P78527 (PRKDC_HUMAN) Homo sapiens (Human)
DNA-dependent protein kinase catalytic subunit UniProtKBInterProSTRINGInteractive Modelling
4128 aa; Sequence (Fasta) ; (Isoform 2)
It is possible new templates exist for this target since these models were created.
Available Structures
40 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| DNA-PK complex of DNA end processing |
Heteromer P12956; P13010; Q96SD1; | 100.0 | 3×MG; 1×ATP; 1×IHP; 1×ZN; | |||
| Cryo-EM structure of the basal state of the Artemis:DNA-PKcs complex (see COMPND 13/14) |
Heteromer Q96SD1; | 100.0 | ||||
| NHEJ Long-range synaptic complex |
Heteromer P12956; P13010; P49917; Q13426; Q9H9Q4; | 100.0 | 2×ADP; | |||
| Dimeric complex of DNA-PKcs |
Heteromer | 100.0 | ||||
| NHEJ Long-range complex with PAXX |
Heteromer P12956; P13010; P49917; Q13426; Q9BUH6; Q9H9Q4; | 100.0 | 2×ATP; | |||
| NHEJ Long-range complex with ATP |
Heteromer P12956; P13010; P49917; Q13426; Q9BUH6; Q9H9Q4; | 100.0 | 2×MG; 2×ATP; | |||
| CryoEM structure of DNA-PK complex VIII |
Heteromer P13010; | 100.0 | 1×MG; 1×ATP; | |||
| CryoEM structure of inactivated-form DNA-PK (Complex III) |
Heteromer P12956; P13010; | 100.0 | ||||
| CryoEM structure of inactivated-form DNA-PK (Complex IV) |
Heteromer P12956; P13010; | 100.0 | ||||
| CryoEM structure of inactivated-form DNA-PK (Complex V) |
Heteromer P12956; P13010; | 100.0 | ||||
| Cryo-EM structure of activated-form DNA-PK (complex VI) |
Heteromer P12956; P13010; | 100.0 | ||||
| Telomeric RAP1:DNA-PK complex |
Heteromer P12956; P13010; Q9NYB0; | 100.0 | ||||
| DNA-PK in the active state |
Heteromer P12956; P13010; | 100.0 | 1×1IX; | |||
| CryoEM structure of DNA-PK complex VII |
Heteromer P12956; P13010; | 100.0 | 1×ATP; 1×IHP; | |||
| DNA-PK in the intermediate state |
Heteromer P12956; P13010; | 100.0 | 1×1IX; | |||
| Cryo-EM structure of DNA-PKcs:Ku80ct194 |
Heteromer P13010; | 100.0 | ||||
| Cryo-EM structure of DNA-PK dimer |
Heteromer P12956; P13010; | 100.0 | ||||
| Cryo-EM structure of NHEJ super-complex (monomer) |
Heteromer P12956; P13010; P49917; Q13426; Q9H9Q4; | 100.0 | ||||
| Cryo-EM structure of Human DNA-PK Holoenzyme |
Heteromer P12956; P13010; | 100.0 | ||||
| Cryo-EM structure of NHEJ supercomplex(trimer) |
Heteromer P12956; P13010; P49917; Q13426; Q9H9Q4; | 100.0 | ||||
| DNA-PK XLF mediated dimer bound to PAXX |
Heteromer P12956; P13010; P49917; Q13426; Q9BUH6; Q9H9Q4; | 100.0 | ||||
| DNA-PK Ku80 mediated dimer bound to PAXX and XLF |
Heteromer P12956; P13010; P49917; Q13426; Q9BUH6; Q9H9Q4; | 100.0 | ||||
| DNA-PK Ku80 mediated dimer bound to PAXX |
Heteromer P12956; P13010; P49917; Q13426; Q9BUH6; | 100.0 | ||||
| Cryo-EM structure of DNA-PK monomer |
Heteromer P12956; P13010; | 100.0 | ||||
| Cryo-EM structure of NHEJ super-complex (dimer) |
Heteromer P12956; P13010; P49917; Q13426; Q9H9Q4; | 100.0 | ||||
| Crystal Structure of Human DNA-dependent Protein Kinase Catalytic Subunit (DNA-PKcs) |
Heteromer | 98.28 | ||||
| CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex II) | monomer | 100.0 | ||||
| CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex I) | monomer | 100.0 | ||||
| Cryo-EM structure of DNA-PKcs in complex with NU7441 | monomer | 100.0 | 1×2R4; | |||
| Cryo-EM structure of DNA-PKcs (State 2) | monomer | 100.0 | ||||
| DNA-PKcs in complex with ATPgammaS-Mg | monomer | 100.0 | 1×AGS; 2×MG; | |||
| DNA-PKcs in complex with wortmannin | monomer | 100.0 | 1×KWT; | |||
| DNA-PKcs in complex with AZD7648 | monomer | 100.0 | 1×MBW; | |||
| DNA-PKcs in complex with M3814 | monomer | 100.0 | 1×1IX; | |||
| Cryo-EM structure of DNA-PKcs (State 3) | monomer | 100.0 | ||||
| Cryo-EM structure of DNA-PKcs (State 1) | monomer | 100.0 | ||||
| Cryo-EM structure of DNA-PKcs:DNA | monomer | 100.0 | ||||
| Cryo-EM structure of DNAPKcs | monomer | 100.0 | ||||
| CryoEM structure of inactivated-form FATKIN domain of DNA-PK | monomer | 100.0 | ||||
| CryoEM structure of activated-form FATKIN domain of DNA-PK | monomer | 100.0 | ||||
3 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 7lt3.1.C | monomer | 0.65 | 1×ADP; | 100.00 | ||
| 7k0y.1.A | monomer | 0.65 | 100.00 | |||
| 8bot.1.N | monomer | 0.57 | 100.00 | |||
4 SWISS-MODEL models built on isoform sequence
| Isoform | Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|---|
| Isoform 2 | 7otv.1.A | monomer | 0.67 | 100.00 | |||
| Isoform 2 | 7nfc.1.D | monomer | 0.63 | 100.00 | |||
| Isoform 2 | 6zhe.1.D | monomer | 0.61 | 100.00 | |||
| Isoform 2 | 4ezl.1.A | monomer | 0.50 | 31.94 | |||