Q9ULU4 | SWISS-MODEL Repository

Q9ULU4 (ZMYD8_HUMAN) Homo sapiens (Human)

MYND-type zinc finger-containing chromatin reader ZMYND8 UniProtKB Protein Atlas InterPro STRING Interactive Modelling

1186 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; Isoform 12; Isoform 13; Isoform 14; Isoform 15; Isoform 16; Isoform 17; Isoform 18; Isoform 19; Isoform 20; Isoform 21; Isoform 22; Isoform 23)

Available Structures

5 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Crystal structure of ZMYND8 PHD-BROMO-PWWP tandem in complex with Drebrin ADF-H domain	5y1z PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q16643;	87-390	100.0	4×SO4; 3×ZN;
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Structural basis of RACK7 PHD to read a pediatric glioblastoma-associated histone mutation H3.3G34R	7cwh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P84243;	83-143	100	2×ZN;
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Crystal Structure of the leucine zipper of human PRKCBP1	5mq4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	952-1064	100	2×SO4; 4×ZN;
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Crystal structure of human ZMYND8 PHD-Bromo-PWWP domain	5b73 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	86-403	100.0	3×ZN;
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Crystal structure of the PHD-Bromo-PWWP cassette of human PRKCBP1	4cos PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	86-399	100.0	3×ZN; 2×DIO;
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3 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
5y1z.2.B	monomer	0.84	85-391	3×ZN;	100.00
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2fsa.1.A	monomer	0.63	86-253	2×ZN;	25.47
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4ybm.1.A	monomer	0.59	86-252	2×ZN;	31.33
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

63 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	5mq4.1.A	homo-2-mer	0.58	380-492	4×ZN;	100.00
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Isoform 3	5y1z.1.B	monomer	0.83	1-245	1×ZN;	100.00
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Isoform 3	6gyr.2.A	monomer	0.55	2-130		18.60
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Isoform 4	5mq4.1.A	homo-2-mer	0.56	530-642	4×ZN;	100.00
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Isoform 5	5y1z.2.B	monomer	0.83	80-386	3×ZN;	100.00
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Isoform 5	2fsa.1.A	monomer	0.63	81-248	2×ZN;	25.47
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Isoform 5	4ybm.1.A	monomer	0.60	81-247	2×ZN;	31.33
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Isoform 6	5y1z.1.B	monomer	0.82	1-245	1×ZN;	100.00
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Isoform 6	6gyr.2.A	monomer	0.54	2-129		18.75
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Isoform 6	5mq4.2.A	monomer	0.50	763-873	2×ZN;	100.00
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Isoform 7	5y1z.2.B	monomer	0.83	105-411	3×ZN;	100.00
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Isoform 7	2fsa.1.A	monomer	0.65	106-273	2×ZN;	25.47
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Isoform 7	4ybm.1.A	monomer	0.59	106-272	2×ZN;	31.33
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Isoform 8	5y1z.2.B	monomer	0.84	105-411	3×ZN;	100.00
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Isoform 8	2fsa.1.A	monomer	0.63	106-273	2×ZN;	25.47
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Isoform 8	4yc9.1.A	monomer	0.61	106-272	2×ZN;	31.33
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Isoform 8	5mq4.2.A	monomer	0.50	847-957	2×ZN;	100.00
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Isoform 9	5y1z.2.B	monomer	0.84	85-391	3×ZN;	100.00
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Isoform 9	2fsa.1.A	monomer	0.65	86-253	2×ZN;	25.47
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Isoform 9	4ybm.1.A	monomer	0.59	86-252	2×ZN;	31.33
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Isoform 10	5y1z.2.B	monomer	0.83	105-411	3×ZN;	100.00
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Isoform 10	2fsa.1.A	monomer	0.63	106-273	2×ZN;	25.47
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Isoform 10	4ybm.1.A	monomer	0.59	106-272	2×ZN;	31.33
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Isoform 11	5y1z.2.B	monomer	0.84	85-391	3×ZN;	100.00
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Isoform 11	2fsa.1.A	monomer	0.63	86-253	2×ZN;	25.47
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Isoform 11	4ybm.1.A	monomer	0.59	86-252	2×ZN;	31.33
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Isoform 12	5y1z.2.B	monomer	0.83	105-411	3×ZN;	100.00
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Isoform 12	2fsa.1.A	monomer	0.63	106-273	2×ZN;	25.47
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Isoform 12	3o33.2.A	monomer	0.62	106-272	2×ZN;	31.33
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Isoform 13	5y1z.2.B	monomer	0.84	105-411	3×ZN;	100.00
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Isoform 13	2fsa.1.A	monomer	0.63	106-273	2×ZN;	25.47
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Isoform 13	4ybm.1.A	monomer	0.59	106-272	2×ZN;	31.33
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Isoform 14	5y1z.2.B	monomer	0.83	80-386	3×ZN;	100.00
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Isoform 14	2fsa.1.A	monomer	0.63	81-248	2×ZN;	25.47
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Isoform 14	3o33.2.A	monomer	0.62	81-247	2×ZN;	31.33
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Isoform 14	5hda.1.A	monomer	0.61	919-1014	2×ZN;	38.95
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Isoform 15	5y1z.2.B	monomer	0.84	80-386	3×ZN;	100.00
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Isoform 15	2fsa.1.A	monomer	0.63	81-248	2×ZN;	25.47
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Isoform 15	4ybm.1.A	monomer	0.61	81-247	2×ZN;	31.33
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Isoform 16	5y1z.2.B	monomer	0.83	80-386	3×ZN;	100.00
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Isoform 16	2fsa.1.A	monomer	0.63	81-248	2×ZN;	25.47
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Isoform 16	4ybm.1.A	monomer	0.60	81-247	2×ZN;	31.33
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Isoform 17	5y1z.2.B	monomer	0.84	80-386	3×ZN;	100.00
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Isoform 17	2fsa.1.A	monomer	0.63	81-247	2×ZN;	25.63
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Isoform 17	3o33.2.A	monomer	0.62	81-247	2×ZN;	31.33
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Isoform 18	5y1z.2.B	monomer	0.84	80-386	3×ZN;	100.00
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Isoform 18	2fsa.1.A	monomer	0.63	81-248	2×ZN;	25.47
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Isoform 18	4yc9.1.A	monomer	0.63	81-247	2×ZN;	31.33
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Isoform 19	5y1z.2.B	monomer	0.83	112-418	3×ZN;	100.00
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Isoform 19	2fsa.1.A	monomer	0.63	113-280	2×ZN;	25.47
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Isoform 19	4ybm.1.A	monomer	0.59	113-279	2×ZN;	31.33
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Isoform 20	5y1z.2.B	monomer	0.83	85-391	3×ZN;	100.00
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Isoform 20	2fsa.1.A	monomer	0.63	86-253	2×ZN;	25.47
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Isoform 20	4yc9.1.A	monomer	0.62	86-252	2×ZN;	31.33
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Isoform 21	5y1z.2.B	monomer	0.83	60-366	3×ZN;	100.00
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Isoform 21	2fsa.1.A	monomer	0.63	61-228	2×ZN;	25.47
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Isoform 21	4yc9.1.A	monomer	0.61	61-227	2×ZN;	31.33
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Isoform 22	5y1z.2.B	monomer	0.84	105-411	3×ZN;	100.00
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Isoform 22	2fsa.1.A	monomer	0.63	106-273	2×ZN;	25.47
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Isoform 22	4yc9.1.A	monomer	0.61	106-272	2×ZN;	31.33
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Isoform 23	5y1z.2.B	monomer	0.75	60-328	3×ZN;	100.00
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Isoform 23	4ybm.1.A	monomer	0.57	61-189	2×ZN;	38.28
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Isoform 23	2fsa.1.A	monomer	0.53	61-190		27.91
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Q9ULU4 (ZMYD8_HUMAN) Homo sapiens (Human)

MYND-type zinc finger-containing chromatin reader ZMYND8 UniProtKBProtein AtlasInterProSTRINGInteractive Modelling

Available Structures

5 Experimental Structures

3 SWISS-MODEL models

63 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

MYND-type zinc finger-containing chromatin reader ZMYND8 UniProtKB Protein Atlas InterPro STRING Interactive Modelling