SMTL ID : 1ahz.2 (1 other biounit)

STRUCTURE OF THE OCTAMERIC FLAVOENZYME VANILLYL-ALCOHOL OXIDASE IN COMPLEX WITH 4-(1-HEPTENYL)PHENOL

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: Y.51, L.171 Ligands: FAD.2 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain B: Y.51, L.171 Ligands: FAD.5 Ligand excluded by PLIP

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.2: 31 residues within 4Å: Chain A: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, L.171, G.174, S.175, G.178, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545 Ligands: CL.1, EPT.3 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.171, A:W.413, A:I.414 Hydrogen bonds: A:S.101, A:S.101, A:I.102, A:G.103, A:R.104, A:N.105, A:N.105, A:D.170, A:S.175, A:N.179, A:V.185, A:V.185, A:V.262, A:R.504, A:R.504, A:K.545 pi-Stacking: A:F.424 FAD.5: 30 residues within 4Å: Chain B: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, L.171, G.174, S.175, G.178, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545 Ligands: CL.4 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:L.171, B:W.413, B:I.414 Hydrogen bonds: B:S.101, B:S.101, B:I.102, B:G.103, B:R.104, B:N.105, B:N.105, B:D.170, B:D.170, B:S.175, B:N.179, B:E.182, B:V.185, B:V.185, B:Y.187, B:V.262, B:R.504, B:R.504, B:K.545 pi-Stacking: B:F.424

1 x EPT: HEPTANYL-P-PHENOL(Non-covalent)

EPT.3: 13 residues within 4Å: Chain A: Y.108, D.170, Y.187, T.310, R.312, R.398, E.410, F.424, T.457, I.468, Y.503, R.504 Ligands: FAD.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.108, A:R.312, A:F.424, A:T.457, A:I.468, A:I.468 Hydrogen bonds: A:Y.108, A:R.504 pi-Stacking: A:F.424

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mattevi, A. et al., Crystal structures and inhibitor binding in the octameric flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site cavity controls substrate specificity. Structure (1997)

Release Date

1997-10-15

Peptides

VANILLYL-ALCOHOL OXIDASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

VANILLYL-ALCOHOL OXIDASE

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