Q13137 | SWISS-MODEL Repository

Q13137 (CACO2_HUMAN) Homo sapiens (Human)

Calcium-binding and coiled-coil domain-containing protein 2 UniProtKB InterPro STRING Interactive Modelling

446 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5)

Available Structures

10 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
NDP52 in complex with LC3C	3vvw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9BXW4;	21-137	100.0
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crystal structure of NDP52 SKICH domain in complex with RB1CC1 coiled-coil domain	7eaa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q8TDY2;	10-126	100.0
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Crystal structure of NDP52 SKICH region in complex with NAP1	5z7l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9H6S1;	17-126	100	4×GOL;
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Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin	4xkl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P62987;	417-446	100	1×GOL; 2×ACT; 1×ZN;
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The crystal structure of Galectin-8 C-CRD in complex with NDP52	4gxl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00214;	371-381	100	2×GOL;
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Crystal structure of Galectin 8 with NDP52 peptide	4han PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00214;	372-380	100	2×NAD; 3×PEG;
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Skich domain of NDP52	3vvv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	21-132	100.0
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Crystal structure of NDP52 SKICH region	5z7a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	18-126	100.0	1×SO4; 1×DTT; 1×GOL;
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TBK1 recruitment to cytosol-invading Salmonella induces anti- bacterial autophagy	5aaq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	390-446	100	1×ZN;
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Solution structure of NDP52 ubiquitin-binding zinc finger	2mxp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	414-446	100	1×ZN;
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11 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
3vvv.1.A	monomer	0.74	21-132	100.00
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8p4y.1.A	monomer	0.62	205-347	22.66
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6ian.1.A	monomer	0.61	161-272	12.50
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8j07.857.A	monomer	0.60	216-350	17.19
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6f1t.1.h	monomer	0.57	140-340	17.11
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6z6o.1.D	monomer	0.57	137-267	12.10
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8glv.891.A	monomer	0.56	221-344	17.52
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2v71.1.B	monomer	0.56	162-335	20.24
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8bd7.1.G	monomer	0.55	141-276	17.91
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8bd7.1.S	monomer	0.53	139-269	19.05
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7r5j.94.A	monomer	0.51	142-275	17.42
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

39 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	3vvv.1.B	homo-2-mer	0.69	21-132	99.17
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Isoform 2	7utl.1.T	monomer	0.64	158-306	11.97
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Isoform 2	8iah.1.6	monomer	0.62	158-308	13.19
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Isoform 2	6z6f.1.C	monomer	0.62	159-288	14.62
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Isoform 2	8j07.78.A	monomer	0.62	158-315	16.46
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Isoform 2	8glv.456.A	monomer	0.61	160-314	20.65
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Isoform 2	3o0z.1.A	homo-2-mer	0.59	189-308	12.93
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Isoform 2	6l5j.2.A	homo-2-mer	0.51	142-308	23.35
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Isoform 3	8auc.2.A	monomer	0.67	175-371	10.88
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Isoform 3	7dl2.1.D	monomer	0.63	204-371	11.48
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Isoform 3	7dl2.1.A	monomer	0.62	204-371	11.48
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Isoform 3	8p4y.1.A	monomer	0.60	226-368	22.66
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Isoform 3	4nlh.1.A	monomer	0.56	21-149	50.83
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Isoform 3	6f1t.1.h	monomer	0.55	161-361	17.11
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Isoform 3	8bd7.1.G	monomer	0.55	162-297	17.91
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Isoform 3	2v71.1.B	monomer	0.54	183-356	20.24
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Isoform 3	8tid.1.T	monomer	0.53	155-368	14.22
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Isoform 3	8bd7.1.S	monomer	0.53	160-290	19.05
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Isoform 3	8glv.891.A	monomer	0.53	242-365	17.52
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Isoform 4	8auc.2.A	monomer	0.64	178-374	10.88
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Isoform 4	7dl2.1.D	monomer	0.64	207-374	11.48
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Isoform 4	7dl2.1.A	monomer	0.61	207-374	11.48
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Isoform 4	8p4y.1.A	monomer	0.60	229-371	22.66
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Isoform 4	4nlh.1.A	monomer	0.58	21-152	50.83
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Isoform 4	6f1t.1.h	monomer	0.57	164-364	17.11
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Isoform 4	8bd7.1.G	monomer	0.55	165-300	17.91
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Isoform 4	8tid.1.T	monomer	0.55	158-371	14.22
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Isoform 4	8bd7.1.S	monomer	0.54	163-293	19.05
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Isoform 4	2v71.1.B	monomer	0.53	186-359	20.24
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Isoform 4	8glv.891.A	monomer	0.53	245-368	17.52
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Isoform 5	4lin.1.A	monomer	0.65	63-196	6.92
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Isoform 5	8p4y.1.A	monomer	0.64	133-275	22.66
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Isoform 5	6ian.2.A	monomer	0.63	89-201	12.39
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Isoform 5	8j07.857.A	monomer	0.63	144-278	17.19
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Isoform 5	6f1t.1.h	monomer	0.60	68-268	17.65
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Isoform 5	2v71.1.B	monomer	0.58	91-263	20.36
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Isoform 5	7eaa.1.D	monomer	0.57	1-54	100.00
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Isoform 5	8bd7.1.G	monomer	0.57	72-204	18.32
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Isoform 5	8glv.420.A	monomer	0.50	62-276	15.63
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Q13137 (CACO2_HUMAN) Homo sapiens (Human)

Calcium-binding and coiled-coil domain-containing protein 2 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

10 Experimental Structures

11 SWISS-MODEL models

39 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Calcium-binding and coiled-coil domain-containing protein 2 UniProtKB InterPro STRING Interactive Modelling