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P36145 (T2EB_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Transcription initiation factor IIE subunit beta UniProtKBInterProSTRINGInteractive Modelling

328 aa; Sequence (Fasta) ; 9 identical sequences: Saccharomyces cerevisiae: N1P2R3, G2WI90, C8ZCM5, C7GX77, A0A6A5PS93, A7A022; Saccharomyces pastorianus: A0A6C1DVT9; Saccharomyces boulardii: A0A0L8VLQ6; Saccharomyces cerevisiae x Saccharomyces kudriavzevii: H0GJN2

Available Structures

24 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Yeast RNA polymerase II transcription pre-initiation complex with initial transcription bubble Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
101-327
SF4; 17×ZN;BEF;MG;ADP;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP (comple… Heteromer
P02281; P04050; P06839; P06897; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
17×ZN;MG;SF4;
Assess
Yeast RNA polymerase II transcription pre-initiation complex (consensus) Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
SF4; 17×ZN;BEF;MG;ADP;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
SF4; 17×ZN;BEF;MG;ADP;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP, comple… Heteromer
P02281; P04050; P06839; P06897; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
17×ZN;MG;SF4;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator Heteromer
A0A6A5PRZ0; G4XSG8; P04050; P06839; P08518; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P34087; P36100; P38902; P40422; P41896; Q00578;
106-327
SF4; 17×ZN;MG;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with closed distorted promoter DNA Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
SF4; 17×ZN;BEF;MG;ADP;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A) Heteromer
P02281; P04050; P06839; P06897; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
17×ZN;MG;SF4;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
106-327
SF4; 17×ZN;BEF;MG;ADP;
Assess
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleoso… Heteromer
A0A6A5PPQ0; A0A6A5PRZ0; A0A6A5Q1T4; A0A6A5Q217; A0A6A5Q2S0; A0A6A5Q2T8; A0A6A5Q2X3; A0A6A5Q3S8; A0A6A5Q418; A0A6A5Q608; A0A6A5Q7U4; A0A6L0ZMK2; A0A6V8RKA4; A0A7I9BTI9; A0A8H4BU46; A0A8H4BW51; A0A8H4C0I9; A0A8H4C0R2; A0A8H4C1B0; A0A8H4C1U9; A0A8H4F9X3; A0A8H8ULN4; A0A8H8UMZ6; G4XSG8; P04050; P06839; P08518; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32570; P34087; P34162; P36100; P38902; P40422; P41896; P62799; P84233; Q00578; Q6AZJ8;
106-327
SF4; 17×ZN;MG;
Assess
RNA polymerase II pre-initiation complex (PIC1) Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
123-283
17×ZN;MG;SF4;
Assess
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
123-283
16×ZN;MG;SF4;
Assess
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR Heteromer
P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12343; Q3E7C1; Q99278;
123-283
16×ZN;MG;SF4;
Assess
RNA polymerase II pre-initiation complex (PIC3) Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
123-283
17×ZN;MG;SF4;
Assess
Structure of a yeast closed complex with distorted DNA (core CCdist) Heteromer
P04050; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P34087; P36100; P38902; P40422; P41895; P41896;
123-283
10×ZN;MG;
Assess
Structure of a yeast closed complex with distorted DNA (CCdist) Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
123-283
SF4; 16×ZN;MG;
Assess
RNA polymerase II pre-initiation complex (PIC2) Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
123-283
19×ZN;SF4;MG;
Assess
Transcription initiation complex structures elucidate DNA opening (OC) Heteromer
P04050; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P34087; P36100; P38902; P40422; P41895; P41896;
123-280
10×ZN;MG;
Assess
Transcription initiation complex structures elucidate DNA opening (CC) Heteromer
P04050; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P34087; P36100; P38902; P40422; P41895; P41896;
123-280
10×ZN;MG;
Assess
RNA polymerase II initially transcribing complex (ITC) Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P32776; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
123-272
15×ZN;MG;SF4;
Assess
Yeast TFIIH in the contracted state within the pre-initiation complex Heteromer
P04050; P06839; P08518; P20433; P20435; P32776; P34087; P36100; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
181-327
SF4; 10×ZN;BEF;MG;ADP;
Assess
Yeast TFIIH in the expanded state within the pre-initiation complex Heteromer
P04050; P06839; P08518; P20433; P20435; P32776; P34087; P36100; Q00578; Q02939; Q03290; Q04673; Q12004; Q3E7C1;
181-327
SF4; 11×ZN;BEF;MG;ADP;
Assess
Mediator-RNA Polymerase II Pre-Initiation Complex Heteromer
P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P33308; P34087; P34162; P35189; P36100; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q08278; Q12343; Q3E7C1; Q99278;
125-250
ZN;MG;
Assess
the P-lobe of RNA polymerase II pre-initiation complex Heteromer
P04050; P06839; P07273; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32773; P32774; P34087; P36100; P38902; P40422; P41895; P41896; Q00578; Q02939; Q3E7C1;
125-247
MG;ZN;
Assess

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7o4j.1.3monomer0.65106-327
100.00
Assess
5sva.1.8monomer0.54125-250
100.00
Assess