
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Structure Assessment
Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positione…
8waq
 Heteromer
A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure Assessment
TFIID-based holo PIC on SCP promoter
7egb
 Heteromer
A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P49848; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15542; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759; 		1-728
100.017×ZN; 1×SF4; 1×MG;
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Structure Assessment
RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)
8bvw
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P02281; P06897; P13984; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; P62799; P84233; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 17×ZN; 1×MG;
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Structure Assessment
TFIIH in a pre-translocated state (without ADP-BeF3)
7nvw
 Heteromer
P19447; P29083; P32780; P51948; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 7×ZN;
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Structure Assessment
TFIIH in a post-translocated state (with ADP-BeF3)
7nvx
 Heteromer
P19447; P29083; P32780; P51948; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 7×ZN; 1×ADP; 1×MG; 1×BEF;
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Structure Assessment
RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position
7nvy
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P19447; P20226; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 17×ZN; 1×MG;
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Structure Assessment
Human Mediator with RNA Polymerase II Pre-initiation complex
7nvr
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; A0JLT2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O43513; O60244; O75586; P13984; P19447; P20226; P29083; P29084; P32780; P35269; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q92759; Q96G25; Q96HR3; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9P086; Q9Y3C7; 		1-728
100.01×SF4; 18×ZN; 1×MG;
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Structure Assessment
RNA polymerase II pre-initiation complex with open promoter DNA
7nw0
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P19447; P20226; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 15×ZN; 1×ADP; 2×MG; 1×BEF;
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Structure Assessment
RNA polymerase II pre-initiation complex with closed promoter DNA in distal position
7nvz
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P13984; P19447; P20226; P29083; P29084; P32780; P35269; P51948; P52655; P52657; P60899; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		1-728
100.01×SF4; 17×ZN; 1×MG;
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Structure Assessment
The cryo-EM structure of human TFIIH
5of4
 Heteromer
P19447; Q13888; Q13889; Q6ZYL4; Q92759; 		11-734
1001×SF4;
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Structure Assessment
Human holo-PIC in the initial transcribing state
5iy8
 Heteromer
O15514; P13984; P19387; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		15-726
100.02×MG; 11×ZN;
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Structure Assessment
Human holo-PIC in the initial transcribing state (no IIS)
5iy9
 Heteromer
O15514; P13984; P19387; P19388; P19447; P20226; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		15-726
100.02×MG; 10×ZN;
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Structure Assessment
Human holo-PIC in the closed state
5iy6
 Heteromer
O15514; P13984; P19387; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		15-726
100.02×MG; 11×ZN;
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Structure Assessment
Human holo-PIC in the open state
5iy7
 Heteromer
O15514; P13984; P19387; P19388; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759; 		15-726
100.02×MG; 11×ZN;
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Structure Assessment
Human core TFIIH bound to DNA within the PIC
5ivw
 Heteromer
P19447; Q13888; Q13889; Q6ZYL4; Q92759; 		15-726
100.0
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Structure Assessment
Helicase domain complex
6tun
 Heteromer
P51948; 		246-439
100.01×CL;
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Structure Assessment

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8ebs.1.Bmonomer0.781-760
1×SF4;100.00
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Model report
Structure Assessment
5ivw.1.Bmonomer0.5515-726
100.00
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Model report
Structure Assessment

2 SWISS-MODEL models built on isoform sequence

IsoformTemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 26nmi.1.Bmonomer0.751-399
1×SF4;90.73
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Model report
Structure Assessment
Isoform 25ivw.1.Bmonomer0.531-399
97.49
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Model report
Structure Assessment