Q9RSW6 | SWISS-MODEL Repository

Q9RSW6 (RL35_DEIRA) Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)

Large ribosomal subunit protein bL35 UniProtKB InterPro STRING Interactive Modelling

66 aa; Sequence (Fasta) ; 1 identical sequence: Deinococcus reticulitermitis: A0A1H6T8A1

It is possible new templates exist for this target since these models were created.

Available Structures

27 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans	5dm6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSS8; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-66	100	198×MG;
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Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromy…	5dm7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSS8; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-66	100	186×MG; 1×HGR;
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Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans	2zjr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	35×MG;
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Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans	1nkw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;	2-64	100
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Crystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radiodurans	4io9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	35×MG; 1×1F2;
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Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans	4ioa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	35×MG; 1×1F3;
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50S Deinococcus radiodurans ribosome bounded with mycinamicin I	7a0s PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	1×QU2; 367×MG; 8×SPD; 4×MPD; 1×NA; 1×EOH; 5×CA; 1×K;
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Thiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radiodurans	3cf5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0C8P8; P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	36×MG;
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Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit	2zjq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RST0; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100
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COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN	1nwy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;	2-64	100	2×ZIT;
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50S Deinococcus radiodurans ribosome bounded with mycinamicin I	7a0r PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	1×QTZ; 345×MG;
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50S Deinococcus radiodurans ribosome bounded with mycinamicin IV	7a18 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	1×MIV; 277×MG; 7×SPD;
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COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRIS…	1sm1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;	2-64	100	1×DOL;
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COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH ABT-773	1nwx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;	2-64	100	1×773;
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Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit …	1xbp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RW44; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY49; Q9RY64; Q9RY65;	2-64	100	1×MUL;
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The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA pos…	3dll PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	35×MG; 1×ZLD; 2×ZN;
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Crystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radiodurans	4ioc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	35×MG; 1×1F4;
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Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans	2zjp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer C6FX52; P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	2-64	100	2×ZN; 1×NO1; 35×MG;
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Crystal structure of the whole ribosomal complex.	4v4r PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02417; P0DOY6; P0DOY7; P0DOY9; P10971; P10972; P12732; P12735; P12737; P14116; P14123; P14124; P17291; P20279; P29198; P29395; P49228; P80371; P80372; P80373; P80374; P80376; P80377; P80380; P96077; Q5L3Z4; Q5L408; Q5L413; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHP3; Q5SHQ5; Q5SHQ6; Q5SIH3; Q5SJ76; Q5SJH3; Q5SLP8; Q5SLQ0; Q9RSH2; Q9RSK0; Q9RSS4; Q9RSW7; Q9RW44; Q9RX88; Q9RY64; Q9RY65; Q9Z9H5;	2-64	100
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Crystal structure of the whole ribosomal complex with a stop codon in the A-site.	4v4t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02417; P0DOY6; P0DOY7; P0DOY9; P10971; P10972; P12732; P12735; P12737; P14116; P14123; P14124; P17291; P20279; P29198; P29395; P49228; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5L3Z4; Q5L408; Q5L413; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHP3; Q5SHQ5; Q5SHQ6; Q5SIH3; Q5SJ76; Q5SJH3; Q5SLP8; Q5SLQ0; Q9RSH2; Q9RSK0; Q9RSS4; Q9RSW7; Q9RW44; Q9RX88; Q9RY64; Q9RY65; Q9Z9H5;	2-64	100
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Crystal structure of the whole ribosomal complex.	4v4s PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02417; P0DOY6; P0DOY7; P0DOY9; P10971; P10972; P12732; P12735; P12737; P14116; P14123; P14124; P17291; P20279; P29198; P29395; P49228; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5L3Z4; Q5L408; Q5L413; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHP3; Q5SHQ5; Q5SHQ6; Q5SIH3; Q5SJ76; Q5SJH3; Q5SLP8; Q5SLQ0; Q5SM01; Q9RSH2; Q9RSK0; Q9RSS4; Q9RSW7; Q9RW44; Q9RX88; Q9RY64; Q9RY65; Q9Z9H5;	2-64	100
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Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the …	3pio PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	6-64	100	1×LMA; 154×MG; 42×NA; 15×K;
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The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin	5jvg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	6-64	100	1×6NO; 446×MG; 5×MPD; 3×SPD;
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Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the …	3pip PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK0; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSS7; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	6-64	100	1×LC2; 1×LMA; 73×MG; 4×K; 5×NA;
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Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a thre…	4wfn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	6-64	100	70×MG; 1×ERY;
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The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with ever…	5jvh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	6-64	100	1×6O1; 123×MG;
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Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a thre…	4u67 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49228; Q9RRG8; Q9RSH2; Q9RSJ5; Q9RSK9; Q9RSL0; Q9RSL2; Q9RSL3; Q9RSS4; Q9RSW7; Q9RWB4; Q9RX88; Q9RXJ0; Q9RXJ1; Q9RXJ2; Q9RXJ4; Q9RXJ5; Q9RXJ7; Q9RXJ9; Q9RXK0; Q9RXK1; Q9RXK2; Q9RXY1; Q9RY64; Q9RY65;	6-64	100	51×MG;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	5jvh.1.1	monomer	0.53	6-64		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Q9RSW6 (RL35_DEIRA) Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)

Large ribosomal subunit protein bL35 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

27 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Large ribosomal subunit protein bL35 UniProtKB InterPro STRING Interactive Modelling