- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x ACT: ACETATE ION(Non-functional Binders)
- 8 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 4 residues within 4Å:- Chain A: P.169, D.170, L.171
- Ligands: FAD.3
Ligand excluded by PLIPCL.5: 3 residues within 4Å:- Chain B: P.169, L.171
- Ligands: FAD.6
Ligand excluded by PLIPCL.8: 4 residues within 4Å:- Chain C: P.169, D.170, L.171
- Ligands: FAD.9
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain D: P.169, L.171
- Ligands: FAD.12
Ligand excluded by PLIPCL.14: 4 residues within 4Å:- Chain E: P.169, D.170, L.171
- Ligands: FAD.15
Ligand excluded by PLIPCL.17: 3 residues within 4Å:- Chain F: P.169, L.171
- Ligands: FAD.18
Ligand excluded by PLIPCL.20: 4 residues within 4Å:- Chain G: P.169, D.170, L.171
- Ligands: FAD.21
Ligand excluded by PLIPCL.23: 3 residues within 4Å:- Chain H: P.169, L.171
- Ligands: FAD.24
Ligand excluded by PLIP- 8 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)
FAD.3: 29 residues within 4Å:- Chain A: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.1, CL.2
22 PLIP interactions:22 interactions with chain A- Hydrophobic interactions: A:W.413, A:F.424
- Hydrogen bonds: A:S.101, A:S.101, A:I.102, A:G.103, A:R.104, A:N.105, A:D.170, A:D.170, A:S.175, A:N.179, A:V.185, A:V.185, A:V.262, A:R.504, A:R.504, A:K.545
- Water bridges: A:W.98, A:G.110, A:K.545
- pi-Stacking: A:F.424
FAD.6: 29 residues within 4Å:- Chain B: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.4, CL.5
22 PLIP interactions:22 interactions with chain B- Hydrophobic interactions: B:W.413, B:F.424
- Hydrogen bonds: B:S.101, B:S.101, B:I.102, B:G.103, B:R.104, B:N.105, B:D.170, B:S.175, B:N.179, B:E.182, B:V.185, B:V.185, B:Y.187, B:V.262, B:R.504, B:R.504, B:K.545
- Water bridges: B:G.110, B:K.545
- pi-Stacking: B:F.424
FAD.9: 29 residues within 4Å:- Chain C: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.7, CL.8
22 PLIP interactions:22 interactions with chain C- Hydrophobic interactions: C:W.413, C:F.424
- Hydrogen bonds: C:S.101, C:S.101, C:I.102, C:G.103, C:R.104, C:N.105, C:D.170, C:D.170, C:S.175, C:N.179, C:V.185, C:V.185, C:V.262, C:R.504, C:R.504, C:K.545
- Water bridges: C:W.98, C:G.110, C:K.545
- pi-Stacking: C:F.424
FAD.12: 29 residues within 4Å:- Chain D: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.10, CL.11
22 PLIP interactions:22 interactions with chain D- Hydrophobic interactions: D:W.413, D:F.424
- Hydrogen bonds: D:S.101, D:S.101, D:I.102, D:G.103, D:R.104, D:N.105, D:D.170, D:S.175, D:N.179, D:E.182, D:V.185, D:V.185, D:Y.187, D:V.262, D:R.504, D:R.504, D:K.545
- Water bridges: D:G.110, D:K.545
- pi-Stacking: D:F.424
FAD.15: 29 residues within 4Å:- Chain E: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.13, CL.14
22 PLIP interactions:22 interactions with chain E- Hydrophobic interactions: E:W.413, E:F.424
- Hydrogen bonds: E:S.101, E:S.101, E:I.102, E:G.103, E:R.104, E:N.105, E:D.170, E:D.170, E:S.175, E:N.179, E:V.185, E:V.185, E:V.262, E:R.504, E:R.504, E:K.545
- Water bridges: E:W.98, E:G.110, E:K.545
- pi-Stacking: E:F.424
FAD.18: 29 residues within 4Å:- Chain F: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.16, CL.17
22 PLIP interactions:22 interactions with chain F- Hydrophobic interactions: F:W.413, F:F.424
- Hydrogen bonds: F:S.101, F:S.101, F:I.102, F:G.103, F:R.104, F:N.105, F:D.170, F:S.175, F:N.179, F:E.182, F:V.185, F:V.185, F:Y.187, F:V.262, F:R.504, F:R.504, F:K.545
- Water bridges: F:G.110, F:K.545
- pi-Stacking: F:F.424
FAD.21: 29 residues within 4Å:- Chain G: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.19, CL.20
22 PLIP interactions:22 interactions with chain G- Hydrophobic interactions: G:W.413, G:F.424
- Hydrogen bonds: G:S.101, G:S.101, G:I.102, G:G.103, G:R.104, G:N.105, G:D.170, G:D.170, G:S.175, G:N.179, G:V.185, G:V.185, G:V.262, G:R.504, G:R.504, G:K.545
- Water bridges: G:W.98, G:G.110, G:K.545
- pi-Stacking: G:F.424
FAD.24: 29 residues within 4Å:- Chain H: P.99, I.100, S.101, I.102, G.103, R.104, N.105, M.123, P.169, D.170, G.174, S.175, N.179, V.181, E.182, G.184, V.185, Y.187, G.260, I.261, V.262, W.413, I.414, H.422, F.424, R.504, K.545
- Ligands: ACT.22, CL.23
22 PLIP interactions:22 interactions with chain H- Hydrophobic interactions: H:W.413, H:F.424
- Hydrogen bonds: H:S.101, H:S.101, H:I.102, H:G.103, H:R.104, H:N.105, H:D.170, H:S.175, H:N.179, H:E.182, H:V.185, H:V.185, H:Y.187, H:V.262, H:R.504, H:R.504, H:K.545
- Water bridges: H:G.110, H:K.545
- pi-Stacking: H:F.424
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mattevi, A. et al., Crystal structures and inhibitor binding in the octameric flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site cavity controls substrate specificity. Structure (1997)
- Release Date
- 1997-10-15
- Peptides
- VANILLYL-ALCOHOL OXIDASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
BG
AH
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x ACT: ACETATE ION(Non-functional Binders)
- 8 x CL: CHLORIDE ION(Non-functional Binders)
- 8 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mattevi, A. et al., Crystal structures and inhibitor binding in the octameric flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site cavity controls substrate specificity. Structure (1997)
- Release Date
- 1997-10-15
- Peptides
- VANILLYL-ALCOHOL OXIDASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
BG
AH
B