P78527 (PRKDC_HUMAN) Homo sapiens (Human)

DNA-dependent protein kinase catalytic subunit UniProtKBInterProSTRINGInteractive Modelling

4128 aa; Sequence (Fasta) ; (Isoform 2; )

Sequence Features

 6A -> S (in dbSNP:rs8177999) VAR_019179 dbSNP
 263K -> N (in a lung adenocarcinoma sample; somatic mutation; dbSNP:rs758032015) VAR_041602 dbSNP
 333M -> I (in dbSNP:rs8178017) VAR_019180 dbSNP
 420V -> I (in dbSNP:rs55925466) VAR_041603 dbSNP
 500G -> S (in a metastatic melanoma sample; somatic mutation) VAR_041604
 605T -> S (in dbSNP:rs8178033) VAR_019181 dbSNP
 649F -> L (in dbSNP:rs55811715) VAR_041605 dbSNP
 680I -> M (in dbSNP:rs8178040) VAR_019182 dbSNP
 695P -> S (in dbSNP:rs8178046) VAR_019183 dbSNP
 1071N -> S (in dbSNP:rs8178070) VAR_019184 dbSNP
 1136R -> H (in a colorectal adenocarcinoma sample; somatic mutation; dbSNP:rs781401034) VAR_041606 dbSNP
 1190L -> V (in dbSNP:rs34598508) VAR_041607 dbSNP
 1237A -> T (in dbSNP:rs191531119) VAR_041608 dbSNP
 1279L -> F VAR_041609
 1314G -> V (in dbSNP:rs8178090) VAR_019185 dbSNP
 1447R -> M (in a lung squamous cell carcinoma sample; somatic mutation) VAR_041610
 1588D -> V (in dbSNP:rs8178104) VAR_019186 dbSNP
 1603Q -> H (in dbSNP:rs8178106) VAR_019187 dbSNP
 1619A -> G (in dbSNP:rs56182356) VAR_041611 dbSNP
 1680A -> V (in a metastatic melanoma sample; somatic mutation; dbSNP:rs55735910) VAR_041612 dbSNP
 2023S -> P (in dbSNP:rs56042895) VAR_041613 dbSNP
 2095A -> V (in dbSNP:rs8178147) VAR_019188 dbSNP
 2598R -> Q (in dbSNP:rs55923149) VAR_041614 dbSNP
 2702K -> E (in dbSNP:rs8178178) VAR_019189 dbSNP
 2810S -> N (in a metastatic melanoma sample; somatic mutation) VAR_041615
 2899R -> C (in dbSNP:rs4278157) VAR_019190 dbSNP
 2941G -> A (in a lung neuroendocrine carcinoma sample; somatic mutation) VAR_041616
 3062L -> R (in IMD26; shows increased long palindromic (P)-nucleotide stretches in the immunoglobulin coding joints indicating a defect in hairpin opening and insufficient DCLRE1C activation; dbSNP:rs587777685) VAR_072569 dbSNP
 3085E -> D (in dbSNP:rs56135402) VAR_041617 dbSNP
 3149G -> D (in dbSNP:rs8178208) VAR_019191 dbSNP
 3198T -> S (in dbSNP:rs55793951) VAR_041618 dbSNP
 3201P -> S (in dbSNP:rs8178216) VAR_019192 dbSNP
 3404G -> E (in dbSNP:rs8178225) VAR_019193 dbSNP
 3434I -> T (in dbSNP:rs7830743) VAR_019194 dbSNP
 3459N -> S (in dbSNP:rs8178228) VAR_019195 dbSNP
 3562L -> M (in dbSNP:rs8178232) VAR_019196 dbSNP
 3574A -> V (in IMD26; shows impaired function in response to irradiation and a less severe defect in V(D)J end-joining suggesting that the missense mutation retained some functional capacity; consistent with a loss of function mutation; dbSNP:rs587777686) VAR_072570 dbSNP
 3584L -> F (in dbSNP:rs55866966) VAR_041619 dbSNP
 3702P -> L (in dbSNP:rs8178236) VAR_050534 dbSNP
 3800L -> I (in dbSNP:rs56216442) VAR_041620 dbSNP
 3836P -> L (in dbSNP:rs8178245) VAR_019197 dbSNP
 3932M -> V (in dbSNP:rs8178248) VAR_019198 dbSNP
 3936G -> S (in dbSNP:rs55670423) VAR_041621 dbSNP
 3937V -> M (in dbSNP:rs56090750) VAR_041622 dbSNP
 2020-2021Cleavage; by caspase-3
 1816-2202NUC194
IPR012582PF08163
 3023-3470PIK-related kinase, FAT
IPR003151PF02259
 3749-4014Phosphatidylinositol 3-/4-kinase, catalytic domain
IPR000403PF00454
 4098-4128FATC domain
IPR003152PF02260

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Cryo-EM structure of Human DNA-PK Holoenzyme Heteromer
P12956; P13010;
5y3r10-4128
Crystal Structure of Human DNA-dependent Protein Kinase Catalytic Subunit (DNA-PKcs) Heteromer
5luq10-4127
Cryo-EM structure of DNAPKcsmonomer 5w1r8-4127

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
2monomer-4.926c1s.1.A3724-3940
31.41
2monomer-4.796ocu.1.A3724-3940
32.80