Q9UHX1 | SWISS-MODEL Repository

Q9UHX1 (PUF60_HUMAN) Homo sapiens (Human)

Poly(U)-binding-splicing factor PUF60 UniProtKB InterPro STRING Interactive Modelling

559 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6); 13 identical sequences

Available Structures

16 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Solution structure of the first two RRM domains of FIR in the complex with FBP Nbox peptide	2kxh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q96AE4;	119-314	100
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Human PUF60 UHM domain (thioredoxin fusion) in complex with a small molecule binder	6lur PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-8-mer	460-559	100	8×EVU;
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Two Tandem RRM Domains of PUF60 Bound to an AdML Pre-mRNA 3' Splice Site Analogue with a Modified B…	5kw6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	118-314	98.48
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Crystal Structure of First Two RRM Domains of FIR Bound to ssDNA from a Portion of FUSE	2qfj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	118-312	98.44
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Crystal Structure of the Two Tandem RRM Domains of PUF60 Bound to a Modified AdML Pre-mRNA 3' Splic…	5kw1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	118-311	98.45	1×CL;
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CRYSTAL STRUCTURE OF THE TWO TANDEM RRM DOMAINS OF PUF60 BOUND TO A PORTION OF AN ADML PRE-MRNA 3' …	5kvy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	118-310	98.44	1×CL;
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Structure of the UHM domain of Puf60 fused to thioredoxin	3dxb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	460-559	100	2×CL;
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Crystal structure of a RNA binding domain of poly-U binding splicing factor 60KDa (PUF60) from Homo…	3uwt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	118-313	100	1×CL;
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Solution structure of the first two RRM domains of FBP-interacting repressor (FIR)	2kxf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	119-314	100
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Crystal structure of FIR RRM1-2 Y115F mutant bound to FUSE ssDNA	7z3x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	114-308	99.49	2×EDO;
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Crystal structure of tandem domain RRM1-2 of FUBP-interacting repressor (FIR) bound to FUSE ssDNA f…	7q8a PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	114-307	100
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Two Tandem RRM Domains of FBP-Interacting Repressor (FIR), also Known as PUF60	5kwq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	118-311	98.4
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Crystal structure of a RNA binding domain of poly-U binding splicing factor 60KDa (PUF60) from Homo…	3ue2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	443-559	100	2×SO4;
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Crystal structure of a RNA-binding domain of a poly-U binding splicing factor 60KDa (PUF60) from Ho…	3us5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	443-559	100	1×CL;
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Solution structure of the third RNA binding domain of FBP-interacting repressor, SIAHBP1	2dny PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	454-559	100
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Crystal structure of PUF60 UHM domain in complex with 7,8 dimethoxyperphenazine	6slo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	460-559	100	2×MG;
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6 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7q8a.2.A	monomer	0.79	120-307	1×DG;	100.00
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4pkd.1.B	monomer	0.66	128-307		22.60
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9f4d.1.A	monomer	0.65	126-303		21.02
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8hk1.1.E	monomer	0.64	127-306		29.24
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6tr0.1.A	monomer	0.57	128-306		23.03
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2yh0.1.A	monomer	0.57	128-306		23.03
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

27 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	7q8a.2.A	monomer	0.80	106-290	1×DG;	100.00
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Isoform 2	6n7p.1.F	monomer	0.64	110-289		19.74
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Isoform 2	6tr0.1.A	monomer	0.56	108-289		22.65
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Isoform 2	3vf0.1.A	monomer	0.53	54-289		20.67
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Isoform 2	4p6q.1.A	monomer	0.52	33-288		17.98
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Isoform 3	7q8a.2.A	monomer	0.80	76-264	1×DG;	100.00
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Isoform 3	4pkd.1.B	monomer	0.66	85-265		22.47
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Isoform 3	8hk1.1.E	monomer	0.65	84-263		29.24
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Isoform 3	9f4k.1.A	monomer	0.63	83-261		21.02
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Isoform 3	2yh0.1.A	monomer	0.59	85-263		23.03
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Isoform 3	6tr0.1.A	monomer	0.58	85-263		23.03
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Isoform 4	5kw6.1.B	monomer	0.79	64-249		98.92
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Isoform 4	6n7p.1.F	monomer	0.65	67-246		19.74
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Isoform 4	6tr0.1.A	monomer	0.56	65-246		22.65
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Isoform 4	4p6q.1.A	monomer	0.52	11-245		18.48
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Isoform 5	7q8a.2.A	monomer	0.79	90-278	1×DG;	100.00
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Isoform 5	4pkd.1.B	monomer	0.66	99-279		22.47
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Isoform 5	8hk1.1.E	monomer	0.64	98-277		29.24
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Isoform 5	1pgz.1.B	monomer	0.63	98-279		21.14
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Isoform 5	2yh0.1.A	monomer	0.58	99-277		23.03
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Isoform 5	6tr0.1.A	monomer	0.57	99-277		23.03
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Isoform 6	5kw6.1.B	monomer	0.80	78-262		98.92
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Isoform 6	6n7p.1.F	monomer	0.65	81-260		19.91
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Isoform 6	6tr0.1.A	monomer	0.57	79-260		22.65
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Isoform 6	4p6q.1.A	monomer	0.53	25-259		18.48
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Isoform 6	3vf0.1.A	monomer	0.52	25-260		21.36
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Isoform 6	5tf6.1.A	monomer	0.50	24-258		16.36
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Q9UHX1 (PUF60_HUMAN) Homo sapiens (Human)

Poly(U)-binding-splicing factor PUF60 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

16 Experimental Structures

6 SWISS-MODEL models

27 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Poly(U)-binding-splicing factor PUF60 UniProtKB InterPro STRING Interactive Modelling