Q9UBC3 (DNM3B_HUMAN) Homo sapiens (Human)

DNA (cytosine-5)-methyltransferase 3B UniProtKBInterProSTRINGInteractive Modelling

853 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; ) Identical sequences: Pan troglodytes: A0A2I3SYU8; Pan paniscus: A0A2R9AZX9

Sequence Features

 651
 54R -> P (in dbSNP:rs17123590)VAR_033885 dbSNP
 270S -> P (in ICF1; dbSNP:rs121908947)VAR_022579 dbSNP
 527C -> R (in FSHD2)VAR_077527
 585A -> T (in ICF1; dbSNP:rs750849178)VAR_077528 dbSNP
 585A -> V (in ICF1)VAR_011506
 603A -> T (in ICF1; dbSNP:rs121908943)VAR_011499 dbSNP
 606V -> A (in ICF1; dbSNP:rs867732105)VAR_011507 dbSNP
 663G -> S (in ICF1; dbSNP:rs121908942)VAR_011500 dbSNP
 664L -> P (in ICF1)VAR_022580
 691P -> L (in FSHD2; dbSNP:rs889145646)VAR_077529 dbSNP
 699V -> G (in ICF1)VAR_011508
 726V -> G (in ICF1; dbSNP:rs121908941)VAR_011501 dbSNP
 766A -> P (in ICF1; dbSNP:rs1191203668)VAR_011509 dbSNP
 806E -> ESTP (in ICF1)VAR_011502
 814H -> R (in ICF1; dbSNP:rs1219696128)VAR_011510 dbSNP
 817D -> G (in ICF1; dbSNP:rs121908939)VAR_011503 dbSNP
 818V -> M (in ICF1; dbSNP:rs121908940)VAR_011504 dbSNP
 836V -> M (in ICF1; unknown pathological significance; dbSNP:rs866792483)VAR_077530 dbSNP
 840R -> Q (in ICF1; dbSNP:rs121908946)VAR_022581 dbSNP
 434-464GATA-type; atypical
 475-531PHD-type; atypical
 224-309PWWP domain
IPR000313PF00855
 416-471DNMT3, cysteine rich ADD domain
IPR040552PF17980
 575-708C-5 cytosine methyltransferase
IPR001525PF00145

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Structural basis of the recognition of H3K36me3 by DNMT3B PWWP domain Heteromer
Q71DI3;
GOL;5ciu216-351
Human DNMT3B PWWP domain in complex with 5-[(2-Hydroxyethyl)(propyl)amino]-1-pentanolhomo-2-mer 96E;SO4;5nrr213-351
Human DNMT3B PWWP domain in complex with N-isopropyl-1,5-dimethylhexylamine (Metron S)homo-2-mer 9AE;SO4;5nv2215-351
Human DNMT3B PWWP domain in complex with N,N-bis(2-hydroxypropyl)ethanolaminehomo-2-mer SO4;962;5nrs215-351
Human DNMT3B PWWP domain in complex with 4-(dipropylamino)butyronitrilehomo-2-mer 9AH;SO4;5nv0215-351
Human DNMT3B PWWP domain in complex with 6-dipropylamino-1-hexanolhomo-2-mer 10×SO4;96K;5nrv216-350
'The PWWP domain of human DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3 BETA in complex with a bis-tris m...monomer SO4;BTB;3qkj215-351
Human DNMT3B PWWP domain in complex with N1-(2-hydroxyethyl)-2-methyl-1,2-propanediaminemonomer SO4;9AK;5nv7215-351
The PWWP domain of Human DNA (cytosine-5-)-methyltransferase 3 betamonomer 3flg216-350
Human DNMT3B PWWP domain in complex with ethambutolmonomer 95E;SO4;5nr3216-350
Human DNMT3B PWWP domain in complex with cholinemonomer CHT;SO4;5nvo216-350

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer ZN;SAH;-3.094u7t.1.A417-852
70.87
monomer ZN;SAH;-3.324u7p.1.A415-852
70.23

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
5monomer0.043flg.1.A216-350
100.00
8monomer-0.013flg.1.A174-308
100.00
2monomer0.043flg.1.A216-350
100.00
3monomer0.043flg.1.A216-350
100.00
7monomer0.033flg.1.A140-274
100.00
6monomer0.043flg.1.A228-362
100.00
4monomer-0.521khc.1.A216-350
93.88
2monomerZN;SAH;-3.114u7t.1.A397-832
70.87
6monomerZN;SAH;-3.114u7t.1.A409-844
70.87
2monomerZN;SAH;-3.324u7p.1.A395-832
70.23
6monomerZN;SAH;-3.324u7p.1.A407-844
70.23
4monomerZN;-2.574u7p.1.A395-723
67.37
7monomerZN;SAH;-3.494u7p.1.A319-694
68.11
3monomerZN;SAH;-3.474u7p.1.A395-770
68.11
8monomerZN;SAH;-3.484u7p.1.A353-728
67.86
7monomerZN;SAH;-2.934u7t.1.A321-694
70.59
8monomerZN;SAH;-2.934u7t.1.A355-728
70.59
3monomerZN;SAH;-2.924u7t.1.A397-770
70.59
4monomerZN;-1.894u7t.1.A397-723
68.20
5monomerZN;-2.904u7t.1.A397-791
62.28
5monomerZN;-3.814u7p.1.A395-791
60.29