P27150 | SWISS-MODEL Repository

P27150 (RL1_THETH) Thermus thermophilus

Large ribosomal subunit protein uL1 UniProtKB InterPro Interactive Modelling

229 aa; Sequence (Fasta) ; 2 identical sequences: Thermus thermophilus JL-18: H9ZP06; Thermus thermophilus: Q72GV9

Available Structures

30 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Complex of 70S ribosome with cognate tRNA-Tyr in the P-site	4wzd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY8; P0DOY9; P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	2-229	100.0	699×MG; 3×ZN;
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X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric…	6n1d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;	2-229	99.12	141×MG; 1×SF4;
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Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-si…	4wu1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY8; P0DOY9; P17291; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	2-229	100.0	708×MG; 3×ZN;
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70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and t…	4v9k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;	2-229	99.12	1×GNP; 1×MG;
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70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, …	4v9l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;	2-229	99.12	1×FUA; 1×GDP; 1×MG;
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70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and …	4v9j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;	2-229	99.12	1×GNP; 1×MG;
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70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, …	4v9m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;	2-229	99.12	1×FUA; 1×GDP;
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70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.	4v4z PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY8; P0DOY9; P17291; P24321; P27151; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60558; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; P80382; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP6; Q5SLP8; Q9LCY4; Q9Z9H5;	2-229	100
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Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA …	4v4x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY8; P17291; P24321; P27151; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60558; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; P80382; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP6; Q5SLP8; Q9LCY4; Q9Z9H5;	2-229	100
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Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalg…	4v4y PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY8; P0DOY9; P17291; P24321; P27151; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60558; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; P80382; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP6; Q5SLP8; Q9LCY4; Q9Z9H5;	2-229	100
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Structure of ribosome bound to cofactor at 3.8 angstrom resolution	5imq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P24321; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60558; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; P80382; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKA7; Q5SKU1; Q5SLP6; Q5SLP8; Q8VVE3; Q9LCY4; Q9Z9H5;	2-229	100	1×GCP;
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Structure of ribosome bound to cofactor at 5.7 angstrom resolution	5imr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P24321; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60558; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; P80382; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKA7; Q5SKU1; Q5SLP6; Q5SLP8; Q8VVE3; Q9LCY4; Q9Z9H5;	2-229	100	1×GCP;
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Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-…	5ibb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	4-229	100.0	736×MG; 1×SPE; 1×SF4; 2×ZN;
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Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-…	5ib7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	4-228	100.0	695×MG; 1×PAR; 1×SF4; 2×ZN;
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Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with…	5ib8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	4-228	100.0	723×MG; 1×SF4; 2×ZN;
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Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus the…	5j8b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKA7; Q5SKU1; Q5SLP6; Q5SLP8; Q5SLQ0; Q5SLQ1; Q8VVE3; Q9Z9H5;	4-227	100.0	919×MG; 6×ZN; 1×SF4; 1×GCP;
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Crystal structure of 70S ribosome with thrS operator and tRNAs.	4v4p PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P60405; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHP3; Q5SHQ5; Q5SHQ6; Q5SIH3; Q5SJ76; Q5SJH3; Q5SLP8; Q5SLQ0; Q9Z9H5;	6-229	100.0
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Complex of 70S ribosome with tRNA-fMet and mRNA	4wzo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P17291; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	8-229	100.0	576×MG; 3×ZN;
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Crystal structure of mutant ribosomal protein M218L TthL1 in complex with 80nt 23S RNA from Thermus…	4qvi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1-229	99.56	1×GLC; 4×SO4; 4×ACT; 1×MES;
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Ribosomal protein L1 from Thermus thermophilus with substitution Thr217Ala	4f9t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	99.56	3×MPD; 1×MRD; 10×SO4;
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Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus…	3umy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	99.56	2×CL; 5×SO4; 1×NA; 4×MG;
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Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus	3u4m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	100	2×SO4; 7×MLI; 5×MG; 2×CL; 5×NA;
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Crystal structure of mutant ribosomal protein G219V TthL1 in complex with 80nt 23S RNA from Thermus…	4qg3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	99.56	5×SO4; 8×IPA; 4×BME; 1×URE;
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Crystal structure of mutant ribosomal protein T217V TthL1 in complex with 80nt 23S RNA from Thermus…	3u56 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	99.56	11×MG; 1×MLI;
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Structure of ribosomal protein L1-mRNA complex at 2.1 resolution.	2hw8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	99.56	1×MG; 1×K; 1×BU1;
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The structure of the complex between the first domain of L1 protein from Thermus thermophilus and m…	2vpl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	100	1×K;
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The structure of a ribosomal protein L1 in complex with mRNA	1zho PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-229	100	1×K;
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RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE	1ad2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	6-229	99.55	3×SO4; 1×HG; 1×MRD;
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Mutant ribosomal protein l1 from thermus thermophilus with threonine 217 replaced by valine	4reo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	9-229	99.55	4×SO4; 2×MPD; 3×GLY;
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Crystal structure of mutant ribosomal protein G219V TthL1	4qgb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	14-229	99.54	1×CL; 1×ACT;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	3u4m.1.A	monomer	0.77	2-229	1×MG;	100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P27150 (RL1_THETH) Thermus thermophilus

Large ribosomal subunit protein uL1 UniProtKBInterProInteractive Modelling

Available Structures

30 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Large ribosomal subunit protein uL1 UniProtKB InterPro Interactive Modelling