Q9UBN7 (HDAC6_HUMAN) Homo sapiens (Human)

Histone deacetylase 6 UniProtKBInterProSTRINGInteractive Modelling

1215 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Homo sapiens: A0A024QZ26

Sequence Features

 2161.
 6112.
 1113Zinc 1.
 1115Zinc 1.
 1133Zinc 3.
 1136Zinc 3.
 1145Zinc 2.
 1148Zinc 2.
 1153Zinc 3.
 1160Zinc 3.
 1164Zinc 2.
 1170Zinc 2.
 1183Zinc 1.
 1186Zinc 1.
 994T -> I (in dbSNP:rs1127346). VAR_046300 dbSNP
 1200N -> D (in dbSNP:rs151130423). VAR_068962 dbSNP
 1131-1192UBP-type.
 106-401Histone deacetylase domain
IPR023801PF00850
 500-797Histone deacetylase domain
IPR023801PF00850
 1133-1193Zinc finger, UBP-type
IPR001607PF02148

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal structure of human HDAC6 in complex with ubiquitin Heteromer
P0CG47;
12×ZN;3phd1109-1210
'Crystal structure of human histone deacetylase 6 catalytic domain 2 in complex with trichostatin A'monomer TSN;ZN;K;MAL;5edu479-835
Crystal structure of human HDAC6 zinc finger domainmonomer ZN;3c5k1109-1215
Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoi...monomer ZN;9ZV;CL;UNX;FMT;ACT;5wbn1108-1209
Crystal structure of a low occupancy fragment candidate (N-(4-Methyl-1,3-thiazol-2-yl)propanamide...monomer 36×UNX;NA;ZN;FMT;6T4;5b8d1109-1208
Crystal structure of a low occupancy fragment candidate (5-[(4-Isopropylphenyl)amino]-6-methyl-1,...monomer 33×UNX;NA;ZN;6T5;FMT;5kh91109-1208
Crystal structure of fragment 2-(Benzo[d]thiazol-2-yl)acetic acid bound in the ubiquitin binding ...monomer UNX;ZN;EYV;6ce81109-1208
Crystal structure of fragment 3-(3-(pyridin-2-ylmethoxy)quinoxalin-2-yl)propanoic acid bound in t...monomer 17×UNX;B8P;ZN;5wpb1109-1208
Crystal structure of fragment (3-(5-Chloro-1,3-benzothiazol-2-yl)propanoic acid) bound in the ubi...monomer 13×UNX;6U6;ZN;5kh31109-1208
Structure of HDAC6 zinc-finger ubiquitin binding domain soaked with 3,3'-(benzo[1,2-d:5,4-d']bis(...monomer UNX;EYP;ZN;6ce61109-1208
Crystal structure of fragment (3-[6-Oxo-3-(3-pyridinyl)-1(6H)-pyridazinyl]propanoic acid) bound i...monomer 15×UNX;ZN;6T7;5kh71109-1208
Crystal structure of fragment 3-(1,3-Benzothiazol-2-yl)propanoic acid bound in the ubiquitin bind...monomer UNX;ZN;EYJ;6cef1109-1208
Crystal structure of fragment 3-(3-Methoxy-2-quinoxalinyl)propanoic acid bound in the ubiquitin b...monomer UNX;ZN;EY7;6cec1109-1207
Crystal structure of fragment 3-(1-Methyl-2-oxo-1,2-dihydroquinoxalin-3-yl)propionic acid bound i...monomer UNX;ZN;EYM;6cee1109-1207
'Crystal structure of fragment 3-(quinolin-2-yl)propanoic acid bound in the ubiquitin binding poc...monomer UNX;EYY;ZN;6cea1109-1207
Crystal structure of fragment 3-(3-Methyl-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid bound i...monomer EYA;UNX;ZN;6ced1109-1207
Crystal structure of human HDAC6 zinc finger domain and ubiquitin C-terminal peptide RLRGGmonomer ZN;CA;3gv41109-1207

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer ZN;N4R;K;-2.245g0j.1.A76-865
56.65

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
2monomerZN;N4R;K;-2.125g0j.1.A1-684
59.40