Q9UBN7 (HDAC6_HUMAN) Homo sapiens (Human)
Histone deacetylase 6 UniProtKBInterProSTRINGInteractive Modelling
1215 aa; Sequence (Fasta) ; (Isoform 2)
It is possible new templates exist for this target since these models were created.
Available Structures
21 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| HDAC6 ZnF domain inhibitor - DARPin (Designed Ankyrin repeat protein) F10 |
Heteromer | 100 | 3×ZN; 3×EDO; | |||
| Crystal structure of human HDAC6 in complex with ubiquitin |
Heteromer P0CG47; | 100 | 12×ZN; | |||
| Crystal structure of human histone deacetylase 6 catalytic domain 2 in complex with trichostatin A | monomer | 100.0 | 1×GLC; 1×TSN; 1×ZN; 2×K; | |||
| Crystal structure of human HDAC6 zinc finger domain | monomer | 100 | 3×ZN; | |||
| Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic … | monomer | 99.02 | 3×ZN; 1×9ZV; 8×UNX; 3×FMT; 1×CL; 2×ACT; | |||
| Crystal structure of a low occupancy fragment candidate (N-(4-Methyl-1,3-thiazol-2-yl)propanamide) … | monomer | 100 | 3×ZN; 2×FMT; 1×6T4; 36×UNX; 1×NA; | |||
| Crystal structure of a low occupancy fragment candidate (5-[(4-Isopropylphenyl)amino]-6-methyl-1,2,… | monomer | 100 | 3×ZN; 1×FMT; 1×6T5; 33×UNX; 1×NA; | |||
| Crystal structure of fragment 2-(Benzo[d]thiazol-2-yl)acetic acid bound in the ubiquitin binding po… | monomer | 100 | 3×ZN; 4×UNX; 1×EYV; | |||
| Crystal structure of fragment 3-(3-(pyridin-2-ylmethoxy)quinoxalin-2-yl)propanoic acid bound in the… | monomer | 100 | 3×ZN; 1×B8P; 17×UNX; | |||
| Structure of HDAC6 zinc-finger ubiquitin binding domain soaked with 3,3'-(benzo[1,2-d:5,4-d']bis(th… | monomer | 100 | 3×ZN; 3×UNX; 1×EYP; | |||
| Crystal structure of fragment (3-(5-Chloro-1,3-benzothiazol-2-yl)propanoic acid) bound in the ubiqu… | monomer | 100 | 3×ZN; 13×UNX; 1×6U6; | |||
| Crystal structure of fragment (3-[6-Oxo-3-(3-pyridinyl)-1(6H)-pyridazinyl]propanoic acid) bound in … | monomer | 100 | 3×ZN; 1×6T7; 15×UNX; | |||
| Crystal structure of fragment 3-(1,3-Benzothiazol-2-yl)propanoic acid bound in the ubiquitin bindin… | monomer | 100 | 3×ZN; 3×UNX; 1×EYJ; | |||
| Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(benzylamino)-2-oxo… | monomer | 100 | 3×ZN; 1×ZU9; | |||
| Crystal structure of fragment 3-(3-Methoxy-2-quinoxalinyl)propanoic acid bound in the ubiquitin bin… | monomer | 100 | 3×ZN; 5×UNX; 1×EY7; | |||
| Crystal structure of fragment 3-(1-Methyl-2-oxo-1,2-dihydroquinoxalin-3-yl)propionic acid bound in … | monomer | 100 | 3×ZN; 1×EYM; 4×UNX; | |||
| Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(methylamino)-2-oxo… | monomer | 100 | 3×ZN; 1×ZU6; | |||
| Crystal structure of fragment 3-(quinolin-2-yl)propanoic acid bound in the ubiquitin binding pocket… | monomer | 100 | 3×ZN; 3×UNX; 1×EYY; | |||
| Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with SGC-UBD253 chemical probe | monomer | 100 | 3×ZN; 1×ZUE; | |||
| Crystal structure of fragment 3-(3-Methyl-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid bound in … | monomer | 100 | 3×ZN; 1×EYA; 1×UNX; | |||
| Crystal structure of human HDAC6 zinc finger domain and ubiquitin C-terminal peptide RLRGG | monomer | 100 | 3×ZN; 1×CA; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5g0j.1.A | monomer | 0.82 | 1×ZN; 3×K; 1×N4R; | 57.27 | ||
2 SWISS-MODEL models built on isoform sequence
| Isoform | Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|---|
| Isoform 2 | 7qno.1.A | monomer | 0.82 | 2×K; 1×ZN; | 59.31 | ||
| Isoform 2 | 7u59.1.A | monomer | 0.61 | 1×ZN; | 37.82 | ||