Q9BY41 (HDAC8_HUMAN) Homo sapiens (Human)
Histone deacetylase 8 UniProtKBInterProSTRINGInteractive Modelling
377 aa; Sequence (Fasta) ; (Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8);
3 identical sequences: Pan troglodytes: A0A2I3TSB3, A0A6D2XN81; Pan paniscus: A0A2R8ZNP2
It is possible new templates exist for this target since these models were created.
Available Structures
53 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Crystal structure of HDAC8-substrate complex |
Heteromer P04637; | 99.72 | 2×K; 1×ZN; | |||
| Crystal Structure Analysis of human HDAC8 H143A variant complexed with substrate. | homo-4-mer | 99.72 | 6×ZN; 8×K; 4×MCM; | |||
| Crystal structure of C153F HDAC8 in complex with SAHA | homo-2-mer | 99.72 | 2×ZN; 4×K; 2×SHH; 2×GOL; | |||
| Crystal Structure of Human HDAC8 complexed with CRA-19156 | homo-2-mer | 100.0 | 2×ZN; 2×NA; 2×CRI; | |||
| HDAC8 Complexed with a Hydroxamic Acid | monomer | 100.0 | 1×5YA; 1×ZN; 1×K; 1×P6G; | |||
| Crystal structure of H334R HDAC8 in complex with M344 | monomer | 99.73 | 1×B3N; 1×ZN; 2×K; 3×GOL; | |||
| Crystal structure of H334R/Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 2×K; 1×MCM; 1×GOL; | |||
| Crystal Structure Analysis of Human HDAC8 complexed with trichostatin A in a new monoclinic crystal… | monomer | 100.0 | 1×ZN; 2×K; 2×TSN; | |||
| Crystal structure of HDAC8 in complex with compound 3 | monomer | 100 | 1×M8G; 1×ZN; 2×K; 3×GOL; | |||
| Crystal Structure Analysis of Human HDAC8 complexed with APHA in a new monoclinic crystal form | monomer | 100 | 2×ZN; 2×K; 1×AGE; | |||
| Crystal structure of D233G-Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 2×K; 1×ZN; | |||
| Crystal structure of human histone deacetylase 8 (HDAC8) I45T mutation complexed with SAHA | monomer | 99.72 | 1×ZN; 2×K; 1×SHH; 4×EDO; | |||
| Crystal structure of S39E HDAC8 in complex with Droxinostat | monomer | 99.72 | 1×ZN; 2×K; 1×XCH; | |||
| Crystal structure of A188T/Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 2×K; 1×GOL; 1×MG; 1×MCM; | |||
| Crystal structure of S39D HDAC8 in complex with a largazole analogue. | monomer | 99.72 | 1×L6G; 1×ZN; 2×K; 1×IMD; 1×GOL; | |||
| Crystal Structure Analysis of human HDAC8 D101L variant | monomer | 99.72 | 2×K; 1×ZN; 1×B3N; 1×BME; 3×GOL; | |||
| Crystal structure of D101L Mn2+ HDAC8 complexed with M344 | monomer | 99.72 | 1×MN; 2×K; 1×B3N; 1×GOL; | |||
| Crystal Structure of G302A HDAC8 in complex with M344 | monomer | 99.72 | 1×ZN; 2×K; 1×B3N; 7×EDO; | |||
| Crystal Structure of human HDAC8 complexed with Trichostatin A | monomer | 100 | 1×ZN; 2×CA; 2×NA; 2×TSN; | |||
| Crystal structure of D101L Co2+ HDAC8 complexed with M344 | monomer | 99.72 | 1×CO; 2×K; 1×B3N; 1×GOL; | |||
| Crystal structure of D176N HDAC8 in complex with M344 | monomer | 99.72 | 1×K; 1×B3N; 1×ZN; | |||
| Crystal Structure of G304A HDAC8 in complex with M344 | monomer | 99.72 | 1×ZN; 2×K; 1×B3N; | |||
| Crystal Structure of Human HDAC8 Inhibitor Complex, an Amino Acid Derived Inhibitor | monomer | 100.0 | 1×0DI; 2×K; 1×ZN; | |||
| Crystal structure of D101L Fe2+ HDAC8 complexed with M344 | monomer | 99.72 | 1×FE2; 2×K; 1×B3N; | |||
| Crystal structure of P91L-Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 2×K; | |||
| Crystal structure of I243N/Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 2×K; 1×GOL; 1×MCM; | |||
| Crystal structure of a human HDAC8 L6 loop mutant complexed with Quisinostat | monomer | 98.63 | 1×ZN; 2×K; 1×GOK; | |||
| Ideal Thiolate-Zinc Coordination Geometry in Depsipeptide Binding to Histone Deacetylase 8 | monomer | 100.0 | 1×ZN; 2×K; | |||
| Crystal structure of S39D HDAC8 in complex with a largazole analogue. | monomer | 99.72 | 1×ZN; 2×K; 1×L8G; 1×IMD; 1×GOL; | |||
| Crystal structure of D176A-Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 1×K; 1×GOL; | |||
| Crystal Structure of Human HDAC8 complexed with MS-344 | monomer | 100.0 | 1×ZN; 2×NA; 1×B3N; | |||
| Crystal structure of I243N HDAC8 in complex with SAHA | monomer | 99.72 | 2×K; 1×ZN; 1×SHH; | |||
| Crystal Structure of G303A HDAC8 in complex with M344 | monomer | 99.72 | 1×B3N; 1×ZN; 2×K; 6×EDO; | |||
| Crystal Structure Analysis of Human HDAC8 D101A Variant. | monomer | 99.72 | 1×ZN; 2×K; 1×B3N; 1×BME; | |||
| Crystal Structure Analysis of human HDAC8 D101N variant | monomer | 99.72 | 1×ZN; 2×K; 1×B3N; 1×BME; | |||
| Crystal Structure of Human HDAC8 Inhibitor Complex, an Amino Acid Derived Inhibitor | monomer | 100.0 | 2×K; 1×ZN; 3×ACT; 1×1DI; | |||
| Crystal structure of HDAC8 in complex with compound 30 | monomer | 100 | 1×ZN; 2×K; 1×M7Y; 3×EDO; | |||
| Crystal Structure Analysis of Human HDAC8 D101E Variant | monomer | 99.72 | 1×ZN; 2×K; 1×B3N; 1×BME; | |||
| Crystal structure of T311M HDAC8 in complex with Trichostatin A (TSA) | monomer | 99.72 | 1×TSN; 1×ZN; 2×K; 2×GOL; | |||
| Crystal structure of HDAC8 in complex with compound 2 | monomer | 100 | 1×C7; 1×ZN; 2×K; | |||
| Crystal structure of G117E HDAC8 in complex with TSA | monomer | 99.72 | 1×ZN; 2×K; 1×TSN; | |||
| Crystal Structure of human HDAC8 complexed with SAHA | monomer | 100.0 | 1×ZN; 1×SHH; | |||
| Crystal structure of Co2+ HDAC8 complexed with M344 | monomer | 100.0 | 1×CO; 2×K; 1×B3N; | |||
| Crystal structure of H142A-Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 2×K; 1×GOL; | |||
| Crystal structure of D176N-Y306F HDAC8 in complex with a tetrapeptide substrate | monomer | 99.45 | 1×ZN; 1×K; 1×GOL; | |||
| Crystal structure of A188T HDAC8 in complex with M344 | monomer | 99.72 | 2×K; 1×ZN; 1×B3N; 1×GOL; | |||
| Crystal structure of HDAC8-inhibitor complex | monomer | 99.72 | 1×ZN; 2×K; 1×V5X; | |||
| Crystal structure of S39D HDAC8 in complex with a largazole analogue. | monomer | 99.71 | 1×ZN; 2×K; 1×L7G; | |||
| Crystal structure of human histone deacetylase 8 (HDAC8) G320R mutation complexed with M344 | monomer | 99.72 | 1×B3N; 1×ZN; 2×K; | |||
| Crystal structure of inhibited human HDAC8 | monomer | 100.0 | 1×ZN; 2×K; 1×NHB; | |||
| Crystal structure of human histone deacetylase 8 (HDAC8) E66D/Y306F double mutation complexed with … | monomer | 99.45 | 4×EDO; 1×ZN; 2×K; 1×GOL; | |||
| Crystal Structure of G305A HDAC8 in complex with M344 | monomer | 99.71 | 1×ZN; 2×K; 1×B3N; 14×EDO; | |||
| Crystal structure of histone deacetylase 8 in complex with trapoxin A | monomer | 100.0 | 1×ZN; 2×K; 10×EDO; 2×DIO; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5fcw.1.A | monomer | 0.93 | 1×5YA; 1×ZN; 1×K; | 100.00 | ||
5 SWISS-MODEL models built on isoform sequence
| Isoform | Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|---|
| Isoform 4 | 3ew8.1.A | monomer | 0.88 | 2×K; 1×ZN; | 98.25 | ||
| Isoform 5 | 2v5w.1.A | monomer | 0.90 | 2×K; | 96.48 | ||
| Isoform 6 | 5d1b.1.A | monomer | 0.54 | 87.05 | |||
| Isoform 7 | 4qa7.1.A | monomer | 0.84 | 94.84 | |||
| Isoform 8 | 5dc6.1.A | monomer | 0.85 | 100.00 | |||